Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1670

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,947,464	-		Echvi_1669	0.83	+0.2
1,947,539	-		Echvi_1669	0.86	-0.8
1,947,667	+				+0.5
1,947,667	+				-0.1
1,947,667	+				-1.1
1,947,670	+				+0.2
1,947,670	+				-0.0
1,947,670	+				-0.3
1,947,671	-				-0.9
1,947,772	+				-1.5
1,947,897	+				-1.6
1,947,910	+				-0.2
1,947,986	+				+1.2
1,948,038	+				+0.1
1,948,038	+				-1.4
1,948,039	-				+1.3
1,948,092	+				+0.2
1,948,099	+				+1.5
1,948,099	+				-0.9
1,948,099	+				+0.1
1,948,100	-				+0.3
1,948,106	+				-0.5
1,948,137	-				-1.8
1,948,137	-				+1.0
1,948,137	-				+0.5
1,948,195	+				+1.6
1,948,290	+				-1.4
1,948,324	-				-1.3
1,948,324	-				+0.4
1,948,324	-				-1.1
1,948,362	+				-0.5
1,948,363	-				-2.9
1,948,378	+				-2.3
1,948,382	+				+0.4
1,948,439	+				-0.8
1,948,439	+				+0.9
1,948,440	-				+3.1
1,948,440	-				-1.9
1,948,506	+		Echvi_1670	0.20	+0.2
1,948,506	+		Echvi_1670	0.20	-2.4
1,948,506	+		Echvi_1670	0.20	-3.3
1,948,519	+		Echvi_1670	0.22	+0.8
1,948,519	+		Echvi_1670	0.22	+1.2
1,948,519	+		Echvi_1670	0.22	-0.4
1,948,519	+		Echvi_1670	0.22	-0.3
1,948,519	+		Echvi_1670	0.22	-1.2
1,948,519	+		Echvi_1670	0.22	+1.5
1,948,520	-		Echvi_1670	0.22	-0.3
1,948,520	-		Echvi_1670	0.22	-1.8
1,948,520	-		Echvi_1670	0.22	-1.9
1,948,520	-		Echvi_1670	0.22	+2.5
1,948,524	+		Echvi_1670	0.23	-0.3
1,948,525	-		Echvi_1670	0.23	+1.5
1,948,551	+		Echvi_1670	0.27	-1.2
1,948,551	+		Echvi_1670	0.27	+2.3
1,948,556	+		Echvi_1670	0.28	-2.3
1,948,583	+		Echvi_1670	0.32	+0.6
1,948,583	+		Echvi_1670	0.32	+2.3
1,948,595	+		Echvi_1670	0.34	+1.4
1,948,655	+		Echvi_1670	0.43	-0.7
1,948,691	+		Echvi_1670	0.49	+1.6
1,948,691	+		Echvi_1670	0.49	+2.8
1,948,702	-		Echvi_1670	0.51	-2.6
1,948,722	+		Echvi_1670	0.54	+0.7
1,948,723	-		Echvi_1670	0.54	-2.2
1,948,723	-		Echvi_1670	0.54	-2.8
1,948,777	+		Echvi_1670	0.62	+1.5
1,948,777	+		Echvi_1670	0.62	+1.1
1,948,777	+		Echvi_1670	0.62	-2.5
1,948,777	+		Echvi_1670	0.62	-0.8
1,948,777	+		Echvi_1670	0.62	+4.0
1,948,777	+		Echvi_1670	0.62	+0.1
1,948,778	-		Echvi_1670	0.62	+0.8
1,948,778	-		Echvi_1670	0.62	+1.8
1,948,778	-		Echvi_1670	0.62	-2.6
1,948,778	-		Echvi_1670	0.62	-0.2
1,948,795	-		Echvi_1670	0.65	+1.5
1,948,798	-		Echvi_1670	0.66	+2.6
1,948,830	-		Echvi_1670	0.71	-2.2
1,948,839	+		Echvi_1670	0.72	-0.3
1,948,839	+		Echvi_1670	0.72	+1.2
1,948,840	-		Echvi_1670	0.72	-2.1
1,948,840	-		Echvi_1670	0.72	+3.3
1,948,877	+		Echvi_1670	0.78	+0.5
1,948,878	-		Echvi_1670	0.78	+0.2
1,948,878	-		Echvi_1670	0.78	-1.7
1,948,879	+		Echvi_1670	0.78	+1.8
1,948,879	+		Echvi_1670	0.78	-0.8
1,948,880	-		Echvi_1670	0.78	-0.9
1,948,880	-		Echvi_1670	0.78	-2.0
1,948,880	-		Echvi_1670	0.78	-0.9
1,948,887	-		Echvi_1670	0.79	-2.1
1,948,986	-				+1.4
1,949,076	+				+2.4
1,949,076	+				+1.7
1,949,092	+				-0.5
1,949,092	+				-3.2
1,949,093	-				-1.2
1,949,190	+		Echvi_1671	0.20	-0.8
1,949,247	+		Echvi_1671	0.26	-0.5
1,949,313	+		Echvi_1671	0.32	+1.9
1,949,313	+		Echvi_1671	0.32	-0.3
1,949,313	+		Echvi_1671	0.32	+0.5
1,949,395	+		Echvi_1671	0.41	+0.9
1,949,474	+		Echvi_1671	0.49	-2.2
1,949,560	+		Echvi_1671	0.59	+0.2
1,949,560	+		Echvi_1671	0.59	+0.9
1,949,617	-		Echvi_1671	0.65	+0.6
1,949,696	-		Echvi_1671	0.73	+0.5
1,949,745	-		Echvi_1671	0.78	+1.1
1,949,821	-		Echvi_1671	0.86	-1.4
1,949,851	-		Echvi_1671	0.89	-0.3
1,949,932	-				+1.7
1,949,932	-				+0.4
1,950,006	+				-2.2
1,950,012	-				-3.4