Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1970

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,318,990	-		Echvi_1968	0.49	+0.2
2,319,011	+		Echvi_1968	0.52	-0.5
2,319,012	-		Echvi_1968	0.53	+1.9
2,319,034	+		Echvi_1968	0.56	-0.7
2,319,035	-		Echvi_1968	0.56	+0.3
2,319,054	+		Echvi_1968	0.58	-1.0
2,319,087	+		Echvi_1968	0.63	+0.6
2,319,111	+		Echvi_1968	0.66	+0.9
2,319,111	+		Echvi_1968	0.66	-4.0
2,319,112	-		Echvi_1968	0.66	+0.7
2,319,129	+		Echvi_1968	0.69	-3.2
2,319,149	+		Echvi_1968	0.72	+1.5
2,319,149	+		Echvi_1968	0.72	-1.7
2,319,150	-		Echvi_1968	0.72	+1.0
2,319,198	+		Echvi_1968	0.78	-1.9
2,319,198	+		Echvi_1968	0.78	+1.0
2,319,264	+		Echvi_1968	0.88	+2.5
2,319,264	+		Echvi_1968	0.88	-1.1
2,319,264	+		Echvi_1968	0.88	+1.4
2,319,265	-		Echvi_1968	0.88	+1.9
2,319,266	+		Echvi_1968	0.88	-1.9
2,319,269	+		Echvi_1968	0.88	+0.3
2,319,269	+		Echvi_1968	0.88	-3.2
2,319,269	+		Echvi_1968	0.88	+0.5
2,319,269	+		Echvi_1968	0.88	+1.2
2,319,296	-				+2.0
2,319,330	+				-0.3
2,319,330	+				-0.5
2,319,330	+				+1.4
2,319,344	-				+1.6
2,319,357	+				+3.5
2,319,372	+				+0.0
2,319,427	+				-0.5
2,319,435	+				+0.5
2,319,457	+				+2.6
2,319,457	+				+0.4
2,319,458	-				+0.7
2,319,458	-				+2.2
2,319,544	+				-1.1
2,319,545	-				+0.0
2,319,552	+		Echvi_1969	0.11	+2.4
2,319,579	+		Echvi_1969	0.18	+3.0
2,319,579	+		Echvi_1969	0.18	-1.4
2,319,579	+		Echvi_1969	0.18	+0.7
2,319,579	+		Echvi_1969	0.18	+0.6
2,319,668	-		Echvi_1969	0.38	+0.5
2,319,683	-		Echvi_1969	0.41	+0.8
2,319,688	+		Echvi_1969	0.42	-1.5
2,319,725	+		Echvi_1969	0.50	+1.1
2,319,725	+		Echvi_1969	0.50	+0.8
2,319,725	+		Echvi_1969	0.50	+2.7
2,319,726	-		Echvi_1969	0.51	-2.5
2,319,727	+		Echvi_1969	0.51	+1.8
2,319,728	-		Echvi_1969	0.51	-1.1
2,319,730	+		Echvi_1969	0.52	-1.7
2,319,730	+		Echvi_1969	0.52	+1.0
2,319,731	-		Echvi_1969	0.52	+1.7
2,319,746	+		Echvi_1969	0.55	-2.9
2,319,747	-		Echvi_1969	0.55	-3.3
2,319,747	-		Echvi_1969	0.55	+0.9
2,319,747	-		Echvi_1969	0.55	+0.9
2,319,747	-		Echvi_1969	0.55	-1.2
2,319,749	+		Echvi_1969	0.56	+1.9
2,319,749	+		Echvi_1969	0.56	-2.3
2,319,749	+		Echvi_1969	0.56	+0.6
2,319,749	+		Echvi_1969	0.56	+3.9
2,319,750	-		Echvi_1969	0.56	-0.1
