Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1862

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,181,358	+				-2.0
2,181,359	-				-1.4
2,181,412	+		Echvi_1861	0.14	+1.3
2,181,412	+		Echvi_1861	0.14	+1.9
2,181,412	+		Echvi_1861	0.14	+0.5
2,181,464	+		Echvi_1861	0.19	-0.3
2,181,465	-		Echvi_1861	0.19	+0.6
2,181,465	-		Echvi_1861	0.19	-1.3
2,181,467	-		Echvi_1861	0.20	+0.4
2,181,497	-		Echvi_1861	0.23	+3.4
2,181,541	-		Echvi_1861	0.27	+2.5
2,181,541	-		Echvi_1861	0.27	+2.2
2,181,601	+		Echvi_1861	0.33	-0.8
2,181,602	-		Echvi_1861	0.33	+1.9
2,181,623	+		Echvi_1861	0.35	+1.4
2,181,625	+		Echvi_1861	0.36	-0.7
2,181,635	+		Echvi_1861	0.37	+2.0
2,181,635	+		Echvi_1861	0.37	-2.9
2,181,635	+		Echvi_1861	0.37	-2.9
2,181,657	-		Echvi_1861	0.39	+0.1
2,181,730	+		Echvi_1861	0.46	-1.3
2,181,731	-		Echvi_1861	0.46	-0.3
2,181,784	+		Echvi_1861	0.52	-1.2
2,181,785	-		Echvi_1861	0.52	-0.8
2,181,788	+		Echvi_1861	0.52	+0.8
2,181,788	+		Echvi_1861	0.52	+1.5
2,181,788	+		Echvi_1861	0.52	-0.8
2,181,788	+		Echvi_1861	0.52	+1.3
2,181,789	-		Echvi_1861	0.52	+0.1
2,181,789	-		Echvi_1861	0.52	+2.2
2,181,789	-		Echvi_1861	0.52	+2.2
2,181,789	-		Echvi_1861	0.52	-1.2
2,181,789	-		Echvi_1861	0.52	+1.9
2,181,789	-		Echvi_1861	0.52	+5.1
2,181,789	-		Echvi_1861	0.52	-0.5
2,181,790	+		Echvi_1861	0.52	+1.8
2,181,790	+		Echvi_1861	0.52	+2.5
2,181,790	+		Echvi_1861	0.52	-0.5
2,181,790	+		Echvi_1861	0.52	+1.2
2,181,790	+		Echvi_1861	0.52	-0.7
2,181,790	+		Echvi_1861	0.52	-1.0
2,181,791	-		Echvi_1861	0.53	+1.2
2,181,791	-		Echvi_1861	0.53	-2.8
2,181,791	-		Echvi_1861	0.53	-2.3
2,181,791	-		Echvi_1861	0.53	+1.0
2,181,791	-		Echvi_1861	0.53	+1.6
2,181,791	-		Echvi_1861	0.53	-0.4
2,181,901	+		Echvi_1861	0.64	-0.7
2,181,902	-		Echvi_1861	0.64	-1.1
2,181,902	-		Echvi_1861	0.64	-1.3
2,181,902	-		Echvi_1861	0.64	+0.6
2,181,910	+		Echvi_1861	0.65	-2.0
2,181,911	-		Echvi_1861	0.65	-2.2
2,181,911	-		Echvi_1861	0.65	-0.3
2,181,951	-		Echvi_1861	0.69	+0.3
2,181,952	+		Echvi_1861	0.69	-1.5
2,181,953	-		Echvi_1861	0.69	+0.6
2,182,047	+		Echvi_1861	0.79	-2.1
2,182,048	-		Echvi_1861	0.79	-0.3
2,182,159	+				-2.1
2,182,160	-				+1.2
2,182,160	-				+2.3
2,182,161	+				-1.6
2,182,161	+				-1.9
2,182,161	+				-1.9
2,182,162	-				+2.7
