Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1828

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,143,587	+		Echvi_1827	0.26	+1.1
2,143,596	+		Echvi_1827	0.27	+0.6
2,143,599	+		Echvi_1827	0.27	-0.1
2,143,600	-		Echvi_1827	0.27	+0.6
2,143,651	+		Echvi_1827	0.31	-0.9
2,143,653	+		Echvi_1827	0.31	-3.1
2,143,654	-		Echvi_1827	0.31	-0.6
2,143,654	-		Echvi_1827	0.31	-1.0
2,143,654	-		Echvi_1827	0.31	-1.2
2,143,654	-		Echvi_1827	0.31	-0.3
2,143,674	+		Echvi_1827	0.33	+0.9
2,143,675	-		Echvi_1827	0.33	+0.0
2,143,680	-		Echvi_1827	0.33	-3.5
2,143,680	-		Echvi_1827	0.33	-2.6
2,143,903	+		Echvi_1827	0.51	+2.1
2,143,903	+		Echvi_1827	0.51	-1.9
2,143,922	+		Echvi_1827	0.52	+2.3
2,143,923	-		Echvi_1827	0.52	-1.4
2,143,949	+		Echvi_1827	0.54	-2.8
2,144,003	+		Echvi_1827	0.59	+1.4
2,144,003	+				-0.1
2,144,003	+		Echvi_1827	0.59	+0.5
2,144,028	+		Echvi_1827	0.61	-0.8
2,144,195	-		Echvi_1827	0.74	-1.2
2,144,195	-		Echvi_1827	0.74	-0.6
2,144,195	-		Echvi_1827	0.74	+1.5
2,144,195	-		Echvi_1827	0.74	-1.2
2,144,243	+		Echvi_1827	0.78	+1.2
2,144,243	+		Echvi_1827	0.78	-0.2
2,144,276	+		Echvi_1827	0.80	-3.3
2,144,276	+		Echvi_1827	0.80	-0.3
2,144,276	+		Echvi_1827	0.80	-0.1
2,144,312	+		Echvi_1827	0.83	-0.6
2,144,313	-		Echvi_1827	0.83	-0.2
2,144,334	-		Echvi_1827	0.85	-1.9
2,144,380	+		Echvi_1827	0.88	-2.2
2,144,380	+		Echvi_1827	0.88	-1.4
2,144,385	-		Echvi_1827	0.89	-1.8
2,144,385	-		Echvi_1827	0.89	-1.9
2,144,390	-		Echvi_1827	0.89	-0.6
2,144,395	-		Echvi_1827	0.89	-1.6
2,144,417	+				+0.8
2,144,526	+				+1.0
2,144,527	-				-1.3
2,144,527	-				+2.5
2,144,608	+				-0.5
2,144,608	+				+0.1
2,144,635	-				-1.4
2,144,707	+		Echvi_1828	0.16	-2.8
2,144,708	-		Echvi_1828	0.16	+1.0
2,144,783	-		Echvi_1828	0.25	+1.9
2,144,845	-		Echvi_1828	0.32	-1.6
2,144,845	-		Echvi_1828	0.32	-2.3
2,144,845	-		Echvi_1828	0.32	+2.1
2,144,845	-		Echvi_1828	0.32	+2.2
2,144,950	+		Echvi_1828	0.44	+2.4
2,144,951	-		Echvi_1828	0.44	+0.2
2,144,951	-		Echvi_1828	0.44	+0.8
2,145,015	-		Echvi_1828	0.51	-0.0
2,145,044	+		Echvi_1828	0.55	-1.9
2,145,044	+		Echvi_1828	0.55	+0.6
2,145,045	-		Echvi_1828	0.55	-0.9
2,145,045	-		Echvi_1828	0.55	-2.0
2,145,046	+		Echvi_1828	0.55	+0.7
2,145,046	+		Echvi_1828	0.55	+0.5
2,145,046	+		Echvi_1828	0.55	+1.7
2,145,046	+		Echvi_1828	0.55	+3.3
2,145,046	+		Echvi_1828	0.55	+2.7
2,145,047	-		Echvi_1828	0.55	-1.1
2,145,047	-		Echvi_1828	0.55	+0.7
2,145,047	-		Echvi_1828	0.55	+2.2
2,145,047	-		Echvi_1828	0.55	+0.3
2,145,047	-		Echvi_1828	0.55	-1.9
2,145,124	+		Echvi_1828	0.64	+2.1
2,145,297	+		Echvi_1828	0.84	+0.6
2,145,330	+		Echvi_1828	0.87	+2.5
2,145,331	-		Echvi_1828	0.87	+3.5
2,145,375	+				+1.2
2,145,383	+				+1.8
2,145,418	+				-0.3
2,145,434	+				-1.9
