Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1653

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,917,325	-		Echvi_1652	0.45	+1.4
1,917,351	-		Echvi_1652	0.46	+1.3
1,917,352	+		Echvi_1652	0.46	+0.9
1,917,361	+		Echvi_1652	0.47	-1.6
1,917,362	-		Echvi_1652	0.47	-1.7
1,917,440	+		Echvi_1652	0.51	-1.3
1,917,441	-		Echvi_1652	0.51	+5.0
1,917,441	-		Echvi_1652	0.51	-1.2
1,917,450	+		Echvi_1652	0.52	-1.8
1,917,471	-		Echvi_1652	0.53	-2.1
1,917,561	-		Echvi_1652	0.58	+0.5
1,917,563	+		Echvi_1652	0.59	-1.7
1,917,563	+		Echvi_1652	0.59	-1.9
1,917,564	-		Echvi_1652	0.59	-2.6
1,917,564	-		Echvi_1652	0.59	-0.8
1,917,688	+		Echvi_1652	0.66	+0.9
1,917,689	-		Echvi_1652	0.66	-1.8
1,917,690	+		Echvi_1652	0.66	+1.5
1,917,691	-		Echvi_1652	0.66	+1.8
1,917,691	-		Echvi_1652	0.66	-0.9
1,917,736	+		Echvi_1652	0.69	-0.6
1,917,736	+		Echvi_1652	0.69	+0.5
1,917,784	+		Echvi_1652	0.71	+0.2
1,917,785	-		Echvi_1652	0.72	+3.5
1,917,787	+		Echvi_1652	0.72	-1.3
1,917,787	+		Echvi_1652	0.72	-0.1
1,917,788	-		Echvi_1652	0.72	+2.5
1,917,788	-		Echvi_1652	0.72	-3.7
1,917,788	-		Echvi_1652	0.72	-1.7
1,917,788	-		Echvi_1652	0.72	+0.8
1,917,788	-		Echvi_1652	0.72	-1.2
1,917,858	+		Echvi_1652	0.76	-1.9
1,917,859	-		Echvi_1652	0.76	-0.6
1,917,877	+		Echvi_1652	0.77	+0.5
1,917,878	-		Echvi_1652	0.77	-0.1
1,917,884	+		Echvi_1652	0.77	-0.6
1,917,906	+		Echvi_1652	0.79	-0.5
1,917,906	+		Echvi_1652	0.79	-0.5
1,917,906	+		Echvi_1652	0.79	+0.9
1,917,906	+		Echvi_1652	0.79	-0.5
1,917,954	+		Echvi_1652	0.81	-2.6
1,918,043	-		Echvi_1652	0.87	+1.9
1,918,122	+				+0.2
1,918,123	-				-2.3
1,918,161	+				+1.1
1,918,161	+				+2.5
1,918,161	+				-2.0
1,918,161	+				-1.1
1,918,161	+				-2.6
1,918,195	-				+0.5
1,918,219	+				-2.2
1,918,253	-				-0.7
1,918,291	+				-0.5
1,918,292	-				-2.2
1,918,292	-				+2.7
1,918,321	-				+0.4
1,918,326	+				-1.5
1,918,343	+				-1.3
1,918,388	+				+1.1
1,918,512	+		Echvi_1653	0.15	-1.9
1,918,513	-		Echvi_1653	0.15	-1.6
1,918,574	+		Echvi_1653	0.19	+1.1
1,918,575	-		Echvi_1653	0.20	+1.3
1,918,586	-		Echvi_1653	0.20	-0.6
1,918,647	-		Echvi_1653	0.25	-3.3
1,918,652	+		Echvi_1653	0.25	+3.7
1,918,652	+		Echvi_1653	0.25	+0.2
1,918,652	+		Echvi_1653	0.25	-0.4
1,918,653	-		Echvi_1653	0.25	-1.2
1,918,653	-		Echvi_1653	0.25	-0.6
1,918,653	-		Echvi_1653	0.25	+3.5
1,918,687	+		Echvi_1653	0.28	-1.4
1,918,687	+		Echvi_1653	0.28	-3.1
1,918,688	-		Echvi_1653	0.28	+0.9
1,918,737	+		Echvi_1653	0.31	-1.2
1,918,737	+		Echvi_1653	0.31	-0.9
1,918,771	-		Echvi_1653	0.34	-2.4
1,918,771	-		Echvi_1653	0.34	+0.5
1,918,771	-		Echvi_1653	0.34	-2.4
1,918,772	+		Echvi_1653	0.34	+1.5
1,918,807	+		Echvi_1653	0.37	-1.6
1,918,857	-		Echvi_1653	0.40	-0.9
1,918,943	+		Echvi_1653	0.47	-0.6
1,918,943	+		Echvi_1653	0.47	-1.2
1,918,947	+		Echvi_1653	0.47	-1.4
1,918,947	+		Echvi_1653	0.47	-2.5