2,182,162	-				-2.3
2,182,162	-				-0.5
2,182,162	-				+0.9
2,182,162	-				+1.8
2,182,162	-				-0.1
2,182,193	+				-0.6
2,182,194	-				+1.7
2,182,194	-				-0.9
2,182,226	+				-1.4
2,182,226	+				-1.0
2,182,226	+				+0.5
2,182,227	-				+0.5
2,182,227	-				-1.7
2,182,286	+				+2.9
2,182,361	+				+0.1
2,182,361	+				+0.5
2,182,361	+				-1.5
2,182,361	+				+1.4
2,182,361	+				+4.0
2,182,362	-				-0.1
2,182,362	-				-0.5
2,182,386	-		Echvi_1862	0.10	-1.6
2,182,390	+		Echvi_1862	0.11	-0.5
2,182,390	+		Echvi_1862	0.11	-0.6
2,182,391	-		Echvi_1862	0.11	-1.3
2,182,603	-		Echvi_1862	0.40	-0.9
2,182,604	+		Echvi_1862	0.40	-0.8
2,182,689	+		Echvi_1862	0.51	-1.2
2,182,690	-		Echvi_1862	0.51	-2.2
2,182,690	-		Echvi_1862	0.51	+2.3
2,182,694	-		Echvi_1862	0.52	-3.0
2,182,715	-		Echvi_1862	0.55	-0.3
2,182,734	+		Echvi_1862	0.57	+2.1
2,182,735	-		Echvi_1862	0.57	-1.9
2,182,768	+		Echvi_1862	0.62	+1.5
2,182,769	-		Echvi_1862	0.62	-2.8
2,182,769	-		Echvi_1862	0.62	-0.3
2,182,769	-		Echvi_1862	0.62	-2.3
2,182,788	+		Echvi_1862	0.65	+0.1
2,182,810	+		Echvi_1862	0.68	-1.2
2,182,810	+		Echvi_1862	0.68	+1.1
2,182,810	+		Echvi_1862	0.68	+1.1
2,182,810	+		Echvi_1862	0.68	-1.1
2,182,847	-		Echvi_1862	0.73	-2.4
2,182,847	-		Echvi_1862	0.73	-1.2
2,182,889	+		Echvi_1862	0.78	+0.4
2,182,893	-		Echvi_1862	0.79	-2.0
2,182,935	+		Echvi_1862	0.84	+2.1
2,182,953	+		Echvi_1862	0.87	-1.1
2,182,957	-		Echvi_1862	0.87	-0.2
2,182,968	+		Echvi_1862	0.89	-0.2
2,183,073	-				-0.8
2,183,073	-				-1.2
2,183,077	-				-1.4
2,183,103	+				+0.4
2,183,103	+				+1.5
2,183,104	-				+2.3
2,183,104	-				-1.6
2,183,181	+				-1.2
2,183,268	-				-0.3
2,183,380	-		Echvi_1863	0.14	-1.8
2,183,443	-		Echvi_1863	0.17	-0.1
2,183,510	+		Echvi_1863	0.20	+1.2
2,183,510	+		Echvi_1863	0.20	-1.9
2,183,535	+		Echvi_1863	0.21	-0.3
2,183,536	-		Echvi_1863	0.21	-1.1
2,183,538	+		Echvi_1863	0.21	-1.6
2,183,539	-		Echvi_1863	0.21	-0.8
2,183,539	-		Echvi_1863	0.21	+1.6
2,183,614	+		Echvi_1863	0.25	+0.4
2,183,614	+		Echvi_1863	0.25	-1.5
2,183,640	+		Echvi_1863	0.26	-0.5
2,183,646	-		Echvi_1863	0.26	-1.6
2,183,722	+		Echvi_1863	0.30	+4.3
2,183,723	-		Echvi_1863	0.30	+1.3
2,183,787	+		Echvi_1863	0.33	+2.1
2,183,945	+		Echvi_1863	0.40	+0.8
2,183,998	-		Echvi_1863	0.43	-0.3