Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1454

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,665,754	-		Echvi_1452	0.84	-2.9
1,665,834	+				-2.7
1,665,869	-				+1.6
1,665,917	-				-1.9
1,665,950	+				-2.0
1,666,190	+				+0.8
1,666,195	-				-0.4
1,666,219	-				+0.7
1,666,255	-		Echvi_1453	0.17	-1.4
1,666,289	-		Echvi_1453	0.27	+1.2
1,666,344	-		Echvi_1453	0.43	-3.9
1,666,348	+		Echvi_1453	0.44	-0.6
1,666,348	+		Echvi_1453	0.44	+0.3
1,666,362	+		Echvi_1453	0.48	-0.5
1,666,380	-		Echvi_1453	0.54	-1.2
1,666,386	-		Echvi_1453	0.55	-1.6
1,666,431	-		Echvi_1453	0.69	-1.8
1,666,454	+		Echvi_1453	0.76	-1.1
1,666,455	-		Echvi_1453	0.76	+1.7
1,666,495	+		Echvi_1453	0.88	-1.2
1,666,534	+				+0.5
1,666,535	-				-0.2
1,666,535	-				-1.0
1,666,540	-				-1.9
1,666,573	+				-1.8
1,666,574	-				-0.5
1,666,574	-				-1.5
1,666,662	+				-0.7
1,666,701	+				-3.5
1,666,702	-				-0.4
1,666,702	-				-1.1
1,666,702	-				+1.3
1,666,725	+		Echvi_1454	0.10	+1.4
1,666,726	-		Echvi_1454	0.10	+1.2
1,666,726	-		Echvi_1454	0.10	-2.4
1,666,734	+		Echvi_1454	0.11	+0.2
1,666,782	-		Echvi_1454	0.15	+1.0
1,666,789	-		Echvi_1454	0.15	+0.3
1,666,798	+		Echvi_1454	0.16	+1.3
1,666,799	-		Echvi_1454	0.16	+1.5
1,666,816	-		Echvi_1454	0.18	+1.3
1,666,878	+		Echvi_1454	0.23	-3.3
1,666,878	+		Echvi_1454	0.23	-2.0
1,666,878	+		Echvi_1454	0.23	-2.3
1,666,879	-		Echvi_1454	0.23	+1.5
1,666,879	-		Echvi_1454	0.23	+1.3
1,666,879	-		Echvi_1454	0.23	-0.8
1,666,882	+		Echvi_1454	0.23	+0.8
1,666,884	+		Echvi_1454	0.23	-3.1
1,666,885	-		Echvi_1454	0.23	-0.1
1,666,897	-		Echvi_1454	0.24	-0.2
1,666,897	-		Echvi_1454	0.24	-1.8
1,666,897	-		Echvi_1454	0.24	+0.3
1,666,914	+		Echvi_1454	0.25	-1.1
1,667,014	+		Echvi_1454	0.34	+0.5
1,667,014	+		Echvi_1454	0.34	+0.9
1,667,015	-		Echvi_1454	0.34	+0.2
1,667,015	-		Echvi_1454	0.34	+1.3
1,667,015	-		Echvi_1454	0.34	-1.8
1,667,040	-		Echvi_1454	0.36	+0.5
1,667,040	-		Echvi_1454	0.36	-1.2
1,667,043	+		Echvi_1454	0.36	-1.0
1,667,043	+		Echvi_1454	0.36	-1.4
1,667,043	+		Echvi_1454	0.36	+1.4
1,667,155	+		Echvi_1454	0.45	+2.2
1,667,156	-		Echvi_1454	0.45	-0.5
1,667,156	-		Echvi_1454	0.45	-0.4
1,667,156	-		Echvi_1454	0.45	+0.9
1,667,183	-		Echvi_1454	0.47	-2.8
1,667,183	-		Echvi_1454	0.47	+2.1
1,667,217	+		Echvi_1454	0.50	-1.0
1,667,218	-		Echvi_1454	0.50	-1.2
1,667,218	-		Echvi_1454	0.50	-1.3
1,667,227	-		Echvi_1454	0.51	+1.1
1,667,252	+		Echvi_1454	0.53	+0.9
1,667,328	-		Echvi_1454	0.59	-0.5
1,667,381	-		Echvi_1454	0.63	-0.4
1,667,406	+		Echvi_1454	0.65	+4.1
1,667,406	+		Echvi_1454	0.65	+2.1
1,667,514	-		Echvi_1454	0.74	+3.3
1,667,542	-		Echvi_1454	0.76	+1.4
1,667,564	+		Echvi_1454	0.78	-0.8
1,667,719	+				-0.2
1,667,719	+				-2.5
1,667,719	+				-1.8
1,667,720	-				-1.5
1,667,720	-				+0.7
1,667,793	+				+0.9
1,667,793	+				-0.1
1,667,794	-				+3.2
1,667,794	-				+1.5
1,667,794	-				-0.4
1,667,794	-				+0.9
1,667,920	+				-1.4
1,667,921	-				-1.8
1,667,978	-				+1.0
1,667,992	+				+3.2
1,668,014	+				+0.9
1,668,056	+				-0.7
1,668,105	+				-0.1
1,668,111	+				-2.2
1,668,193	-				-0.2
1,668,193	-				+1.2
1,668,251	+				-1.7
1,668,252	-				+0.9
1,668,301	+				+0.5
1,668,301	+				+1.1
1,668,301	+				+0.2
1,668,302	-				+1.5
1,668,319	-				-2.9
1,668,347	+				-2.0
1,668,349	+				-0.5
1,668,349	+				+0.4
1,668,350	-				-1.1
1,668,388	+				-3.1
1,668,415	+				+0.3
1,668,416	-				+0.5
1,668,437	+				-2.4
1,668,437	+				+0.0
1,668,437	+				-2.5
1,668,456	+				+0.7
1,668,456	+				+0.1
1,668,457	-				-0.5
1,668,475	+				-0.2
1,668,475	+				-0.8
1,668,567	-				-0.4
1,668,567	-				-0.7
1,668,567	-				-0.7
1,668,654	-				-0.2
1,668,659	+				-1.2
1,668,712	-				+0.2