Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1958

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,298,047	+		Echvi_1956	0.81	-0.5
2,298,048	-		Echvi_1956	0.82	+0.2
2,298,048	-		Echvi_1956	0.82	-1.5
2,298,048	-		Echvi_1956	0.82	+0.8
2,298,062	-		Echvi_1956	0.82	-0.1
2,298,163	+		Echvi_1956	0.87	+1.4
2,298,186	-		Echvi_1956	0.89	-0.9
2,298,186	-		Echvi_1956	0.89	-2.3
2,298,190	+		Echvi_1956	0.89	+2.7
2,298,190	+		Echvi_1956	0.89	-1.2
2,298,190	+		Echvi_1956	0.89	+0.3
2,298,190	+		Echvi_1956	0.89	+0.5
2,298,256	+				-1.5
2,298,256	+				+1.1
2,298,344	+				+0.7
2,298,379	+				+1.9
2,298,393	+				+0.6
2,298,393	+				+0.7
2,298,393	+				+0.1
2,298,393	+				-0.5
2,298,393	+				+1.1
2,298,395	+				+2.3
2,298,395	+				+1.7
2,298,409	+				-1.0
2,298,433	+				-0.3
2,298,433	+				+3.5
2,298,434	-				+0.7
2,298,437	+				+2.5
2,298,438	-				+0.3
2,298,472	-				-1.4
2,298,552	-				+0.5
2,298,552	-				-1.4
2,298,552	-				+1.0
2,298,552	-				+2.8
2,298,552	-				+0.8
2,298,552	-				+1.4
2,298,552	-				+1.5
2,298,571	-				+1.2
2,298,571	-				-2.3
2,298,572	+				+1.2
2,298,572	+				+1.1
2,298,573	-				-1.2
2,298,573	-				+0.3
2,298,575	+				+0.8
2,298,585	-				+1.3
2,298,613	+				+0.5
2,298,617	+				-3.0
2,298,618	-				+0.7
2,298,649	-				+2.8
2,298,656	-		Echvi_1957	0.10	-0.7
2,298,681	-		Echvi_1957	0.16	+1.1
2,298,687	+		Echvi_1957	0.18	+0.3
2,298,716	+		Echvi_1957	0.24	+0.7
2,298,716	+		Echvi_1957	0.24	+0.8
2,298,717	-		Echvi_1957	0.25	+0.4
2,298,717	-		Echvi_1957	0.25	-1.1
2,298,717	-		Echvi_1957	0.25	+0.5
2,298,720	-		Echvi_1957	0.25	+1.6
2,298,721	+		Echvi_1957	0.26	+0.4
2,298,753	+		Echvi_1957	0.33	+2.4
2,298,753	+		Echvi_1957	0.33	+0.2
2,298,754	-		Echvi_1957	0.33	+1.5
2,298,759	+		Echvi_1957	0.35	+1.7
2,298,761	+		Echvi_1957	0.35	-0.5
2,298,761	+		Echvi_1957	0.35	+0.8
2,298,761	+		Echvi_1957	0.35	+0.9
2,298,761	+		Echvi_1957	0.35	+2.1
2,298,761	+		Echvi_1957	0.35	+2.1
2,298,762	-		Echvi_1957	0.35	+0.9
2,298,762	-		Echvi_1957	0.35	-2.3
2,298,762	-		Echvi_1957	0.35	+0.9
2,298,762	-		Echvi_1957	0.35	+0.4
2,298,762	-		Echvi_1957	0.35	-3.0
2,298,762	-		Echvi_1957	0.35	+0.2
2,298,764	+		Echvi_1957	0.36	+2.0
2,298,764	+		Echvi_1957	0.36	-0.5
2,298,764	+		Echvi_1957	0.36	+1.3
2,298,765	-		Echvi_1957	0.36	+1.1
