Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1390

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,600,930	-		Echvi_1388	0.39	+0.5
1,600,930	-		Echvi_1388	0.39	+0.1
1,600,930	-		Echvi_1388	0.39	-0.1
1,600,970	-		Echvi_1388	0.48	-1.7
1,600,970	-		Echvi_1388	0.48	+1.6
1,600,970	-		Echvi_1388	0.48	-1.3
1,600,971	+		Echvi_1388	0.49	+0.9
1,600,972	-		Echvi_1388	0.49	-0.5
1,600,972	-		Echvi_1388	0.49	+1.0
1,601,051	-		Echvi_1388	0.68	+0.8
1,601,108	+		Echvi_1388	0.82	-1.0
1,601,109	-		Echvi_1388	0.83	+0.5
1,601,109	-		Echvi_1388	0.83	-1.4
1,601,137	+		Echvi_1388	0.90	-2.2
1,601,138	-				+1.2
1,601,138	-				-0.1
1,601,138	-				+0.1
1,601,161	-				-3.7
1,601,204	+				-2.0
1,601,210	+				-1.3
1,601,211	-				+1.5
1,601,214	+				+0.8
1,601,214	+				-0.8
1,601,214	+				-0.9
1,601,216	+				-0.9
1,601,216	+				+3.2
1,601,216	+				-2.2
1,601,217	-				+1.0
1,601,224	+				+2.3
1,601,224	+				-0.9
1,601,224	+				+0.4
1,601,224	+				+2.1
1,601,225	-				-1.0
1,601,239	-				-2.4
1,601,239	-				+0.0
1,601,256	-				+0.6
1,601,275	-				-1.3
1,601,283	-				-0.3
1,601,302	+				+0.1
1,601,306	+				+0.7
1,601,306	+				-0.3
1,601,306	+				-2.2
1,601,308	+				-0.7
1,601,322	+				+0.3
1,601,390	-				-0.3
1,601,394	-				-1.9
1,601,394	-				-0.7
1,601,485	+		Echvi_1389	0.19	-0.6
1,601,510	-		Echvi_1389	0.26	+1.8
1,601,513	+		Echvi_1389	0.26	-2.7
1,601,514	-		Echvi_1389	0.27	+0.9
1,601,514	-		Echvi_1389	0.27	-2.0
1,601,552	-		Echvi_1389	0.37	+1.1
1,601,552	-		Echvi_1389	0.37	-2.5
1,601,552	-		Echvi_1389	0.37	+0.1
1,601,552	-		Echvi_1389	0.37	-0.8
1,601,553	+		Echvi_1389	0.37	+1.2
1,601,670	-		Echvi_1389	0.68	-1.5
1,601,692	+		Echvi_1389	0.74	+0.5
1,601,692	+		Echvi_1389	0.74	-1.4
1,601,693	-		Echvi_1389	0.74	-0.7
1,601,693	-		Echvi_1389	0.74	+1.0
1,601,693	-		Echvi_1389	0.74	-1.6
1,601,701	+		Echvi_1389	0.77	-0.5
1,601,721	+		Echvi_1389	0.82	-3.1
1,601,804	+				+1.5
1,601,805	-				-1.1
1,601,821	+				-1.0
1,601,822	-				-2.2
1,601,851	+				-1.7
1,601,851	+				-1.1
1,601,851	+				-2.4
1,601,856	-				-0.7
1,601,881	+				+2.9
1,601,958	+		Echvi_1390	0.15	+1.4
1,601,959	-		Echvi_1390	0.16	+1.1
1,601,959	-		Echvi_1390	0.16	+1.3
1,601,965	-		Echvi_1390	0.17	+0.1
1,602,024	+		Echvi_1390	0.28	-2.2
1,602,024	+		Echvi_1390	0.28	-1.6
1,602,024	+		Echvi_1390	0.28	-1.3
1,602,024	+		Echvi_1390	0.28	-1.9