2,319,750	-		Echvi_1969	0.56	+1.0
2,319,750	-		Echvi_1969	0.56	-0.1
2,319,751	+		Echvi_1969	0.56	+1.4
2,319,751	+		Echvi_1969	0.56	-2.5
2,319,752	-		Echvi_1969	0.57	-1.0
2,319,752	-		Echvi_1969	0.57	+0.2
2,319,752	-		Echvi_1969	0.57	+0.5
2,319,753	+		Echvi_1969	0.57	-1.7
2,319,753	+		Echvi_1969	0.57	-0.1
2,319,753	+		Echvi_1969	0.57	-0.7
2,319,753	+		Echvi_1969	0.57	-1.5
2,319,753	+		Echvi_1969	0.57	+1.4
2,319,753	+		Echvi_1969	0.57	+0.3
2,319,753	+		Echvi_1969	0.57	+0.1
2,319,753	+		Echvi_1969	0.57	-0.8
2,319,753	+		Echvi_1969	0.57	+0.1
2,319,753	+		Echvi_1969	0.57	-2.3
2,319,754	-		Echvi_1969	0.57	-0.1
2,319,754	-		Echvi_1969	0.57	-0.6
2,319,754	-		Echvi_1969	0.57	+0.1
2,319,754	-		Echvi_1969	0.57	+1.2
2,319,754	-		Echvi_1969	0.57	-0.2
2,319,754	-		Echvi_1969	0.57	-1.8
2,319,754	-		Echvi_1969	0.57	+2.5
2,319,754	-		Echvi_1969	0.57	-3.6
2,319,761	+		Echvi_1969	0.59	-1.5
2,319,761	+		Echvi_1969	0.59	-0.1
2,319,761	+		Echvi_1969	0.59	+1.7
2,319,766	+		Echvi_1969	0.60	-0.4
2,319,794	+		Echvi_1969	0.66	-3.6
2,319,794	+		Echvi_1969	0.66	-3.6
2,319,794	+		Echvi_1969	0.66	-0.5
2,319,795	-		Echvi_1969	0.66	-0.8
2,319,841	-		Echvi_1969	0.77	-2.9
2,319,863	+		Echvi_1969	0.82	-2.0
2,319,864	-		Echvi_1969	0.82	-1.3
2,319,865	+		Echvi_1969	0.82	-1.4
2,319,872	+		Echvi_1969	0.84	-3.4
2,319,874	+		Echvi_1969	0.84	+0.3
2,319,874	+		Echvi_1969	0.84	-0.5
2,319,943	-				-1.5
2,319,962	+				+0.3
2,319,963	-				+0.3
2,320,072	+		Echvi_1970	0.40	-1.9
2,320,072	+		Echvi_1970	0.40	-1.8
2,320,072	+		Echvi_1970	0.40	-3.0
2,320,073	-		Echvi_1970	0.41	-2.0
2,320,181	+		Echvi_1970	0.84	+1.3
2,320,217	+				+1.0
2,320,218	-				-0.4
2,320,218	-				+1.5
2,320,219	+				-3.0
2,320,219	+				+1.8
2,320,219	+				-1.0
2,320,220	-				+0.1
2,320,220	-				-3.0
2,320,220	-				+6.9
2,320,260	+				-0.4
2,320,261	-				-1.0
2,320,261	-				+5.1
2,320,267	+				-0.1
2,320,271	+				+1.3
2,320,271	+				-0.4
2,320,327	+				+2.1
2,320,327	+				+0.9
2,320,328	-				-2.0
2,320,328	-				+1.5
2,320,331	+				-2.8
2,320,332	-				-0.5
2,320,356	+				-0.3
2,320,359	-				-1.6
2,320,424	-		Echvi_1971	0.11	-0.8
2,320,446	+		Echvi_1971	0.13	-1.5
2,320,538	+		Echvi_1971	0.20	+1.5
