Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1787

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,100,905	-		Echvi_1784	0.87	+2.2
2,100,990	+				-0.9
2,100,990	+				-0.1
2,100,990	+				-1.9
2,101,042	-				+2.7
2,101,109	-				-0.6
2,101,109	-				-3.5
2,101,110	+				-0.1
2,101,110	+				-1.9
2,101,110	+				-0.8
2,101,110	+				-1.1
2,101,110	+				+0.9
2,101,111	-				+0.2
2,101,111	-				-1.8
2,101,111	-				-0.2
2,101,111	-				+0.1
2,101,111	-				+2.3
2,101,111	-				-3.7
2,101,113	-				+1.5
2,101,113	-				+1.2
2,101,113	-				-1.2
2,101,113	-				-0.1
2,101,113	-				+3.1
2,101,113	-				-0.1
2,101,119	+				-2.0
2,101,119	+				+1.4
2,101,119	+				-0.6
2,101,128	+				+0.4
2,101,141	+				-0.2
2,101,142	-				-1.8
2,101,156	+				+0.4
2,101,925	+				+2.3
2,101,925	+				-2.2
2,101,925	+				+1.7
2,101,928	+				+1.5
2,101,928	+				-0.0
2,101,946	+				-0.4
2,101,946	+				+1.7
2,101,946	+				-2.2
2,101,946	+				+0.7
2,101,946	+				+0.9
2,101,946	+				+2.9
2,101,992	+				+0.0
2,102,022	+				+0.7
2,102,048	+		Echvi_1787	0.10	-3.4
2,102,049	-		Echvi_1787	0.10	-1.4
2,102,056	+		Echvi_1787	0.11	+0.8
2,102,059	+		Echvi_1787	0.11	+1.2
2,102,059	+		Echvi_1787	0.11	-0.4
2,102,059	+		Echvi_1787	0.11	-1.7
2,102,090	+		Echvi_1787	0.13	+1.9
2,102,091	-		Echvi_1787	0.13	+0.5
2,102,131	+		Echvi_1787	0.15	+0.3
2,102,131	+		Echvi_1787	0.15	+4.3
2,102,132	-		Echvi_1787	0.15	-0.6
2,102,133	+		Echvi_1787	0.15	-1.9
2,102,133	+		Echvi_1787	0.15	+1.0
2,102,133	+		Echvi_1787	0.15	-0.3
2,102,140	+		Echvi_1787	0.16	+0.7
2,102,140	+		Echvi_1787	0.16	+0.9
2,102,140	+		Echvi_1787	0.16	-1.1
2,102,142	+		Echvi_1787	0.16	-1.9
2,102,240	+		Echvi_1787	0.22	+1.7
2,102,240	+		Echvi_1787	0.22	-0.8
2,102,240	+		Echvi_1787	0.22	-0.1
2,102,241	-				+4.9
2,102,243	+		Echvi_1787	0.22	-0.5
2,102,243	+		Echvi_1787	0.22	+0.5
2,102,244	-		Echvi_1787	0.22	-0.8
2,102,283	+		Echvi_1787	0.24	-1.4
2,102,309	+		Echvi_1787	0.26	-1.6
2,102,427	+		Echvi_1787	0.33	+1.2
2,102,427	+		Echvi_1787	0.33	+1.7
2,102,430	+		Echvi_1787	0.33	-0.8
2,102,430	+		Echvi_1787	0.33	+0.1
2,102,430	+		Echvi_1787	0.33	-2.1
2,102,467	+		Echvi_1787	0.35	+1.2
2,102,490	-		Echvi_1787	0.36	-0.1
2,102,537	+		Echvi_1787	0.39	+2.9
2,102,613	+		Echvi_1787	0.44	+1.3
2,102,661	+		Echvi_1787	0.46	+2.3
2,102,685	+		Echvi_1787	0.48	+2.0
2,102,699	+		Echvi_1787	0.49	-1.6
2,102,710	+		Echvi_1787	0.49	+2.3
2,102,712	+		Echvi_1787	0.49	+0.5
2,102,712	+		Echvi_1787	0.49	-0.4
2,102,712	+		Echvi_1787	0.49	+1.8
2,102,712	+		Echvi_1787	0.49	-0.9
2,102,712	+		Echvi_1787	0.49	+2.5
2,102,712	+		Echvi_1787	0.49	+0.9
2,102,815	+		Echvi_1787	0.55	+0.2
2,102,887	+		Echvi_1787	0.60	+0.8
2,102,920	+		Echvi_1787	0.62	+2.5
2,102,920	+		Echvi_1787	0.62	-1.1
2,102,923	+		Echvi_1787	0.62	-2.2
2,102,923	+		Echvi_1787	0.62	-0.7
2,102,923	+		Echvi_1787	0.62	+0.2
2,102,925	+		Echvi_1787	0.62	-1.7
2,102,925	+		Echvi_1787	0.62	+1.2
2,102,943	+		Echvi_1787	0.63	+0.7
2,102,943	+		Echvi_1787	0.63	-1.6
2,102,990	+		Echvi_1787	0.66	+1.7
2,102,990	+		Echvi_1787	0.66	-0.1
2,103,094	+		Echvi_1787	0.72	-2.5
2,103,094	+		Echvi_1787	0.72	+1.7
2,103,095	-		Echvi_1787	0.72	-1.0
2,103,105	+		Echvi_1787	0.73	+1.7
2,103,109	+		Echvi_1787	0.73	+2.6
2,103,109	+		Echvi_1787	0.73	+0.2
2,103,250	+		Echvi_1787	0.81	+1.1
2,103,256	+		Echvi_1787	0.81	-0.3
2,103,256	+		Echvi_1787	0.81	+3.0
2,103,256	+		Echvi_1787	0.81	+0.1
2,103,257	-		Echvi_1787	0.82	-0.3
2,103,257	-		Echvi_1787	0.82	+0.5
2,103,298	+		Echvi_1787	0.84	-0.9
2,103,327	+		Echvi_1787	0.86	+0.2
2,103,328	-		Echvi_1787	0.86	-0.3
2,103,331	-		Echvi_1787	0.86	+0.9
2,103,434	+				+1.5
2,103,461	+				-0.8
2,103,464	+				+1.2
2,103,464	+				+0.8
2,103,486	+				+0.6
2,103,532	+				-0.4
2,103,532	+				-0.2
2,103,532	+				-0.5
2,103,569	-				+2.5
2,103,671	+				+0.3
2,103,671	+				-0.6
2,103,671	+				+1.3
2,103,671	+				+1.7
2,103,677	+				-0.5
2,103,687	+				-0.6
2,104,379	+				-0.9
2,104,415	+				+1.1
2,104,415	+				+3.1
2,104,423	+				+2.9
2,104,433	-				+0.5
2,104,446	+				+0.9
2,104,446	+		Echvi_1789	0.12	+3.0
2,104,446	+		Echvi_1789	0.12	+1.9
2,104,446	+		Echvi_1789	0.12	+2.8
2,104,541	-		Echvi_1789	0.30	+4.1