Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1940

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,282,955	+				-1.7
2,282,956	-				-2.5
2,282,956	-				-3.1
2,282,998	+				-1.2
2,282,999	-				+1.5
2,283,002	+				-0.9
2,283,003	-				-0.5
2,283,021	+				-1.2
2,283,129	+		Echvi_1939	0.15	-0.6
2,283,175	+		Echvi_1939	0.21	+2.5
2,283,202	-		Echvi_1939	0.24	+0.5
2,283,373	+		Echvi_1939	0.44	-1.6
2,283,421	+		Echvi_1939	0.50	+0.8
2,283,422	-		Echvi_1939	0.50	-0.1
2,283,650	+		Echvi_1939	0.77	+0.6
2,283,721	+		Echvi_1939	0.85	+0.4
2,283,721	+		Echvi_1939	0.85	-0.1
2,283,817	+				-2.0
2,283,826	+				-0.5
2,283,826	+				-0.6
2,283,827	-				-0.3
2,283,827	-				-0.8
2,283,830	+				+1.4
2,283,830	+				-1.4
2,284,108	+		Echvi_1940	0.20	-0.5
2,284,108	+		Echvi_1940	0.20	+0.4
2,284,156	+		Echvi_1940	0.24	-0.1
2,284,168	+		Echvi_1940	0.25	-1.1
2,284,195	-		Echvi_1940	0.27	-1.2
2,284,201	+		Echvi_1940	0.28	+0.3
2,284,389	+		Echvi_1940	0.43	+0.1
2,284,390	-		Echvi_1940	0.43	-1.6
2,284,519	+		Echvi_1940	0.53	+1.5
2,284,519	+		Echvi_1940	0.53	-1.0
2,284,520	-		Echvi_1940	0.53	-1.5
2,284,902	-		Echvi_1940	0.83	+1.5
2,284,902	-		Echvi_1940	0.83	-1.6
2,284,903	+		Echvi_1940	0.83	+0.2
2,284,903	+		Echvi_1940	0.83	-0.9
2,284,904	-		Echvi_1940	0.84	-1.5
2,284,930	-		Echvi_1940	0.86	+0.5
2,285,073	+				+1.4
2,285,131	+		Echvi_1941	0.13	+0.4
2,285,133	+		Echvi_1941	0.13	-0.3
2,285,133	+		Echvi_1941	0.13	+2.4
2,285,133	+		Echvi_1941	0.13	-0.8
2,285,134	-		Echvi_1941	0.14	-2.6
2,285,153	-		Echvi_1941	0.21	-0.6
2,285,264	+		Echvi_1941	0.65	-0.8
2,285,325	+		Echvi_1941	0.89	+1.6
2,285,336	+				-1.5
2,285,513	+		Echvi_1942	0.26	-0.8
2,285,516	+		Echvi_1942	0.27	+1.8
2,285,548	+		Echvi_1942	0.32	-2.1
2,285,548	+		Echvi_1942	0.32	-0.9
2,285,606	+		Echvi_1942	0.41	-1.4
2,285,663	+		Echvi_1942	0.51	+0.5
2,285,740	-		Echvi_1942	0.63	+1.8
2,285,742	+		Echvi_1942	0.63	-0.8
2,285,742	+		Echvi_1942	0.63	-1.5
2,285,743	-		Echvi_1942	0.64	-2.8
2,285,823	-		Echvi_1942	0.77	-0.5
2,285,823	-		Echvi_1942	0.77	-1.7
2,285,846	-		Echvi_1942	0.80	-2.7
2,285,967	+				-1.2
2,285,970	-				-0.1
2,285,970	-				-2.1
2,286,039	+				+0.6