2,320,569	+		Echvi_1971	0.22	+0.3
2,320,569	+		Echvi_1971	0.22	-0.5
2,320,570	-		Echvi_1971	0.22	-2.7
2,320,623	-		Echvi_1971	0.26	+0.4
2,320,648	-		Echvi_1971	0.28	-2.2
2,320,671	-		Echvi_1971	0.29	+0.9
2,320,671	-		Echvi_1971	0.29	-1.0
2,320,671	-		Echvi_1971	0.29	-3.5
2,320,671	-		Echvi_1971	0.29	+0.2
2,320,671	-		Echvi_1971	0.29	-2.1
2,320,705	+		Echvi_1971	0.32	+0.6
2,320,706	-		Echvi_1971	0.32	-1.7
2,320,711	-		Echvi_1971	0.32	+1.2
2,320,803	+		Echvi_1971	0.39	-3.6
2,320,803	+		Echvi_1971	0.39	-1.4
2,320,803	+		Echvi_1971	0.39	-0.1
2,320,803	+		Echvi_1971	0.39	+0.5
2,320,804	-		Echvi_1971	0.39	-0.7
2,320,804	-		Echvi_1971	0.39	-1.9
2,320,804	-		Echvi_1971	0.39	+0.4
2,320,804	-		Echvi_1971	0.39	-0.3
2,320,804	-		Echvi_1971	0.39	+1.0
2,320,804	-		Echvi_1971	0.39	+1.6
2,320,810	-		Echvi_1971	0.40	+1.8
2,320,810	-		Echvi_1971	0.40	-1.0
2,320,818	+		Echvi_1971	0.40	+1.0
2,320,840	-		Echvi_1971	0.42	-1.4
2,320,844	-		Echvi_1971	0.42	+0.8
2,320,881	+		Echvi_1971	0.45	-2.1
2,320,884	-		Echvi_1971	0.45	-0.7
2,320,900	-		Echvi_1971	0.46	+3.8
2,320,900	-		Echvi_1971	0.46	+0.8
2,320,903	+		Echvi_1971	0.46	+0.4
2,320,903	+		Echvi_1971	0.46	-2.6
2,320,904	-		Echvi_1971	0.47	-1.8
2,320,904	-		Echvi_1971	0.47	-2.3
2,320,924	-		Echvi_1971	0.48	-1.3
2,320,938	+		Echvi_1971	0.49	-1.7
2,320,957	+		Echvi_1971	0.50	-0.5
2,320,957	+		Echvi_1971	0.50	+1.3
2,320,957	+		Echvi_1971	0.50	-1.7
2,320,958	-		Echvi_1971	0.51	+2.0
2,321,029	+		Echvi_1971	0.56	+1.8
2,321,029	+		Echvi_1971	0.56	-0.5
2,321,029	+		Echvi_1971	0.56	+1.1
2,321,032	+		Echvi_1971	0.56	+2.0
2,321,032	+		Echvi_1971	0.56	+0.3
2,321,032	+		Echvi_1971	0.56	-0.1
2,321,032	+		Echvi_1971	0.56	-1.5
2,321,047	-		Echvi_1971	0.57	-1.9
2,321,072	+		Echvi_1971	0.59	+1.3
2,321,072	+		Echvi_1971	0.59	-0.7
2,321,164	+		Echvi_1971	0.66	+0.1
2,321,164	+		Echvi_1971	0.66	-3.3
2,321,166	+		Echvi_1971	0.66	+1.1
2,321,167	-		Echvi_1971	0.66	+0.9
2,321,167	-		Echvi_1971	0.66	-0.3
2,321,168	+		Echvi_1971	0.66	+1.0
2,321,168	+		Echvi_1971	0.66	+1.2
2,321,168	+		Echvi_1971	0.66	-2.7
2,321,168	+		Echvi_1971	0.66	+0.7
2,321,168	+		Echvi_1971	0.66	-1.1
2,321,169	-		Echvi_1971	0.66	-0.3
2,321,221	+		Echvi_1971	0.70	+1.3