1,918,964	-		Echvi_1653	0.48	+0.2
1,918,978	-		Echvi_1653	0.49	-2.5
1,919,007	+		Echvi_1653	0.51	-0.1
1,919,013	-		Echvi_1653	0.52	-0.4
1,919,084	+		Echvi_1653	0.57	-2.0
1,919,094	+		Echvi_1653	0.58	-0.6
1,919,095	-		Echvi_1653	0.58	-0.3
1,919,095	-		Echvi_1653	0.58	+0.6
1,919,098	-		Echvi_1653	0.58	+2.5
1,919,214	+		Echvi_1653	0.66	-0.9
1,919,214	+		Echvi_1653	0.66	-0.2
1,919,215	-		Echvi_1653	0.66	+1.2
1,919,221	-		Echvi_1653	0.67	-0.6
1,919,222	+		Echvi_1653	0.67	-1.4
1,919,223	-		Echvi_1653	0.67	-1.9
1,919,266	-		Echvi_1653	0.70	+0.2
1,919,266	-		Echvi_1653	0.70	-0.5
1,919,371	-		Echvi_1653	0.78	-0.4
1,919,377	+		Echvi_1653	0.78	+1.6
1,919,378	-		Echvi_1653	0.78	-4.2
1,919,378	-		Echvi_1653	0.78	+0.5
1,919,378	-		Echvi_1653	0.78	-0.2
1,919,405	+		Echvi_1653	0.80	+0.7
1,919,405	+		Echvi_1653	0.80	+0.9
1,919,406	-		Echvi_1653	0.80	+0.5
1,919,406	-		Echvi_1653	0.80	+0.8
1,919,412	+		Echvi_1653	0.81	+0.8
1,919,412	+		Echvi_1653	0.81	+0.5
1,919,412	+		Echvi_1653	0.81	-1.0
1,919,412	+		Echvi_1653	0.81	-2.3
1,919,413	-		Echvi_1653	0.81	-3.4
1,919,413	-		Echvi_1653	0.81	+0.5
1,919,413	-		Echvi_1653	0.81	+1.5
1,919,417	+		Echvi_1653	0.81	-0.3
1,919,421	+		Echvi_1653	0.82	-2.3
1,919,446	-		Echvi_1653	0.83	+2.4
1,919,529	-		Echvi_1653	0.89	+0.2
1,919,544	+				+1.2
1,919,544	+				+3.1
1,919,545	-				+0.2
1,919,545	-				-0.4
1,919,545	-				-2.1
1,919,545	-				-2.0
1,919,546	+				-0.5
1,919,547	-				-2.3
1,919,548	+				-2.4
1,919,548	+				-2.2
1,919,582	+				-2.2
1,919,582	+				+0.9
1,919,582	+				-2.1
1,919,583	-				+2.5
1,919,583	-				-0.6
1,919,583	-				+3.3
1,919,644	-				+0.5
1,919,644	-				-1.4
1,919,645	+				-1.8
1,919,646	-				-1.8
1,919,646	-				-0.9
1,919,647	+				+3.7
1,919,647	+				+0.6
1,919,648	-				-2.1
1,919,648	-				+2.1
1,919,648	-				+3.7
1,919,648	-				-1.9
1,919,670	+				-0.6
1,919,790	+				-1.8
1,919,791	-				+1.0
1,919,791	-				-1.3
1,919,814	-				-1.2
1,919,878	+				-0.5
1,919,878	+				+0.9
1,919,951	+				+1.3
1,919,954	-				+1.9
1,919,971	-				-0.8
1,920,006	+				+0.4
1,920,031	-		Echvi_1654	0.11	-1.6
1,920,086	+		Echvi_1654	0.12	+0.8
1,920,274	-		Echvi_1654	0.18	-2.7
1,920,274	-		Echvi_1654	0.18	+0.7
1,920,310	+		Echvi_1654	0.19	+0.2
1,920,310	+		Echvi_1654	0.19	+2.0
1,920,310	+		Echvi_1654	0.19	-1.2
1,920,317	+		Echvi_1654	0.20	-0.1
1,920,318	-		Echvi_1654	0.20	+3.0
1,920,318	-		Echvi_1654	0.20	-2.1
1,920,387	+		Echvi_1654	0.22	-1.2
1,920,388	-		Echvi_1654	0.22	-2.6
1,920,430	+		Echvi_1654	0.23	-0.9
1,920,430	+		Echvi_1654	0.23	-0.8
1,920,431	-		Echvi_1654	0.23	+1.8
1,920,435	-		Echvi_1654	0.23	-1.3
1,920,518	+		Echvi_1654	0.26	+1.0
1,920,518	+		Echvi_1654	0.26	-0.9
1,920,582	-		Echvi_1654	0.28	-0.1
1,920,585	-		Echvi_1654	0.28	+0.5
1,920,585	-		Echvi_1654	0.28	-1.2
1,920,585	-		Echvi_1654	0.28	-0.3
1,920,642	-		Echvi_1654	0.30	-0.1