Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1397

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,610,665	+		Echvi_1396	0.24	-2.2
1,610,684	-		Echvi_1396	0.26	-2.2
1,610,708	+		Echvi_1396	0.28	+1.0
1,610,709	-		Echvi_1396	0.28	-1.4
1,610,709	-		Echvi_1396	0.28	-2.9
1,610,710	+		Echvi_1396	0.28	+0.3
1,610,710	+		Echvi_1396	0.28	-0.1
1,610,714	+		Echvi_1396	0.28	+1.4
1,610,715	-		Echvi_1396	0.28	-1.4
1,610,715	-		Echvi_1396	0.28	+1.5
1,610,736	+		Echvi_1396	0.30	+1.6
1,610,768	+		Echvi_1396	0.32	-0.7
1,610,768	+		Echvi_1396	0.32	+0.0
1,610,768	+		Echvi_1396	0.32	+1.5
1,610,769	-		Echvi_1396	0.33	+0.1
1,610,769	-		Echvi_1396	0.33	+2.6
1,610,769	-				+1.5
1,610,770	+		Echvi_1396	0.33	+0.6
1,610,770	+		Echvi_1396	0.33	-1.2
1,610,770	+		Echvi_1396	0.33	+0.2
1,610,812	+		Echvi_1396	0.36	-1.3
1,610,813	-		Echvi_1396	0.36	-0.1
1,610,834	-		Echvi_1396	0.38	-2.5
1,610,846	+		Echvi_1396	0.39	-1.4
1,611,080	+		Echvi_1396	0.57	+2.1
1,611,167	+		Echvi_1396	0.64	-1.8
1,611,179	+		Echvi_1396	0.64	+0.0
1,611,179	+		Echvi_1396	0.64	-1.9
1,611,184	-		Echvi_1396	0.65	-0.4
1,611,210	-		Echvi_1396	0.67	+1.6
1,611,224	-		Echvi_1396	0.68	-2.2
1,611,224	-		Echvi_1396	0.68	-1.8
1,611,224	-		Echvi_1396	0.68	+2.0
1,611,357	+		Echvi_1396	0.78	-0.5
1,611,358	-		Echvi_1396	0.78	+2.1
1,611,358	-		Echvi_1396	0.78	-0.4
1,611,375	+		Echvi_1396	0.80	+0.5
1,611,375	+		Echvi_1396	0.80	-0.7
1,611,375	+		Echvi_1396	0.80	-2.0
1,611,376	-		Echvi_1396	0.80	-1.0
1,611,376	-		Echvi_1396	0.80	-1.8
1,611,384	+		Echvi_1396	0.80	-1.3
1,611,384	+		Echvi_1396	0.80	+2.3
1,611,385	-		Echvi_1396	0.81	+0.6
1,611,417	+		Echvi_1396	0.83	-0.1
1,611,418	-		Echvi_1396	0.83	-0.3
1,611,480	+		Echvi_1396	0.88	+1.1
1,611,481	-		Echvi_1396	0.88	-1.9
1,611,481	-		Echvi_1396	0.88	-0.9
1,611,481	-		Echvi_1396	0.88	+1.4
1,611,481	-		Echvi_1396	0.88	+1.1
1,611,507	+				+1.0
1,611,508	-				+0.9
1,611,533	+				-1.9
1,611,545	+				+0.0
1,611,595	-				-1.3
1,611,618	+				-0.7
1,611,618	+				-2.7
1,611,618	+				-0.6
1,611,619	-				+3.3
1,611,619	-				-1.2
1,611,622	+				+1.5
1,611,622	+				-2.7
1,611,622	+				-0.1
1,611,623	-				-1.1
1,611,626	+				+0.1
1,611,626	+				-0.8
1,611,627	-				-2.3
1,611,635	-				+2.3
1,611,655	+				-1.3
1,611,655	+				-0.6
1,611,656	-				-0.3
1,611,656	-				-2.0
1,611,663	-				+2.5
1,611,764	+		Echvi_1397	0.19	+1.0
1,611,777	+		Echvi_1397	0.21	+2.3
1,611,778	-		Echvi_1397	0.21	-0.5
1,611,814	-		Echvi_1397	0.27	+0.1
1,611,886	+		Echvi_1397	0.37	+0.7
1,611,887	-		Echvi_1397	0.37	-0.5
1,611,887	-		Echvi_1397	0.37	-0.9
1,611,887	-		Echvi_1397	0.37	+0.5
1,611,893	-		Echvi_1397	0.38	+0.1
1,611,899	+		Echvi_1397	0.39	+1.1
1,611,913	+		Echvi_1397	0.41	+1.0
1,611,914	-		Echvi_1397	0.41	+1.5
1,611,914	-		Echvi_1397	0.41	+0.9
1,611,916	-		Echvi_1397	0.42	-2.7
1,612,114	-		Echvi_1397	0.71	+1.1
1,612,159	-		Echvi_1397	0.77	-2.7
1,612,162	-		Echvi_1397	0.78	-0.1
1,612,171	+		Echvi_1397	0.79	+3.5
1,612,181	+		Echvi_1397	0.80	-0.9
1,612,181	+		Echvi_1397	0.80	-0.1
1,612,185	+		Echvi_1397	0.81	+1.4
1,612,186	-		Echvi_1397	0.81	+1.1
1,612,186	-		Echvi_1397	0.81	+1.2
1,612,186	-		Echvi_1397	0.81	+0.7
1,612,198	-		Echvi_1397	0.83	+2.5
1,612,235	+		Echvi_1397	0.88	-1.7
1,612,240	-		Echvi_1397	0.89	+3.6
1,612,240	-		Echvi_1397	0.89	+0.7
1,612,303	+				-2.7
1,612,334	-				-1.1
1,612,372	+				+1.0
1,612,372	+				+1.2
1,612,373	-				-1.7
1,612,373	-				+0.5
1,612,375	+				-1.8
1,612,375	+				+0.5
1,612,376	-				-1.9
1,612,388	+				-0.9
1,612,389	-				-0.5
1,612,406	+				+1.5
1,612,406	+				-0.3
1,612,407	-				-1.5
1,612,469	+				+0.3
1,612,537	+				+2.3
1,612,548	+				+1.1
1,612,548	+				+0.7
1,612,559	-				-2.2
1,612,593	-				-0.3
1,612,615	-				+1.2
1,612,662	+				-0.5
1,612,663	-				+0.9
1,612,663	-				+2.6
1,612,663	-				-1.3
1,612,693	+				-1.6
1,612,693	+				-1.3
1,612,728	+				-0.3
1,612,735	-				-2.2
1,612,739	-				+0.7
1,612,936	+		Echvi_1398	0.16	-0.7
1,612,936	+		Echvi_1398	0.16	+1.9
1,612,936	+		Echvi_1398	0.16	-0.6
1,612,939	-		Echvi_1398	0.17	+1.2
1,612,939	-		Echvi_1398	0.17	+1.1
1,612,939	-		Echvi_1398	0.17	+0.9
1,612,939	-		Echvi_1398	0.17	-1.7
1,612,996	-		Echvi_1398	0.44	+0.8
1,613,098	-				-0.2
1,613,098	-				+0.1
1,613,098	-				+1.9
1,613,100	-				-1.6
1,613,135	-				-1.1
1,613,181	+				-0.1
1,613,198	+				-1.9
1,613,243	+				+2.0
1,613,301	-		Echvi_1399	0.11	-1.5
1,613,303	-		Echvi_1399	0.11	-2.3