Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1414

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,628,690	+		Echvi_1411	0.79	+1.2
1,628,719	+		Echvi_1411	0.82	-0.5
1,628,720	-		Echvi_1411	0.82	+0.2
1,628,720	-		Echvi_1411	0.82	+0.2
1,628,720	-		Echvi_1411	0.82	-1.9
1,628,720	-		Echvi_1411	0.82	+0.8
1,628,726	+		Echvi_1411	0.83	+0.5
1,628,727	-		Echvi_1411	0.83	+1.1
1,628,785	+		Echvi_1411	0.88	+1.8
1,628,794	-		Echvi_1411	0.89	-0.6
1,628,794	-		Echvi_1411	0.89	-0.2
1,628,847	-				+2.0
1,628,850	+				+1.2
1,628,851	-				+1.4
1,628,855	-				-2.1
1,628,883	+				+1.5
1,628,884	-				+0.8
1,628,884	-				-1.1
1,628,886	-				-1.1
1,628,914	-				+1.1
1,628,922	-				-2.2
1,628,922	-				-1.9
1,628,940	+				-2.1
1,628,941	-				-1.0
1,628,942	+				-0.9
1,628,942	+				+2.1
1,628,942	+				-1.1
1,628,943	-				+0.6
1,628,943	-				+1.3
1,628,943	-				+1.0
1,628,943	-				-1.4
1,628,943	-				-0.1
1,628,943	-				+1.3
1,628,943	-				-1.7
1,628,943	-				+1.5
1,628,944	+				+1.1
1,628,944	+				+1.1
1,628,944	+				-1.8
1,628,944	+				+1.9
1,628,945	-				-1.6
1,628,945	-				-0.3
1,628,945	-				+3.4
1,628,946	+				-0.3
1,628,946	+				+0.6
1,628,947	-				+1.9
1,628,947	-				-1.8
1,628,986	+				-1.8
1,629,032	+		Echvi_1412	0.18	-1.5
1,629,032	+		Echvi_1412	0.18	+0.3
1,629,032	+		Echvi_1412	0.18	+1.5
1,629,033	-		Echvi_1412	0.18	-2.2
1,629,033	-		Echvi_1412	0.18	+0.3
1,629,035	+		Echvi_1412	0.19	-0.6
1,629,056	+		Echvi_1412	0.25	-1.7
1,629,057	-		Echvi_1412	0.26	+1.3
1,629,105	+		Echvi_1412	0.41	+4.1
1,629,105	+		Echvi_1412	0.41	+1.1
1,629,108	-		Echvi_1412	0.42	-2.2
1,629,108	-		Echvi_1412	0.42	-0.5
1,629,108	-		Echvi_1412	0.42	-1.6
1,629,108	-		Echvi_1412	0.42	-0.6
1,629,111	+		Echvi_1412	0.43	+0.1
1,629,213	-		Echvi_1412	0.75	-0.1
1,629,216	-		Echvi_1412	0.76	-1.0
1,629,224	+		Echvi_1412	0.79	-0.7
1,629,225	-		Echvi_1412	0.79	-1.8
1,629,263	+				-0.4
1,629,263	+				-0.7
1,629,280	+				+1.2
1,629,281	-				+0.0
1,629,281	-				-0.2
1,629,289	-				+0.3
1,629,315	-				+2.1
1,629,315	-				+0.6
1,629,323	-				-2.6
1,629,328	-				-0.7
1,629,337	+				+0.1
1,629,439	-		Echvi_1413	0.36	-1.0
1,629,439	-		Echvi_1413	0.36	+0.2
1,629,439	-		Echvi_1413	0.36	-1.0
1,629,538	+		Echvi_1413	0.73	-2.0
1,629,538	+		Echvi_1413	0.73	+0.6
1,629,539	-		Echvi_1413	0.73	-1.2
1,629,573	+		Echvi_1413	0.86	+2.8
1,629,640	-				+2.2
1,629,680	+				+1.0
1,629,681	-				+3.0
1,629,681	-				+2.3
1,629,681	-				-1.1
1,629,692	+				-1.5
1,629,693	-				-2.7
1,629,708	+				-2.2
1,629,708	+				+2.1
1,629,711	+				-1.4
1,629,711	+				-0.7
1,629,777	+		Echvi_1414	0.12	-2.3
1,629,777	+		Echvi_1414	0.12	-0.9
1,629,778	-		Echvi_1414	0.12	+0.6
1,629,804	+		Echvi_1414	0.15	-0.9
1,629,805	-		Echvi_1414	0.15	-1.7
1,629,805	-		Echvi_1414	0.15	+0.9
1,629,828	+		Echvi_1414	0.18	-1.9
1,629,828	+		Echvi_1414	0.18	+1.1
1,629,829	-		Echvi_1414	0.18	-2.2
1,629,829	-		Echvi_1414	0.18	-2.6
1,629,830	+		Echvi_1414	0.18	-0.4
1,629,830	+		Echvi_1414	0.18	+0.1
1,629,830	+		Echvi_1414	0.18	-2.7
1,629,830	+		Echvi_1414	0.18	-1.3
1,629,831	-		Echvi_1414	0.18	-0.1
1,629,861	+		Echvi_1414	0.22	+0.3
