Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1921

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,260,345	+		Echvi_1920	0.62	+1.5
2,260,387	-		Echvi_1920	0.64	+2.0
2,260,499	+		Echvi_1920	0.69	+0.6
2,260,500	-		Echvi_1920	0.69	-2.6
2,260,500	-		Echvi_1920	0.69	+2.5
2,260,510	+		Echvi_1920	0.70	+1.8
2,260,510	+		Echvi_1920	0.70	-1.9
2,260,511	-		Echvi_1920	0.70	-2.3
2,260,511	-		Echvi_1920	0.70	+0.7
2,260,594	-		Echvi_1920	0.74	-2.7
2,260,681	-		Echvi_1920	0.78	+1.1
2,260,700	+		Echvi_1920	0.79	-1.5
2,260,734	+		Echvi_1920	0.80	-1.6
2,261,267	+				+0.5
2,261,268	-				-0.8
2,261,268	-				-1.4
2,261,286	+				-2.0
2,261,286	+				+2.1
2,261,288	+				+1.3
2,261,289	-				+1.0
2,261,289	-				+1.5
2,261,301	-				+0.5
2,261,306	-				+1.5
2,261,350	+				+2.4
2,261,350	+				-1.0
2,261,350	+				-2.7
2,261,350	+				+2.5
2,261,351	-				+3.9
2,261,351	-				-0.7
2,261,351	-				+1.8
2,261,352	+				-1.3
2,261,352	+				-1.9
2,261,352	+				-1.9
2,261,353	-				+1.0
2,261,475	-		Echvi_1921	0.15	+0.0
2,261,483	-		Echvi_1921	0.15	+0.8
2,261,548	+		Echvi_1921	0.21	-1.0
2,261,548	+		Echvi_1921	0.21	+0.7
2,261,548	+		Echvi_1921	0.21	-3.5
2,261,549	-		Echvi_1921	0.21	+0.8
2,261,594	+		Echvi_1921	0.25	+0.4
2,261,615	+		Echvi_1921	0.27	+0.3
2,261,615	+		Echvi_1921	0.27	-0.1
2,261,616	-		Echvi_1921	0.27	-1.7
2,261,655	+		Echvi_1921	0.31	-0.5
2,262,028	+		Echvi_1921	0.64	-0.8
2,262,029	-		Echvi_1921	0.64	+0.3
2,262,151	+		Echvi_1921	0.75	+0.7
2,262,151	+		Echvi_1921	0.75	+4.8
2,262,151	+		Echvi_1921	0.75	-1.7
2,262,152	-		Echvi_1921	0.75	-0.6
2,262,166	+		Echvi_1921	0.77	+0.4
2,262,167	-		Echvi_1921	0.77	-1.1
2,262,204	+		Echvi_1921	0.80	-2.4
2,262,204	+		Echvi_1921	0.80	-0.8
2,262,206	+		Echvi_1921	0.80	-1.6
2,262,208	-		Echvi_1921	0.81	-3.2
2,262,237	+		Echvi_1921	0.83	+2.4
2,262,322	-				+1.5
2,262,330	+				+1.2
2,262,330	+				+0.6
2,262,331	-				+0.2
2,262,331	-				+0.5
2,262,514	+				-2.0
2,262,517	+				-0.6
2,262,517	+				-0.1
2,262,535	-				+0.9
2,262,579	+				-1.5
2,262,594	+				-1.4
2,262,594	+				-0.9
2,262,637	-				+0.6
2,262,726	+		Echvi_1922	0.16	-0.3
2,262,787	+		Echvi_1922	0.21	-0.5
2,262,790	+		Echvi_1922	0.21	+1.3
2,262,792	+		Echvi_1922	0.21	+2.3
2,262,874	+		Echvi_1922	0.28	-0.3
2,262,927	+		Echvi_1922	0.32	+0.9
2,262,961	+		Echvi_1922	0.35	-1.1
2,262,961	+		Echvi_1922	0.35	-1.6
2,262,962	-		Echvi_1922	0.35	+0.3
2,262,979	+		Echvi_1922	0.36	-0.5
2,262,979	+		Echvi_1922	0.36	-1.7
2,262,979	+		Echvi_1922	0.36	-1.3
2,262,979	+		Echvi_1922	0.36	-0.1
2,262,980	-		Echvi_1922	0.36	+1.9
2,262,980	-		Echvi_1922	0.36	-1.6
2,262,988	-		Echvi_1922	0.37	-0.7
2,263,009	+		Echvi_1922	0.38	+0.7
2,263,010	-		Echvi_1922	0.38	+0.9
2,263,010	-		Echvi_1922	0.38	+0.5
2,263,014	+		Echvi_1922	0.39	-2.1
2,263,028	+		Echvi_1922	0.40	-2.1
2,263,028	+		Echvi_1922	0.40	-0.0
2,263,034	-		Echvi_1922	0.40	+0.8
2,263,034	-		Echvi_1922	0.40	-1.5
2,263,035	+		Echvi_1922	0.40	-1.3
2,263,035	+		Echvi_1922	0.40	+1.4
2,263,035	+		Echvi_1922	0.40	-2.6
2,263,035	+		Echvi_1922	0.40	+1.7
2,263,036	-		Echvi_1922	0.40	+3.5
2,263,036	-		Echvi_1922	0.40	+0.6
2,263,041	+		Echvi_1922	0.41	+2.5
2,263,042	-		Echvi_1922	0.41	-0.1
2,263,179	+		Echvi_1922	0.52	+2.0
2,263,180	-		Echvi_1922	0.52	-0.2
2,263,182	+		Echvi_1922	0.52	+0.8
2,263,255	-		Echvi_1922	0.58	-0.6
2,263,296	+		Echvi_1922	0.61	-0.7
2,263,348	+		Echvi_1922	0.65	-1.6
2,263,349	-		Echvi_1922	0.65	+0.5
2,263,392	+		Echvi_1922	0.69	-0.5
2,263,392	+		Echvi_1922	0.69	-0.8
2,263,393	-		Echvi_1922	0.69	-1.4
2,263,401	-		Echvi_1922	0.70	+3.1
2,263,401	-		Echvi_1922	0.70	+3.1