2,145,434	+				+2.2
2,145,434	+				-2.1
2,145,434	+				-1.3
2,145,434	+				-1.2
2,145,434	+				-0.2
2,145,434	+				+1.0
2,145,434	+				-1.6
2,145,435	-				-1.9
2,145,435	-				-1.2
2,145,435	-				+1.3
2,145,435	-				+2.4
2,145,435	-				-2.3
2,145,435	-				+2.2
2,145,435	-				+0.7
2,145,440	+				-0.6
2,145,440	+				+1.7
2,145,441	-				-2.1
2,145,442	+				+1.1
2,145,443	-				+1.3
2,145,443	-				-1.9
2,145,533	+		Echvi_1829	0.21	+0.9
2,145,536	+		Echvi_1829	0.21	-0.8
2,145,590	+		Echvi_1829	0.32	+2.2
2,145,590	+		Echvi_1829	0.32	+0.0
2,145,591	-		Echvi_1829	0.33	+1.0
2,145,591	-		Echvi_1829	0.33	-0.2
2,145,612	+		Echvi_1829	0.37	+0.5
2,145,612	+		Echvi_1829	0.37	-2.0
2,145,612	+		Echvi_1829	0.37	+1.6
2,145,614	+		Echvi_1829	0.37	-1.1
2,145,672	-		Echvi_1829	0.49	-1.3
2,145,699	+		Echvi_1829	0.55	-0.6
2,145,699	+		Echvi_1829	0.55	+2.2
2,145,699	+		Echvi_1829	0.55	+0.8
2,145,786	-		Echvi_1829	0.73	+1.1
2,145,819	+		Echvi_1829	0.79	+0.7
2,145,819	+		Echvi_1829	0.79	+2.5
2,145,918	+				+0.8
2,145,918	+				-1.4
2,145,919	-				+0.2
2,145,919	-				+4.5
2,145,919	-				-1.6
2,145,951	+				-2.3
2,145,974	+				+2.7
2,145,974	+				+2.5
2,145,974	+				+0.7
2,145,975	-				-2.6
2,145,975	-				-2.1
2,145,975	-				+1.1
2,145,977	-				-1.3
2,146,046	+		Echvi_1830	0.13	+0.1
2,146,047	-		Echvi_1830	0.13	-1.7
2,146,047	-		Echvi_1830	0.13	-1.6
2,146,048	+		Echvi_1830	0.13	+1.4
2,146,048	+		Echvi_1830	0.13	+1.5
2,146,049	-		Echvi_1830	0.13	+0.7
2,146,049	-		Echvi_1830	0.13	-2.4
2,146,068	+		Echvi_1830	0.15	-2.5
2,146,068	+		Echvi_1830	0.15	-0.1
2,146,099	+		Echvi_1830	0.18	-1.2
2,146,100	-		Echvi_1830	0.18	+2.5
2,146,112	+		Echvi_1830	0.19	+2.3
2,146,113	-		Echvi_1830	0.19	-1.1
2,146,113	-		Echvi_1830	0.19	+0.5
2,146,136	+		Echvi_1830	0.22	+0.3
2,146,136	+		Echvi_1830	0.22	+1.1
2,146,137	-		Echvi_1830	0.22	-2.4
2,146,153	+		Echvi_1830	0.23	-0.8
2,146,154	-		Echvi_1830	0.24	+0.2
2,146,237	-		Echvi_1830	0.32	-0.8
2,146,248	-		Echvi_1830	0.33	-1.6
2,146,249	+		Echvi_1830	0.33	+2.0
2,146,250	-		Echvi_1830	0.33	-0.2
2,146,250	-		Echvi_1830	0.33	+0.9
2,146,263	+		Echvi_1830	0.35	-1.1
2,146,263	+		Echvi_1830	0.35	+0.9
2,146,263	+		Echvi_1830	0.35	+1.6
2,146,263	+		Echvi_1830	0.35	+3.0
2,146,271	+		Echvi_1830	0.35	-0.5
2,146,271	+		Echvi_1830	0.35	+1.0
2,146,272	-		Echvi_1830	0.35	-1.1
2,146,274	-		Echvi_1830	0.36	-0.3
2,146,274	-		Echvi_1830	0.36	-0.6
2,146,274	-		Echvi_1830	0.36	+0.5
2,146,303	-		Echvi_1830	0.39	-1.7
2,146,303	-		Echvi_1830	0.39	-0.5
2,146,303	-		Echvi_1830	0.39	-1.6
2,146,345	-		Echvi_1830	0.43	+0.5
2,146,345	-		Echvi_1830	0.43	-1.3
2,146,365	+		Echvi_1830	0.45	+2.0
2,146,397	+		Echvi_1830	0.48	-0.5
2,146,434	+		Echvi_1830	0.52	+0.8
2,146,435	-		Echvi_1830	0.52	-1.4