Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1553

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,781,975	+		Echvi_1551	0.87	+2.4
1,782,040	+		Echvi_1551	0.89	-0.9
1,782,047	+		Echvi_1551	0.89	-1.4
1,782,276	+				-0.6
1,782,276	+				+2.3
1,782,277	-				+1.5
1,782,277	-				-1.3
1,782,277	-				+0.7
1,782,277	-				-1.8
1,782,277	-				+1.1
1,782,279	+				-2.3
1,782,279	+				+1.8
1,782,280	-				-0.3
1,782,283	+				-0.3
1,782,283	+				+3.2
1,782,283	+				-0.7
1,782,283	+				+1.3
1,782,284	-				+0.9
1,782,284	-				+1.7
1,782,333	-				+0.6
1,782,381	+				-0.4
1,782,381	+				+3.1
1,782,382	-				+1.6
1,782,388	-				-2.0
1,782,391	-				-1.1
1,782,391	-				+0.6
1,782,397	+				+0.4
1,782,397	+				-0.5
1,782,398	-				-0.9
1,782,398	-				+0.2
1,782,398	-				+2.5
1,782,399	+				+1.0
1,782,399	+				-1.1
1,782,400	-				+1.7
1,782,400	-				-0.9
1,782,400	-				-1.4
1,782,400	-				-0.3
1,782,400	-				-2.7
1,782,409	+				+1.3
1,782,415	-				+1.6
1,782,415	-				-2.0
1,782,423	-				-2.1
1,782,423	-				-1.2
1,782,431	-				-2.5
1,782,456	+				-2.2
1,782,456	+				+1.4
1,782,457	-				+1.5
1,782,462	+				+0.5
1,782,462	+				-2.0
1,782,463	-				-0.7
1,782,463	-				-0.3
1,782,463	-				+2.1
1,782,472	+				+1.1
1,782,563	+				+0.9
1,782,564	-				-0.5
1,782,564	-				-1.1
1,782,572	+				+1.2
1,782,573	-				-2.2
1,782,595	+				+0.1
1,782,595	+				+1.4
1,782,596	-				+0.9
1,782,606	+				+1.4
1,782,607	-				+0.8
1,782,659	-				+0.5
1,782,680	+				-0.1
1,782,680	+				+1.2
1,782,690	+		Echvi_1552	0.10	+1.7
1,782,691	-		Echvi_1552	0.11	+1.5
1,782,727	+		Echvi_1552	0.25	+0.5
1,782,761	-		Echvi_1552	0.39	+2.2
1,782,832	-		Echvi_1552	0.68	-0.7
1,782,894	+				+0.1
1,782,894	+				-0.2
1,782,895	-				-1.4
1,782,895	-				-3.4
1,782,982	+				+0.5
1,782,988	+				-0.3
1,782,988	+				-3.3
1,782,988	+				-1.8
1,782,988	+				+1.9
1,782,988	+				-0.3
1,782,989	-				-2.5
1,782,989	-				+0.2
1,782,989	-				+1.0
1,782,989	-				+0.2
1,782,996	-				+1.3
1,782,999	+				-1.3
1,783,000	-				+0.3
1,783,009	+				-1.2
1,783,010	-				+1.1
1,783,017	+				+0.5
1,783,065	+		Echvi_1553	0.13	+1.5
1,783,066	-		Echvi_1553	0.13	-0.9
1,783,100	-		Echvi_1553	0.17	-2.5
1,783,121	+		Echvi_1553	0.20	+2.5
1,783,122	-		Echvi_1553	0.20	-0.9
1,783,161	+		Echvi_1553	0.25	+2.9
1,783,182	-		Echvi_1553	0.28	-0.1
1,783,182	-		Echvi_1553	0.28	+0.2
1,783,198	-		Echvi_1553	0.30	-1.3
1,783,235	+		Echvi_1553	0.34	-0.7
1,783,254	+		Echvi_1553	0.37	-0.8
1,783,254	+		Echvi_1553	0.37	+1.3
1,783,254	+		Echvi_1553	0.37	-0.2
1,783,257	-		Echvi_1553	0.37	-0.0
1,783,267	+		Echvi_1553	0.38	-3.0
1,783,268	-		Echvi_1553	0.39	+2.0
1,783,301	-		Echvi_1553	0.43	+1.5
1,783,308	+		Echvi_1553	0.44	+0.2
1,783,392	-		Echvi_1553	0.54	+2.0
1,783,431	+		Echvi_1553	0.59	+0.7
1,783,432	-		Echvi_1553	0.60	-1.3
1,783,432	-		Echvi_1553	0.60	+1.2
1,783,432	-		Echvi_1553	0.60	-0.7
1,783,432	-		Echvi_1553	0.60	+1.3
1,783,433	+		Echvi_1553	0.60	-1.3
1,783,433	+		Echvi_1553	0.60	-0.7
1,783,434	-		Echvi_1553	0.60	+2.6
1,783,440	-		Echvi_1553	0.61	-1.2
1,783,512	-		Echvi_1553	0.70	+2.4
1,783,512	-		Echvi_1553	0.70	+2.1
1,783,531	+		Echvi_1553	0.72	+1.1
1,783,548	-		Echvi_1553	0.74	-0.5
1,783,644	+		Echvi_1553	0.87	+1.2
1,783,644	+		Echvi_1553	0.87	-0.1
1,783,657	-		Echvi_1553	0.88	-1.2
1,783,674	+				+2.7
1,783,693	+				+0.8
1,783,793	-				+2.4
1,783,829	+				+1.1
1,783,843	+				-0.1
1,783,871	+				-1.6
1,783,872	-				-0.4
1,783,884	-				-2.1
1,783,888	-				+1.8
1,783,888	-				+2.8
1,783,891	+				+0.1
1,783,903	+				+0.9
1,783,903	+				-3.0
1,783,903	+				+1.6
1,783,904	-				-0.5
1,783,904	-				+0.9
1,783,905	+				+3.0
1,783,934	+				-0.2
1,783,934	+				+0.2
1,783,935	-				+2.7
1,784,048	+		Echvi_1554	0.30	+0.3
1,784,085	+		Echvi_1554	0.39	+1.7
1,784,085	+		Echvi_1554	0.39	+1.5
1,784,085	+		Echvi_1554	0.39	+0.9
1,784,085	+		Echvi_1554	0.39	+0.1
1,784,158	+		Echvi_1554	0.56	-0.1
1,784,163	+		Echvi_1554	0.57	+1.1
1,784,175	+		Echvi_1554	0.59	+0.6
1,784,175	+		Echvi_1554	0.59	+1.3
1,784,304	-		Echvi_1554	0.89	+0.2
1,784,304	-		Echvi_1554	0.89	+2.4
1,784,309	-				+1.0
1,784,313	+				-1.7
1,784,313	+				+0.5
1,784,314	-				+0.0
1,784,382	-				-2.7
1,784,382	-				-1.9
1,784,382	-				+1.4
1,784,382	-				+0.9
1,784,395	-				-1.9
1,784,395	-				-0.3
1,784,401	-				-2.3
1,784,401	-				+0.7
1,784,401	-				-1.2
1,784,487	+				+0.9
1,784,535	-				-0.6
1,784,581	+				-0.4
1,784,619	+				+0.7
1,784,619	+				-0.1
1,784,619	+				-2.1
1,784,620	-				+0.7
1,784,623	-				+0.4
1,784,724	+		Echvi_1555	0.29	-1.1
1,784,724	+		Echvi_1555	0.29	+0.6
1,784,735	+		Echvi_1555	0.31	-3.2
1,784,735	+		Echvi_1555	0.31	-1.5