Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1485

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,699,456	-				+3.5
1,699,456	-				+0.0
1,699,456	-				+0.3
1,699,456	-				-1.2
1,699,557	+		Echvi_1484	0.19	-0.5
1,699,557	+		Echvi_1484	0.19	-1.2
1,699,558	-		Echvi_1484	0.19	+1.0
1,699,558	-		Echvi_1484	0.19	+0.5
1,699,558	-		Echvi_1484	0.19	+1.5
1,699,619	+		Echvi_1484	0.25	+0.6
1,699,619	+		Echvi_1484	0.25	-0.0
1,699,620	-		Echvi_1484	0.25	+1.2
1,699,621	+		Echvi_1484	0.25	-2.7
1,699,621	+		Echvi_1484	0.25	+1.8
1,699,622	-		Echvi_1484	0.26	-3.6
1,699,622	-		Echvi_1484	0.26	-0.6
1,699,661	-		Echvi_1484	0.29	-2.3
1,699,705	-		Echvi_1484	0.34	+1.5
1,699,705	-		Echvi_1484	0.34	+1.5
1,699,730	+		Echvi_1484	0.36	+0.8
1,699,731	-		Echvi_1484	0.36	+1.4
1,699,731	-		Echvi_1484	0.36	-0.0
1,699,761	+		Echvi_1484	0.39	+3.6
1,699,761	+		Echvi_1484	0.39	+0.9
1,699,761	+		Echvi_1484	0.39	+0.5
1,699,836	+		Echvi_1484	0.47	-0.4
1,699,848	-		Echvi_1484	0.48	+2.4
1,699,881	+		Echvi_1484	0.51	-2.0
1,699,982	-		Echvi_1484	0.61	+0.7
1,699,982	-		Echvi_1484	0.61	+1.9
1,700,014	-		Echvi_1484	0.65	-0.5
1,700,034	+		Echvi_1484	0.67	-0.3
1,700,035	-		Echvi_1484	0.67	+4.4
1,700,155	-		Echvi_1484	0.79	+2.2
1,700,155	-		Echvi_1484	0.79	+1.5
1,700,155	-		Echvi_1484	0.79	+0.4
1,700,157	+		Echvi_1484	0.79	-0.2
1,700,199	+		Echvi_1484	0.83	+1.3
1,700,199	+		Echvi_1484	0.83	+2.2
1,700,199	+		Echvi_1484	0.83	-3.3
1,700,199	+		Echvi_1484	0.83	+1.6
1,700,200	-		Echvi_1484	0.83	-1.6
1,700,202	+		Echvi_1484	0.83	+1.0
1,700,202	+		Echvi_1484	0.83	+1.8
1,700,202	+		Echvi_1484	0.83	+2.0
1,700,227	-		Echvi_1484	0.86	-2.0
1,700,237	-		Echvi_1484	0.87	-1.0
1,700,267	+		Echvi_1484	0.90	+1.4
1,700,268	-		Echvi_1484	0.90	+2.3
1,700,272	+				+0.8
1,700,272	+				+0.4
1,700,273	-				-0.7
1,700,294	+				-2.8
1,700,294	+				-2.8
1,700,294	+				-1.3
1,700,294	+				-0.8
1,700,294	+				+0.6
1,700,311	+				+0.6
1,700,312	-				+2.3
1,700,328	-				+0.4
1,700,351	+				+1.5
1,700,351	+				-0.4
1,700,352	-				+1.5
1,700,354	-				-1.7
1,700,354	-				+1.2
1,700,358	-				+2.2
1,700,373	+				+3.9
1,700,396	-				+0.2
1,700,396	-				-1.6
1,700,400	+				+0.7
1,700,400	+				+0.9
1,700,412	-				+2.4
1,700,450	+		Echvi_1485	0.11	-3.0
1,700,451	-		Echvi_1485	0.11	-0.5
1,700,462	+		Echvi_1485	0.13	-0.3
1,700,463	-		Echvi_1485	0.13	-1.8
1,700,484	-		Echvi_1485	0.16	+1.8
1,700,484	-		Echvi_1485	0.16	+0.3
1,700,484	-		Echvi_1485	0.16	+1.7
1,700,509	+		Echvi_1485	0.20	+3.6
1,700,510	-		Echvi_1485	0.20	-0.2
1,700,527	+		Echvi_1485	0.22	+0.6
1,700,527	+		Echvi_1485	0.22	+0.5
1,700,528	-		Echvi_1485	0.23	-1.7
1,700,538	-		Echvi_1485	0.24	+0.6
1,700,540	+		Echvi_1485	0.24	+0.5
1,700,540	+		Echvi_1485	0.24	+2.3
1,700,540	+		Echvi_1485	0.24	-0.2
1,700,541	-		Echvi_1485	0.24	-0.1
1,700,541	-		Echvi_1485	0.24	-0.8
1,700,572	+		Echvi_1485	0.29	+2.2
1,700,572	+		Echvi_1485	0.29	+2.2
1,700,573	-		Echvi_1485	0.29	-1.0
1,700,713	+		Echvi_1485	0.49	+0.4
1,700,725	-		Echvi_1485	0.51	-2.3
1,700,725	-		Echvi_1485	0.51	-0.3
1,700,730	+		Echvi_1485	0.52	-0.1