2,298,765	-		Echvi_1957	0.36	-1.4
2,298,770	+		Echvi_1957	0.37	-1.6
2,298,770	+		Echvi_1957	0.37	-0.8
2,298,770	+		Echvi_1957	0.37	+4.3
2,298,770	+		Echvi_1957	0.37	-2.5
2,298,772	+		Echvi_1957	0.38	+2.4
2,298,786	+		Echvi_1957	0.41	-1.6
2,298,832	+		Echvi_1957	0.52	-0.3
2,298,837	+		Echvi_1957	0.53	+1.5
2,298,842	+		Echvi_1957	0.54	-1.4
2,298,842	+		Echvi_1957	0.54	-2.6
2,298,842	+		Echvi_1957	0.54	-2.1
2,298,842	+		Echvi_1957	0.54	+1.0
2,298,842	+		Echvi_1957	0.54	+0.8
2,298,903	-		Echvi_1957	0.68	+1.1
2,298,909	-		Echvi_1957	0.70	-1.3
2,298,917	+		Echvi_1957	0.72	+1.7
2,298,920	+		Echvi_1957	0.72	-0.7
2,298,942	+		Echvi_1957	0.77	+1.2
2,298,942	+		Echvi_1957	0.77	-1.9
2,298,942	+		Echvi_1957	0.77	-0.0
2,299,008	+				-0.3
2,299,008	+				-1.5
2,299,008	+				+0.8
2,299,008	+				-0.5
2,299,008	+				+0.5
2,299,009	-				+1.5
2,299,010	+				-0.9
2,299,011	-				+1.0
2,299,012	+				-0.2
2,299,019	+				+4.6
2,299,019	+				-0.2
2,299,063	-				+0.1
2,299,063	-				+0.9
2,299,074	+				+0.3
2,299,075	-				+2.3
2,299,075	-				-1.3
2,299,075	-				+0.7
2,299,103	+		Echvi_1958	0.10	+1.8
2,299,116	-		Echvi_1958	0.12	+0.9
2,299,131	+		Echvi_1958	0.14	+0.8
2,299,131	+		Echvi_1958	0.14	+1.6
2,299,131	+		Echvi_1958	0.14	-0.8
2,299,132	-		Echvi_1958	0.14	+2.4
2,299,132	-		Echvi_1958	0.14	+0.4
2,299,132	-		Echvi_1958	0.14	-1.3
2,299,164	+		Echvi_1958	0.18	+0.3
2,299,178	-		Echvi_1958	0.20	+0.4
2,299,178	-		Echvi_1958	0.20	-0.8
2,299,178	-		Echvi_1958	0.20	+1.3
2,299,187	+		Echvi_1958	0.21	+0.5
2,299,187	+		Echvi_1958	0.21	+0.3
2,299,187	+		Echvi_1958	0.21	+1.5
2,299,187	+		Echvi_1958	0.21	+1.8
2,299,188	-		Echvi_1958	0.21	-2.3
2,299,188	-		Echvi_1958	0.21	-1.8
2,299,216	-		Echvi_1958	0.24	+2.7
2,299,221	+		Echvi_1958	0.25	+1.8
2,299,221	+		Echvi_1958	0.25	-0.9
2,299,224	-		Echvi_1958	0.25	-2.9
2,299,224	-		Echvi_1958	0.25	+0.5
2,299,224	-		Echvi_1958	0.25	+0.7
2,299,234	+		Echvi_1958	0.27	-0.7
2,299,235	-		Echvi_1958	0.27	+1.0
2,299,249	+		Echvi_1958	0.29	-0.3
2,299,250	-		Echvi_1958	0.29	+0.8
2,299,250	-		Echvi_1958	0.29	+1.1
2,299,250	-		Echvi_1958	0.29	-0.3
2,299,251	+		Echvi_1958	0.29	-0.8
2,299,251	+		Echvi_1958	0.29	+1.0
2,299,251	+		Echvi_1958	0.29	+0.2
2,299,252	-		Echvi_1958	0.29	+3.0
2,299,252	-		Echvi_1958	0.29	-0.2
