Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1580

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,814,872	+				-1.4
1,814,881	+				-1.7
1,814,942	-		Echvi_1578	0.28	+0.5
1,815,004	-		Echvi_1578	0.59	-1.8
1,815,006	+		Echvi_1578	0.61	+0.5
1,815,006	+		Echvi_1578	0.61	-0.6
1,815,006	+		Echvi_1578	0.61	-1.1
1,815,006	+		Echvi_1578	0.61	-0.2
1,815,006	+		Echvi_1578	0.61	+0.0
1,815,007	-		Echvi_1578	0.61	-2.7
1,815,007	-		Echvi_1578	0.61	-0.6
1,815,007	-		Echvi_1578	0.61	-3.4
1,815,007	-		Echvi_1578	0.61	-3.2
1,815,081	-				+1.5
1,815,146	+				-0.3
1,815,147	-				-1.8
1,815,186	+				-3.2
1,815,210	-				-1.2
1,815,222	-		Echvi_1579	0.11	-0.7
1,815,237	+		Echvi_1579	0.13	-0.1
1,815,280	+		Echvi_1579	0.19	-3.3
1,815,280	+		Echvi_1579	0.19	-1.7
1,815,281	-		Echvi_1579	0.19	-2.2
1,815,281	-		Echvi_1579	0.19	-2.1
1,815,281	-		Echvi_1579	0.19	+0.9
1,815,281	-		Echvi_1579	0.19	+1.2
1,815,292	-		Echvi_1579	0.21	-1.5
1,815,292	-		Echvi_1579	0.21	+1.0
1,815,302	+		Echvi_1579	0.22	+0.6
1,815,303	-		Echvi_1579	0.22	-3.4
1,815,366	+		Echvi_1579	0.31	-1.7
1,815,378	+		Echvi_1579	0.33	-2.5
1,815,424	-		Echvi_1579	0.39	-0.4
1,815,474	+		Echvi_1579	0.46	-1.7
1,815,480	-		Echvi_1579	0.47	-2.5
1,815,558	+		Echvi_1579	0.58	-1.3
1,815,638	+		Echvi_1579	0.69	+1.3
1,815,639	-		Echvi_1579	0.69	-2.3
1,815,639	-		Echvi_1579	0.69	-2.1
1,815,639	-		Echvi_1579	0.69	-1.0
1,815,639	-		Echvi_1579	0.69	-3.4
1,815,796	-				-0.7
1,815,850	-				-3.0
1,815,850	-				-3.0
1,815,869	-				-1.0
1,815,899	+				-4.1
1,815,901	+				-1.5
1,815,930	+				-2.5
1,815,931	-				-0.5
1,815,932	+				-1.5
1,815,932	+				-1.2
1,815,933	-				-3.3
1,815,933	-				+2.5
1,815,933	-				-1.3
1,815,933	-				+1.5
1,815,933	-				-1.7
1,815,941	+				+1.6
1,815,942	-				-2.6
1,815,942	-				-2.0
1,815,990	+				+0.4
1,815,991	-				-4.5
1,815,991	-				-2.7
1,815,991	-				-2.1
1,815,995	+				+0.2
1,815,996	-				-0.7
1,816,106	-		Echvi_1580	0.14	-2.0
1,816,226	+		Echvi_1580	0.21	-2.1
1,816,249	+		Echvi_1580	0.22	-3.9
1,816,249	+		Echvi_1580	0.22	+0.9
1,816,249	+		Echvi_1580	0.22	+1.3
1,816,249	+		Echvi_1580	0.22	+0.5
1,816,250	-		Echvi_1580	0.22	-3.3
1,816,254	-		Echvi_1580	0.22	-2.7
1,816,266	-		Echvi_1580	0.23	-1.9
1,816,342	+		Echvi_1580	0.27	-1.5
1,816,514	+		Echvi_1580	0.37	-2.1
1,816,518	-		Echvi_1580	0.37	+0.8
1,816,539	-		Echvi_1580	0.39	+0.2
1,816,540	+		Echvi_1580	0.39	-1.0
1,816,602	-		Echvi_1580	0.42	-1.7
