Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1890

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,218,784	-				+0.7
2,218,878	+				+1.1
2,218,878	+				+0.1
2,218,878	+				-2.8
2,218,938	-				+3.4
2,218,938	-				+1.5
2,219,035	-				-4.3
2,219,085	-				-1.1
2,219,090	+		Echvi_1890	0.10	-1.9
2,219,133	+				+2.5
2,219,133	+		Echvi_1890	0.14	-1.1
2,219,134	-		Echvi_1890	0.14	+1.4
2,219,134	-		Echvi_1890	0.14	-0.8
2,219,134	-		Echvi_1890	0.14	+2.5
2,219,134	-		Echvi_1890	0.14	-1.4
2,219,145	+		Echvi_1890	0.15	-1.6
2,219,185	-		Echvi_1890	0.18	+0.8
2,219,250	+		Echvi_1890	0.23	+1.9
2,219,250	+		Echvi_1890	0.23	-3.3
2,219,251	-		Echvi_1890	0.24	-1.7
2,219,254	+		Echvi_1890	0.24	-1.8
2,219,254	+		Echvi_1890	0.24	-3.4
2,219,255	-		Echvi_1890	0.24	-3.7
2,219,255	-		Echvi_1890	0.24	+0.5
2,219,255	-		Echvi_1890	0.24	-2.0
2,219,278	+		Echvi_1890	0.26	+0.6
2,219,279	-		Echvi_1890	0.26	-0.8
2,219,397	-		Echvi_1890	0.36	-2.4
2,219,506	+		Echvi_1890	0.45	-1.8
2,219,507	-		Echvi_1890	0.45	-2.2
2,219,907	+		Echvi_1890	0.79	+1.5
2,219,907	+		Echvi_1890	0.79	-2.2
2,219,953	+		Echvi_1890	0.83	-0.5
2,219,954	-		Echvi_1890	0.83	-2.0
2,219,954	-		Echvi_1890	0.83	-1.2
2,220,050	+				-2.9
2,220,050	+				-1.4
2,220,050	+				-1.1
2,220,050	+				+0.9
2,220,050	+				-1.3
2,220,147	-				-1.7
2,220,152	+				-0.7
2,220,184	+				+0.5
2,220,199	-				-2.1
2,220,208	-				-1.8
2,220,216	-				-0.8
2,220,216	-				-0.8
2,220,223	+				+0.5
2,220,224	-				-1.3
2,220,271	+				-1.6
2,220,271	+				-2.1
2,220,271	+				-0.6
2,220,272	-				-0.8
2,220,352	-		Echvi_1891	0.12	-1.7
2,220,457	-		Echvi_1891	0.22	-0.1
2,220,712	+		Echvi_1891	0.45	-1.8
2,220,712	+		Echvi_1891	0.45	-0.8
2,220,712	+		Echvi_1891	0.45	-0.3
2,220,809	-		Echvi_1891	0.54	-0.9
2,220,809	-		Echvi_1891	0.54	+0.5
2,220,809	-		Echvi_1891	0.54	-0.1
2,220,809	-		Echvi_1891	0.54	-3.1
2,220,841	-		Echvi_1891	0.57	-1.9
2,220,841	-		Echvi_1891	0.57	-0.6
2,220,841	-		Echvi_1891	0.57	-1.4
2,220,871	+		Echvi_1891	0.60	-0.9
2,220,872	-		Echvi_1891	0.60	-0.5
2,220,872	-		Echvi_1891	0.60	-0.1
2,220,873	+		Echvi_1891	0.60	-2.5
2,220,873	+		Echvi_1891	0.60	+3.1
2,220,873	+		Echvi_1891	0.60	-1.3
2,220,874	-		Echvi_1891	0.60	+0.5
2,220,893	+		Echvi_1891	0.62	-0.3
2,220,910	-		Echvi_1891	0.64	-0.1
2,220,958	+		Echvi_1891	0.68	-3.2
2,220,959	-		Echvi_1891	0.68	-2.3
2,220,984	+		Echvi_1891	0.70	-2.6
2,220,985	-		Echvi_1891	0.70	-1.7
2,220,985	-		Echvi_1891	0.70	-2.0
2,221,126	-		Echvi_1891	0.83	-2.9