Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1592

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,830,720	-				-0.5
1,830,720	-				-2.3
1,830,842	+				-2.4
1,830,843	-				-0.7
1,830,878	+				-1.2
1,830,878	+				-1.5
1,830,878	+				-3.7
1,830,878	+				-1.8
1,830,878	+				-1.0
1,830,879	-				-2.1
1,830,890	+				-1.4
1,830,890	+				-0.8
1,830,891	-				+2.8
1,830,929	+		Echvi_1592	0.14	-1.6
1,830,984	+		Echvi_1592	0.26	-0.3
1,830,985	-		Echvi_1592	0.26	-0.3
1,830,988	+		Echvi_1592	0.27	-2.4
1,830,989	-		Echvi_1592	0.27	-0.7
1,830,995	+		Echvi_1592	0.28	+0.2
1,830,995	+		Echvi_1592	0.28	-0.7
1,830,995	+		Echvi_1592	0.28	+1.5
1,830,996	-		Echvi_1592	0.29	-2.7
1,830,998	-		Echvi_1592	0.29	-1.2
1,831,015	+		Echvi_1592	0.33	-1.4
1,831,072	-		Echvi_1592	0.46	-1.5
1,831,083	-		Echvi_1592	0.48	-1.5
1,831,104	-		Echvi_1592	0.53	-1.7
1,831,104	-		Echvi_1592	0.53	-0.8
1,831,190	-		Echvi_1592	0.72	-1.3
1,831,190	-		Echvi_1592	0.72	-2.1
1,831,190	-		Echvi_1592	0.72	-1.0
1,831,224	+		Echvi_1592	0.80	-0.5
1,831,225	-		Echvi_1592	0.80	-2.0
1,831,255	+		Echvi_1592	0.87	-1.0
1,831,281	+				-0.8
1,831,281	+				-1.7
1,831,281	+				-1.7
1,831,328	+				+0.9
1,831,364	+				-0.5
1,831,365	-				-2.1
1,831,365	-				-0.7
1,831,365	-				+0.5
1,831,365	-				-0.2
1,831,375	-				+0.2
1,831,375	-				+1.1
1,831,380	-				-0.8
1,831,380	-				+1.4
1,831,450	-				-1.3
1,831,475	+				+0.2
1,831,475	+				-0.5
1,831,529	-		Echvi_1593	0.18	-0.7
1,831,589	-		Echvi_1593	0.28	+2.5
1,831,618	+		Echvi_1593	0.32	+2.5
1,831,664	+		Echvi_1593	0.40	-1.7
1,831,665	-		Echvi_1593	0.40	-0.6
1,831,665	-		Echvi_1593	0.40	-2.0
1,831,926	+		Echvi_1593	0.83	-0.6
1,831,927	-		Echvi_1593	0.83	-0.1
1,831,934	-		Echvi_1593	0.84	-1.0
1,831,959	+		Echvi_1593	0.89	+0.5
1,831,960	-		Echvi_1593	0.89	-0.8
1,831,960	-		Echvi_1593	0.89	-0.3
1,831,960	-		Echvi_1593	0.89	+0.9
1,831,961	+		Echvi_1593	0.89	+0.7
1,831,961	+		Echvi_1593	0.89	-0.3
1,832,127	+				+0.3
1,832,127	+				+1.8
1,832,128	-				-2.7
1,832,129	+				+0.3
1,832,129	+				+3.4
1,832,130	-				+1.9
1,832,130	-				-1.6
1,832,130	-				+4.1
1,832,138	+				+2.9
1,832,190	-				+0.2
1,832,231	-				+2.0
1,832,231	-				-0.8
1,832,277	-				-0.3
1,832,285	-				-3.0
1,832,301	-				+1.3
1,832,312	+				+1.5
1,832,312	+				-2.2