1,816,640	-		Echvi_1580	0.44	+0.9
1,816,766	-		Echvi_1580	0.52	-2.1
1,816,785	-		Echvi_1580	0.53	-2.1
1,816,790	+		Echvi_1580	0.53	-3.1
1,816,792	+		Echvi_1580	0.53	-2.4
1,816,792	+		Echvi_1580	0.53	-2.6
1,816,792	+		Echvi_1580	0.53	-1.0
1,816,792	+		Echvi_1580	0.53	-2.2
1,816,792	+		Echvi_1580	0.53	+0.2
1,816,856	-		Echvi_1580	0.57	+1.9
1,816,856	-		Echvi_1580	0.57	-0.7
1,816,856	-		Echvi_1580	0.57	+0.9
1,816,863	+		Echvi_1580	0.57	-2.0
1,816,921	+		Echvi_1580	0.60	-1.4
1,817,054	-		Echvi_1580	0.68	-1.4
1,817,056	-		Echvi_1580	0.68	-1.7
1,817,056	-		Echvi_1580	0.68	-3.0
1,817,110	+		Echvi_1580	0.71	+0.5
1,817,111	-		Echvi_1580	0.71	-1.3
1,817,124	-		Echvi_1580	0.72	-4.8
1,817,142	+		Echvi_1580	0.73	-3.1
1,817,143	-		Echvi_1580	0.73	-4.4
1,817,162	-		Echvi_1580	0.74	-0.8
1,817,165	-		Echvi_1580	0.74	-2.2
1,817,183	-		Echvi_1580	0.76	-3.8
1,817,287	-		Echvi_1580	0.81	-0.1
1,817,287	-		Echvi_1580	0.81	+1.4
1,817,287	-		Echvi_1580	0.81	-1.8
1,817,287	-		Echvi_1580	0.81	+0.2
1,817,287	-		Echvi_1580	0.81	-0.7
1,817,287	-		Echvi_1580	0.81	-2.5
1,817,335	+		Echvi_1580	0.84	-2.0
1,817,335	+		Echvi_1580	0.84	-1.4
1,817,336	-		Echvi_1580	0.84	-2.3
1,817,336	-		Echvi_1580	0.84	-1.6
1,817,494	-				-0.8
1,817,538	-				-2.3
1,817,538	-				-3.2
1,817,575	+				-0.1
1,817,575	+				-2.2
1,817,575	+				+0.3
1,817,575	+				-2.6
1,817,576	-				-1.1
1,817,576	-				-2.9
1,817,636	-				+1.3
1,817,704	+				-1.5
1,817,736	-				-1.9
1,817,751	-				-0.7
1,817,751	-				-2.9
1,818,026	+				+0.4
1,818,040	-				+2.0
1,818,144	-		Echvi_1581	0.15	-1.3
1,818,153	-		Echvi_1581	0.17	-3.5
1,818,171	-		Echvi_1581	0.19	-1.6
1,818,171	-		Echvi_1581	0.19	-1.7
1,818,225	+		Echvi_1581	0.27	-1.1
1,818,225	+		Echvi_1581	0.27	+2.6
1,818,225	+		Echvi_1581	0.27	-2.7
1,818,225	+		Echvi_1581	0.27	-2.3
1,818,225	+		Echvi_1581	0.27	+0.3
1,818,225	+		Echvi_1581	0.27	-2.3
1,818,302	-		Echvi_1581	0.38	+0.6
1,818,345	-		Echvi_1581	0.44	+4.1
1,818,345	-		Echvi_1581	0.44	+2.2
1,818,353	-		Echvi_1581	0.45	+0.5
1,818,472	+		Echvi_1581	0.63	-1.1
1,818,472	+		Echvi_1581	0.63	+0.6
1,818,473	-		Echvi_1581	0.63	-1.0
1,818,473	-		Echvi_1581	0.63	-0.6
1,818,474	+		Echvi_1581	0.63	-3.0
1,818,474	+		Echvi_1581	0.63	+0.4
1,818,474	+		Echvi_1581	0.63	+0.3
1,818,475	-		Echvi_1581	0.63	+0.2
1,818,475	-		Echvi_1581	0.63	+1.6
1,818,485	-		Echvi_1581	0.65	-0.3
1,818,537	-		Echvi_1581	0.72	+1.4
1,818,543	+		Echvi_1581	0.73	-2.0