Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1810
Experiment: m.b. D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. D-Cycloserine 0.064 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,128,785 | - | +0.5 | |||
2,128,797 | + | +1.0 | |||
2,128,798 | - | +0.7 | |||
2,128,818 | + | -1.0 | |||
2,128,909 | + | Echvi_1809 | 0.17 | -1.3 | |
2,128,910 | - | Echvi_1809 | 0.17 | -1.9 | |
2,129,238 | - | Echvi_1809 | 0.53 | -2.5 | |
2,129,391 | + | Echvi_1809 | 0.70 | -0.0 | |
2,129,404 | + | Echvi_1809 | 0.71 | -1.2 | |
2,129,760 | + | +2.3 | |||
2,129,761 | - | -0.8 | |||
2,129,761 | - | -2.0 | |||
2,130,199 | - | +0.1 | |||
2,130,205 | + | -2.3 | |||
2,130,206 | - | -0.9 | |||
2,130,206 | - | -0.3 | |||
2,130,206 | - | -2.8 | |||
2,130,218 | + | -1.7 |
Or see this region's nucleotide sequence