2,299,253	+		Echvi_1958	0.29	-0.5
2,299,253	+		Echvi_1958	0.29	+1.1
2,299,253	+		Echvi_1958	0.29	+0.9
2,299,253	+		Echvi_1958	0.29	-0.1
2,299,254	-		Echvi_1958	0.29	-1.4
2,299,254	-		Echvi_1958	0.29	+1.7
2,299,254	-		Echvi_1958	0.29	+1.7
2,299,254	-		Echvi_1958	0.29	-0.3
2,299,254	-		Echvi_1958	0.29	-1.1
2,299,288	-		Echvi_1958	0.34	-1.8
2,299,299	+		Echvi_1958	0.35	+0.9
2,299,303	-		Echvi_1958	0.35	-2.1
2,299,303	-		Echvi_1958	0.35	+0.7
2,299,324	+		Echvi_1958	0.38	+1.4
2,299,325	-		Echvi_1958	0.38	+1.8
2,299,325	-		Echvi_1958	0.38	-0.2
2,299,329	-		Echvi_1958	0.39	+0.2
2,299,333	-		Echvi_1958	0.39	-0.4
2,299,333	-		Echvi_1958	0.39	+0.0
2,299,333	-		Echvi_1958	0.39	-0.9
2,299,350	-		Echvi_1958	0.41	-2.3
2,299,374	-		Echvi_1958	0.45	-0.9
2,299,374	-		Echvi_1958	0.45	-1.1
2,299,410	+		Echvi_1958	0.49	+2.4
2,299,410	+		Echvi_1958	0.49	-0.5
2,299,410	+		Echvi_1958	0.49	+2.7
2,299,410	+		Echvi_1958	0.49	+1.5
2,299,411	-		Echvi_1958	0.49	+0.9
2,299,411	-		Echvi_1958	0.49	-0.9
2,299,413	+		Echvi_1958	0.49	+0.2
2,299,413	+		Echvi_1958	0.49	-0.8
2,299,413	+		Echvi_1958	0.49	+1.6
2,299,413	+		Echvi_1958	0.49	-1.7
2,299,413	+		Echvi_1958	0.49	+1.1
2,299,413	+		Echvi_1958	0.49	-1.2
2,299,414	-		Echvi_1958	0.50	-1.7
2,299,414	-		Echvi_1958	0.50	-4.3
2,299,414	-		Echvi_1958	0.50	-2.8
2,299,414	-		Echvi_1958	0.50	+0.7
2,299,414	-		Echvi_1958	0.50	+0.9
2,299,421	-		Echvi_1958	0.51	-2.9
2,299,447	+		Echvi_1958	0.54	-1.4
2,299,448	-		Echvi_1958	0.54	+4.4
2,299,487	+		Echvi_1958	0.59	+0.1
2,299,493	-		Echvi_1958	0.60	+1.3
2,299,503	+		Echvi_1958	0.61	-1.2
2,299,504	-		Echvi_1958	0.61	-1.6
2,299,504	-		Echvi_1958	0.61	-0.0
2,299,530	+		Echvi_1958	0.64	+0.5
2,299,531	-		Echvi_1958	0.65	-0.7
2,299,545	+		Echvi_1958	0.66	+2.2
2,299,546	-		Echvi_1958	0.66	+0.5
2,299,546	-		Echvi_1958	0.66	+0.9
2,299,546	-		Echvi_1958	0.66	+1.8
2,299,548	+		Echvi_1958	0.67	+0.1
2,299,548	+		Echvi_1958	0.67	-0.5
2,299,549	-		Echvi_1958	0.67	-2.5
2,299,549	-		Echvi_1958	0.67	+1.3
2,299,549	-		Echvi_1958	0.67	+0.6
2,299,563	+		Echvi_1958	0.69	+1.0
2,299,571	+		Echvi_1958	0.70	-2.2
2,299,571	+		Echvi_1958	0.70	+0.4
2,299,572	-		Echvi_1958	0.70	+1.8
2,299,583	+		Echvi_1958	0.71	+1.9
2,299,641	+		Echvi_1958	0.78	-1.5
2,299,643	+		Echvi_1958	0.79	-3.2
2,299,696	-		Echvi_1958	0.85	+0.9
