Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1691

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,980,694	+		Echvi_1690	0.27	-0.3
1,980,694	+		Echvi_1690	0.27	+1.5
1,980,715	+		Echvi_1690	0.29	+0.1
1,980,715	+		Echvi_1690	0.29	-2.6
1,980,716	-		Echvi_1690	0.29	-0.0
1,980,746	+		Echvi_1690	0.32	-1.2
1,980,878	-		Echvi_1690	0.45	-1.9
1,980,982	+		Echvi_1690	0.55	-1.2
1,980,983	-		Echvi_1690	0.55	-0.8
1,980,983	-		Echvi_1690	0.55	+0.8
1,981,033	+		Echvi_1690	0.60	-1.3
1,981,068	+		Echvi_1690	0.63	-0.9
1,981,219	+		Echvi_1690	0.78	+0.2
1,981,244	+		Echvi_1690	0.80	-0.5
1,981,270	-		Echvi_1690	0.83	-1.3
1,981,379	+				-0.4
1,981,382	+				-1.0
1,981,383	-				-0.8
1,981,383	-				+1.8
1,981,401	-				+6.5
1,981,479	+				+2.0
1,981,480	-				+1.2
1,981,480	-				-1.8
1,981,480	-				+0.9
1,981,511	-				+0.3
1,981,516	-				-2.1
1,981,516	-				-2.2
1,981,566	+				-0.6
1,981,596	+				+2.0
1,981,597	-				-0.9
1,981,597	-				+0.9
1,981,610	+				+1.1
1,981,611	-				-1.4
1,981,675	+				+0.7
1,981,687	-				-1.7
1,981,695	-				+0.6
1,981,697	+				+3.1
1,981,778	-				+1.6
1,981,801	-		Echvi_1691	0.11	+1.4
1,981,803	+		Echvi_1691	0.11	+0.2
1,981,804	-		Echvi_1691	0.11	+1.3
1,981,813	-		Echvi_1691	0.12	+0.5
1,981,813	-		Echvi_1691	0.12	+0.2
1,981,935	-		Echvi_1691	0.24	+0.2
1,981,935	-		Echvi_1691	0.24	+0.7
1,982,065	+		Echvi_1691	0.36	+1.6
1,982,065	+		Echvi_1691	0.36	-0.3
1,982,065	+		Echvi_1691	0.36	+0.3
1,982,114	+		Echvi_1691	0.41	+1.1
1,982,114	+		Echvi_1691	0.41	-2.7
1,982,115	-		Echvi_1691	0.41	+1.4
1,982,115	-		Echvi_1691	0.41	-2.1
1,982,123	+		Echvi_1691	0.42	-1.3
1,982,124	-		Echvi_1691	0.42	-0.8
1,982,124	-		Echvi_1691	0.42	+0.6
1,982,124	-		Echvi_1691	0.42	-1.4
1,982,145	+		Echvi_1691	0.44	-2.9
1,982,175	+		Echvi_1691	0.47	+0.8
1,982,258	+		Echvi_1691	0.55	-2.3
1,982,260	+		Echvi_1691	0.55	+1.6
1,982,261	-		Echvi_1691	0.55	-2.7
1,982,261	-		Echvi_1691	0.55	+0.6
1,982,316	+		Echvi_1691	0.61	+0.2
1,982,316	+		Echvi_1691	0.61	+1.7
1,982,329	+				+0.2
1,982,330	-		Echvi_1691	0.62	-2.5
1,982,352	+		Echvi_1691	0.64	-0.8
1,982,402	-		Echvi_1691	0.69	+1.4
1,982,493	+		Echvi_1691	0.78	+2.0
1,982,493	+		Echvi_1691	0.78	-2.3
1,982,494	-		Echvi_1691	0.78	+2.2
1,982,570	+		Echvi_1691	0.85	+3.0
1,982,615	-		Echvi_1691	0.89	+1.6
1,982,648	-				+0.2
1,982,648	-				-0.0
1,982,648	-				+0.9
1,982,712	+				-1.4
1,982,797	-				+0.6
1,982,816	-				-0.6
1,982,841	-				-1.5
1,982,862	+				-2.8
1,982,863	-				-0.9
1,982,867	-				-1.4
1,982,867	-				-0.0
1,982,891	+				+1.9
1,982,913	-				+1.7
1,982,936	-				-2.6
1,982,936	-				-0.3
1,982,957	+				+3.7
1,982,957	+				-2.2
1,982,957	+				-0.0
1,982,957	+				-0.4
1,982,958	-				-1.1
1,982,958	-				+0.2
1,982,958	-				+2.1
1,982,961	-				+1.8
1,983,205	+		Echvi_1692	0.22	-1.0
1,983,205	+		Echvi_1692	0.22	-2.6
1,983,232	-		Echvi_1692	0.24	-1.6
1,983,244	-		Echvi_1692	0.25	-1.3
1,983,244	-		Echvi_1692	0.25	+0.6
1,983,245	+		Echvi_1692	0.25	-0.3
1,983,398	-		Echvi_1692	0.37	+4.8
1,983,472	+		Echvi_1692	0.43	+1.2
1,983,587	+		Echvi_1692	0.52	+0.5
1,983,587	+		Echvi_1692	0.52	-0.4
1,983,587	+		Echvi_1692	0.52	+0.0
1,983,587	+		Echvi_1692	0.52	+1.3
1,983,587	+		Echvi_1692	0.52	+1.8
1,983,587	+		Echvi_1692	0.52	-0.1
1,983,588	-		Echvi_1692	0.52	-0.8
1,983,588	-		Echvi_1692	0.52	+1.3
1,983,596	-		Echvi_1692	0.53	+2.1
1,983,659	-		Echvi_1692	0.58	-1.5
1,983,702	+		Echvi_1692	0.62	+1.6