Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1822

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,138,874	-				+2.5
2,138,882	+				+3.1
2,138,883	-				-0.1
2,138,934	-				-3.7
2,138,934	-				-0.9
2,138,934	-				+0.8
2,138,934	-				-0.4
2,138,967	+				-1.7
2,138,968	-				+0.7
2,138,992	+				-0.3
2,138,992	+				+2.4
2,138,993	-				+0.8
2,138,993	-				+1.0
2,138,997	-				-3.5
2,139,008	+				-0.1
2,139,079	+				+0.5
2,139,080	-				+1.0
2,139,090	+				-1.4
2,139,102	-				-0.7
2,139,128	+				+0.5
2,139,181	+		Echvi_1821	0.12	+5.5
2,139,182	-		Echvi_1821	0.12	-0.5
2,139,182	-		Echvi_1821	0.12	+3.8
2,139,207	-		Echvi_1821	0.15	+1.5
2,139,361	+		Echvi_1821	0.34	+2.7
2,139,361	+		Echvi_1821	0.34	+2.5
2,139,361	+		Echvi_1821	0.34	+3.0
2,139,361	+		Echvi_1821	0.34	+2.9
2,139,361	+		Echvi_1821	0.34	+4.0
2,139,361	+		Echvi_1821	0.34	+3.0
2,139,361	+		Echvi_1821	0.34	+2.2
2,139,361	+		Echvi_1821	0.34	-0.8
2,139,361	+		Echvi_1821	0.34	+3.6
2,139,362	-		Echvi_1821	0.34	+3.5
2,139,362	-		Echvi_1821	0.34	+3.7
2,139,362	-		Echvi_1821	0.34	+3.6
2,139,362	-		Echvi_1821	0.34	+2.8
2,139,362	-		Echvi_1821	0.34	+2.9
2,139,362	-		Echvi_1821	0.34	+3.2
2,139,362	-		Echvi_1821	0.34	+2.9
2,139,362	-		Echvi_1821	0.34	+3.8
2,139,388	+		Echvi_1821	0.37	+3.5
2,139,388	+		Echvi_1821	0.37	+3.5
2,139,389	-		Echvi_1821	0.38	+1.5
2,139,389	-		Echvi_1821	0.38	+4.1
2,139,389	-		Echvi_1821	0.38	+3.6
2,139,390	+		Echvi_1821	0.38	+2.6
2,139,390	+		Echvi_1821	0.38	+3.8
2,139,391	-		Echvi_1821	0.38	+2.1
2,139,391	-		Echvi_1821	0.38	+3.7
2,139,391	-		Echvi_1821	0.38	+3.2
2,139,446	-		Echvi_1821	0.45	+3.2
2,139,446	-		Echvi_1821	0.45	+3.1
2,139,447	+		Echvi_1821	0.45	+2.3
2,139,447	+		Echvi_1821	0.45	-1.1
2,139,448	-		Echvi_1821	0.45	+3.6
2,139,448	-		Echvi_1821	0.45	+1.7
2,139,448	-		Echvi_1821	0.45	+1.9
2,139,471	-		Echvi_1821	0.48	+3.0
2,139,473	+		Echvi_1821	0.48	-0.3
2,139,473	+		Echvi_1821	0.48	+2.8
2,139,473	+		Echvi_1821	0.48	+2.3
2,139,473	+		Echvi_1821	0.48	+1.0
2,139,473	+		Echvi_1821	0.48	+2.4
2,139,474	-		Echvi_1821	0.48	+2.9
2,139,474	-		Echvi_1821	0.48	-1.3
2,139,511	-		Echvi_1821	0.53	+1.9
2,139,511	-		Echvi_1821	0.53	-1.3
2,139,542	+		Echvi_1821	0.57	+3.9
2,139,593	+		Echvi_1821	0.63	+2.6
2,139,594	-		Echvi_1821	0.63	+2.6
2,139,688	-		Echvi_1821	0.75	+3.2
2,139,688	-		Echvi_1821	0.75	-1.5
2,139,709	+		Echvi_1821	0.78	+1.9
2,139,764	-		Echvi_1821	0.85	+3.5
2,139,813	-				+3.3
2,139,836	+				+1.9
2,139,851	+				-1.2
2,139,969	-		Echvi_1822	0.19	+0.9
2,139,974	+		Echvi_1822	0.19	+0.1
2,139,975	-		Echvi_1822	0.19	+0.5
2,140,041	-		Echvi_1822	0.28	+0.9
2,140,071	+		Echvi_1822	0.33	-0.8
2,140,489	-				+0.5
2,140,542	-				+1.5
2,140,586	+				+0.9
2,140,587	-				-1.2
2,140,593	-				-1.3
2,141,293	-				-0.1
2,141,321	-				-0.5
2,141,337	+				-1.3
2,141,340	+				-0.6
2,141,366	+				-1.1
2,141,367	-				+0.9
2,141,367	-				-2.0
2,141,395	+		Echvi_1824	0.10	-1.9
2,141,395	+		Echvi_1824	0.10	+1.8
2,141,395	+		Echvi_1824	0.10	-2.7
2,141,395	+		Echvi_1824	0.10	+0.5
2,141,396	-		Echvi_1824	0.11	+1.4
2,141,396	-		Echvi_1824	0.11	-0.5
2,141,398	-		Echvi_1824	0.11	+1.0
2,141,407	-		Echvi_1824	0.13	+1.2
2,141,407	-		Echvi_1824	0.13	-1.3
2,141,407	-		Echvi_1824	0.13	+0.6
2,141,463	-		Echvi_1824	0.26	+0.3
2,141,465	+		Echvi_1824	0.26	-0.8
2,141,512	+		Echvi_1824	0.37	+0.5
2,141,512	+		Echvi_1824	0.37	-1.8
2,141,513	-		Echvi_1824	0.37	+0.9
2,141,513	-		Echvi_1824	0.37	+0.9
2,141,515	-		Echvi_1824	0.38	-3.1
2,141,515	-		Echvi_1824	0.38	-2.9