2,299,696	-		Echvi_1958	0.85	+0.7
2,299,699	+		Echvi_1958	0.86	-2.1
2,299,699	+		Echvi_1958	0.86	+0.8
2,299,700	-		Echvi_1958	0.86	-2.4
2,299,700	-		Echvi_1958	0.86	-1.1
2,299,734	-				+1.0
2,299,762	-				-1.6
2,299,768	-				+0.8
2,299,774	-				-1.2
2,299,774	-				+2.2
2,299,774	-				+0.9
2,299,793	-				-1.8
2,299,805	-				-1.5
2,299,844	+				+0.2
2,299,844	+				-0.8
2,299,864	+				+1.4
2,299,864	+				+0.5
2,299,864	+				+0.7
2,299,864	+				-2.5
2,299,885	+				-0.1
2,299,909	-				+1.1
2,299,909	-				-0.9
2,299,964	-		Echvi_1959	0.12	-1.2
2,299,964	-		Echvi_1959	0.12	+2.3
2,299,982	+		Echvi_1959	0.16	+2.8
2,300,003	+		Echvi_1959	0.20	+2.0
2,300,043	-		Echvi_1959	0.28	+0.9
2,300,043	-		Echvi_1959	0.28	+0.5
2,300,043	-		Echvi_1959	0.28	+0.8
2,300,049	+		Echvi_1959	0.29	+0.8
2,300,049	+		Echvi_1959	0.29	+1.9
2,300,050	-		Echvi_1959	0.29	+1.7
2,300,052	-		Echvi_1959	0.29	+0.1
2,300,118	+		Echvi_1959	0.42	+1.1
2,300,118	+		Echvi_1959	0.42	-0.6
2,300,118	+		Echvi_1959	0.42	+1.1
2,300,122	+		Echvi_1959	0.43	+0.8
2,300,125	+		Echvi_1959	0.44	-3.6
2,300,125	+		Echvi_1959	0.44	-3.6
2,300,156	+		Echvi_1959	0.50	+1.0
2,300,158	+		Echvi_1959	0.50	-1.6
2,300,159	-		Echvi_1959	0.50	-0.8
2,300,175	+		Echvi_1959	0.54	+0.4
2,300,182	-		Echvi_1959	0.55	+2.5
2,300,182	-		Echvi_1959	0.55	-1.6
2,300,258	+		Echvi_1959	0.70	+0.7
2,300,259	-		Echvi_1959	0.70	-1.9
2,300,259	-		Echvi_1959	0.70	+0.5
2,300,299	+		Echvi_1959	0.78	+1.3
2,300,300	-		Echvi_1959	0.78	+0.3
2,300,300	-		Echvi_1959	0.78	+0.6
2,300,300	-		Echvi_1959	0.78	+1.8
2,300,300	-		Echvi_1959	0.78	-1.8
2,300,348	+		Echvi_1959	0.87	+2.0
2,300,349	-		Echvi_1959	0.88	-1.9
2,300,362	-				+0.5
2,300,397	-				-0.1
2,300,425	+				-2.2
2,300,447	+		Echvi_1960	0.11	+1.5
2,300,526	+		Echvi_1960	0.43	+0.8
2,300,542	+		Echvi_1960	0.50	-2.3
2,300,566	+		Echvi_1960	0.60	+0.3
2,300,576	-		Echvi_1960	0.64	-0.3
2,300,582	+				+0.1
2,300,608	-				-1.1
2,300,671	+				-0.1
2,300,684	+				+1.8
2,300,684	+				-2.1
2,300,685	-				-1.7
2,300,710	+				-2.1
2,300,710	+				+0.1
2,300,711	-				-0.3
2,300,719	+				-0.7
2,300,725	-				-2.3
2,300,725	-				+0.2
2,300,725	-				+0.3
2,300,747	-				+0.9
2,300,769	+				-2.5
2,300,769	+				+2.8
2,300,770	-				-1.1
2,300,803	+		Echvi_1961	0.11	-1.0