1,700,731	-		Echvi_1485	0.52	-0.8
1,700,731	-		Echvi_1485	0.52	-0.8
1,700,731	-		Echvi_1485	0.52	-0.5
1,700,732	+		Echvi_1485	0.52	-0.6
1,700,732	+		Echvi_1485	0.52	+1.4
1,700,732	+		Echvi_1485	0.52	+1.6
1,700,733	-		Echvi_1485	0.52	-2.0
1,700,733	-		Echvi_1485	0.52	-0.3
1,700,733	-		Echvi_1485	0.52	+1.8
1,700,733	-		Echvi_1485	0.52	-2.6
1,700,768	+		Echvi_1485	0.57	+1.1
1,700,776	+		Echvi_1485	0.58	+1.5
1,700,831	+		Echvi_1485	0.66	-0.6
1,700,831	+		Echvi_1485	0.66	+0.4
1,700,831	+		Echvi_1485	0.66	-1.1
1,700,832	-		Echvi_1485	0.66	-1.1
1,700,847	-		Echvi_1485	0.69	+1.0
1,700,852	+		Echvi_1485	0.69	+1.5
1,700,852	+		Echvi_1485	0.69	-0.8
1,700,853	-		Echvi_1485	0.69	-1.5
1,700,884	+		Echvi_1485	0.74	-0.7
1,700,885	-		Echvi_1485	0.74	+3.6
1,700,885	-		Echvi_1485	0.74	-1.3
1,700,885	-		Echvi_1485	0.74	+1.3
1,700,885	-		Echvi_1485	0.74	+0.8
1,700,885	-		Echvi_1485	0.74	+3.5
1,700,885	-		Echvi_1485	0.74	+1.1
1,700,901	-		Echvi_1485	0.76	+0.2
1,700,917	+		Echvi_1485	0.79	-0.1
1,700,931	+		Echvi_1485	0.81	+2.7
1,700,956	-		Echvi_1485	0.84	+0.7
1,700,963	-		Echvi_1485	0.85	-0.4
1,700,963	-		Echvi_1485	0.85	+0.7
1,700,972	+		Echvi_1485	0.87	+1.5
1,700,972	+		Echvi_1485	0.87	+2.5
1,700,975	+		Echvi_1485	0.87	+0.3
1,701,089	+				+1.4
1,701,151	+				+2.5
1,701,165	-				-0.1
1,701,195	+				-1.0
1,701,195	+				-1.6
1,701,228	+				-0.3
1,701,229	-				+0.9
1,701,229	-				-1.0
1,701,232	+				+0.2
1,701,233	-				-0.5
1,701,233	-				+1.2
1,701,235	-				+0.2
1,701,253	+				-1.0
1,701,264	+				-1.8
1,701,265	-				-1.2
1,701,267	-				-1.6
1,701,273	+				+0.0
1,701,332	+				+0.9
1,701,332	+				-0.1
1,701,332	+				-1.3
1,701,332	+				-1.7
1,701,333	-				-2.4
1,701,334	+				-2.0
1,701,407	+				-1.8
1,701,408	-				-0.5
1,701,408	-				-1.3
1,701,415	+				+1.7
1,701,415	+				-0.8
1,701,416	-				+0.5
1,701,416	-				-2.3
1,701,458	-		Echvi_1486	0.10	-1.6
1,701,507	+		Echvi_1486	0.12	+0.9
1,701,508	-		Echvi_1486	0.12	-0.8
1,701,508	-		Echvi_1486	0.12	-0.6
1,701,546	+		Echvi_1486	0.13	+0.4
1,701,547	-		Echvi_1486	0.13	+0.8
1,701,547	-		Echvi_1486	0.13	-1.8
1,701,618	-		Echvi_1486	0.15	-3.5
1,701,673	+		Echvi_1486	0.16	+2.5
1,701,673	+		Echvi_1486	0.16	-1.8
1,701,674	-		Echvi_1486	0.16	+2.4
1,701,737	-		Echvi_1486	0.18	-0.4
1,701,779	-		Echvi_1486	0.20	+0.4
1,701,783	-		Echvi_1486	0.20	+0.5
1,701,817	+		Echvi_1486	0.21	-0.2
1,701,818	-		Echvi_1486	0.21	-2.5
1,701,902	-		Echvi_1486	0.23	+1.7
1,701,929	+		Echvi_1486	0.24	+0.3
1,701,929	+		Echvi_1486	0.24	-1.1
1,701,930	-		Echvi_1486	0.24	-1.1
1,701,941	-		Echvi_1486	0.24	-2.1
1,701,941	-		Echvi_1486	0.24	+2.6
1,701,941	-		Echvi_1486	0.24	+1.4
1,701,949	+		Echvi_1486	0.24	+1.3
1,701,968	-		Echvi_1486	0.25	-1.1
1,701,972	+		Echvi_1486	0.25	+0.9
1,701,972	+		Echvi_1486	0.25	-1.3
1,701,972	+		Echvi_1486	0.25	+3.7
1,701,973	-		Echvi_1486	0.25	+0.2
1,701,973	-		Echvi_1486	0.25	+1.5
1,701,979	-		Echvi_1486	0.25	+0.5
1,702,040	-		Echvi_1486	0.27	-0.6
1,702,060	+		Echvi_1486	0.28	-1.2
1,702,060	+		Echvi_1486	0.28	-3.5
1,702,061	-		Echvi_1486	0.28	-4.3