1,629,862	-		Echvi_1414	0.22	-2.5
1,629,883	+		Echvi_1414	0.24	+0.5
1,629,884	-		Echvi_1414	0.25	+0.9
1,629,984	-		Echvi_1414	0.37	-0.1
1,630,088	-		Echvi_1414	0.49	+3.1
1,630,163	+		Echvi_1414	0.58	+1.4
1,630,163	+		Echvi_1414	0.58	-1.3
1,630,199	+		Echvi_1414	0.63	+0.9
1,630,199	+		Echvi_1414	0.63	+1.5
1,630,203	-		Echvi_1414	0.63	-0.1
1,630,203	-		Echvi_1414	0.63	-1.5
1,630,218	-		Echvi_1414	0.65	+2.1
1,630,252	+		Echvi_1414	0.69	+0.5
1,630,253	-		Echvi_1414	0.69	-0.4
1,630,329	+		Echvi_1414	0.79	-0.0
1,630,329	+		Echvi_1414	0.79	+2.0
1,630,330	-		Echvi_1414	0.79	+0.7
1,630,330	-		Echvi_1414	0.79	-0.3
1,630,330	-		Echvi_1414	0.79	-1.3
1,630,354	-		Echvi_1414	0.82	-2.4
1,630,445	-				-2.1
1,630,463	+				-1.9
1,630,463	+				+1.0
1,630,464	-				-3.1
1,630,464	-				-2.8
1,630,495	+				-2.4
1,630,495	+				+1.3
1,630,496	-				+4.1
1,630,496	-				-3.0
1,630,499	+				+2.3
1,630,499	+				-2.7
1,630,499	+				-2.3
1,630,499	+				+2.8
1,630,500	-				-2.7
1,630,500	-				-0.7
1,630,500	-				+0.9
1,630,504	-				+0.1
1,630,529	+				-1.9
1,630,542	+				-1.8
1,630,543	-				+2.1
1,630,554	+				-0.3
1,630,555	-				+2.4
1,630,555	-				+1.3
1,630,608	+		Echvi_1415	0.11	-0.0
1,630,622	+		Echvi_1415	0.13	-1.7
1,630,731	+		Echvi_1415	0.30	-2.7
1,630,732	-		Echvi_1415	0.30	+2.2
1,630,750	-		Echvi_1415	0.33	-0.7
1,630,750	-		Echvi_1415	0.33	+0.5
1,630,765	+		Echvi_1415	0.35	-1.0
1,630,790	+		Echvi_1415	0.39	-1.9
1,630,914	+		Echvi_1415	0.58	+2.3
1,630,916	+		Echvi_1415	0.59	+1.5
1,630,918	+		Echvi_1415	0.59	+2.1
1,630,918	+		Echvi_1415	0.59	+0.8
1,630,919	-		Echvi_1415	0.59	-0.3
1,630,919	-		Echvi_1415	0.59	-1.7
1,630,922	+		Echvi_1415	0.60	-1.7
1,630,922	+		Echvi_1415	0.60	-0.3
1,630,922	+		Echvi_1415	0.60	-3.4
1,630,922	+		Echvi_1415	0.60	-1.2
1,630,922	+		Echvi_1415	0.60	+1.6
1,630,923	-		Echvi_1415	0.60	-0.2
1,630,923	-		Echvi_1415	0.60	-0.8
1,630,965	+		Echvi_1415	0.66	-0.1
1,630,966	-		Echvi_1415	0.67	+0.2
1,630,968	+		Echvi_1415	0.67	+1.1
1,630,969	-		Echvi_1415	0.67	-0.0
1,630,969	-		Echvi_1415	0.67	-0.6
1,630,977	+		Echvi_1415	0.68	-0.1
1,630,977	+		Echvi_1415	0.68	-0.0
1,631,032	+		Echvi_1415	0.77	+0.9
1,631,049	+		Echvi_1415	0.79	-1.2
1,631,049	+		Echvi_1415	0.79	+2.5
1,631,103	+		Echvi_1415	0.88	-3.4
1,631,124	-				+2.8
1,631,145	+				-2.9
1,631,148	+				-2.6
1,631,148	+				+0.7
1,631,148	+				-0.3
1,631,149	-				-1.5
1,631,235	+				+4.1
1,631,235	+				+1.5
1,631,236	-				+1.7
1,631,236	-				-0.4
1,631,262	+				-0.4
1,631,262	+				-1.2
1,631,263	-				+0.1
1,631,282	+				-2.9
1,631,288	-				+0.1
1,631,295	-				+1.6
1,631,308	-				+1.1
1,631,308	-				-0.7
1,631,312	-				+1.8
1,631,394	-		Echvi_1416	0.17	-1.1
1,631,417	+		Echvi_1416	0.22	-1.2
1,631,417	+		Echvi_1416	0.22	+0.5
1,631,417	+		Echvi_1416	0.22	+0.2
1,631,417	+		Echvi_1416	0.22	-3.2
1,631,417	+		Echvi_1416	0.22	-0.7
1,631,418	-		Echvi_1416	0.22	-1.0
1,631,418	-		Echvi_1416	0.22	+1.1
1,631,418	-		Echvi_1416	0.22	+0.6
1,631,418	-		Echvi_1416	0.22	-1.1
1,631,438	+		Echvi_1416	0.27	+3.0
1,631,443	-		Echvi_1416	0.28	-3.1
1,631,458	+		Echvi_1416	0.31	-0.2
1,631,496	-		Echvi_1416	0.39	+0.2