1,602,025	-		Echvi_1390	0.29	-2.4
1,602,025	-		Echvi_1390	0.29	+2.1
1,602,027	-		Echvi_1390	0.29	-1.5
1,602,027	-		Echvi_1390	0.29	-0.6
1,602,156	-		Echvi_1390	0.54	-1.0
1,602,157	+		Echvi_1390	0.55	-1.0
1,602,157	+		Echvi_1390	0.55	+0.4
1,602,157	+		Echvi_1390	0.55	+1.1
1,602,157	+		Echvi_1390	0.55	+0.3
1,602,157	+		Echvi_1390	0.55	-3.7
1,602,157	+		Echvi_1390	0.55	+0.7
1,602,157	+		Echvi_1390	0.55	-2.0
1,602,157	+		Echvi_1390	0.55	-2.2
1,602,157	+		Echvi_1390	0.55	-2.7
1,602,158	-		Echvi_1390	0.55	+2.6
1,602,158	-		Echvi_1390	0.55	-1.5
1,602,158	-		Echvi_1390	0.55	+0.7
1,602,158	-		Echvi_1390	0.55	+0.9
1,602,158	-		Echvi_1390	0.55	+0.1
1,602,158	-		Echvi_1390	0.55	-1.6
1,602,158	-		Echvi_1390	0.55	-1.9
1,602,158	-		Echvi_1390	0.55	-2.8
1,602,166	+		Echvi_1390	0.56	-1.9
1,602,166	+		Echvi_1390	0.56	+1.4
1,602,167	-		Echvi_1390	0.56	+1.3
1,602,167	-		Echvi_1390	0.56	-2.6
1,602,167	-		Echvi_1390	0.56	-0.1
1,602,280	-		Echvi_1390	0.79	+0.8
1,602,302	+		Echvi_1390	0.83	-2.2
1,602,302	+		Echvi_1390	0.83	-3.1
1,602,318	+		Echvi_1390	0.86	+2.1
1,602,318	+		Echvi_1390	0.86	-2.2
1,602,319	-		Echvi_1390	0.86	-2.2
1,602,339	+				-0.2
1,602,340	-				+1.7
1,602,388	-				+2.5
1,602,400	+				+0.3
1,602,579	+		Echvi_1391	0.16	+1.8
1,602,580	-		Echvi_1391	0.16	+1.4
1,602,580	-		Echvi_1391	0.16	+0.1
1,602,600	+		Echvi_1391	0.18	+1.0
1,602,600	+		Echvi_1391	0.18	-0.1
1,602,601	-		Echvi_1391	0.18	-0.5
1,602,601	-		Echvi_1391	0.18	-2.3
1,602,601	-		Echvi_1391	0.18	-0.6
1,602,601	-		Echvi_1391	0.18	-2.2
1,602,601	-		Echvi_1391	0.18	-0.1
1,602,602	+		Echvi_1391	0.18	+2.7
1,602,603	-		Echvi_1391	0.18	-0.0
1,602,603	-		Echvi_1391	0.18	+0.4
1,602,603	-		Echvi_1391	0.18	-0.5
1,602,633	+		Echvi_1391	0.21	+1.0
1,602,774	+		Echvi_1391	0.34	+1.1
1,602,775	-		Echvi_1391	0.34	-3.2
1,602,888	-		Echvi_1391	0.44	-0.1
1,602,917	+		Echvi_1391	0.47	+0.5
1,602,964	+		Echvi_1391	0.51	-1.6
1,602,964	+		Echvi_1391	0.51	+1.5
1,602,996	-		Echvi_1391	0.54	+2.5
1,602,997	+		Echvi_1391	0.54	+1.5
1,603,074	-		Echvi_1391	0.61	+0.7
1,603,118	+		Echvi_1391	0.65	-0.7
1,603,119	-		Echvi_1391	0.65	-2.2
1,603,149	+		Echvi_1391	0.68	+1.5
1,603,150	-		Echvi_1391	0.68	-1.0
1,603,171	+		Echvi_1391	0.70	-2.2
1,603,197	+		Echvi_1391	0.72	-2.1
1,603,197	+		Echvi_1391	0.72	-0.2
1,603,197	+		Echvi_1391	0.72	+0.4
1,603,229	+		Echvi_1391	0.75	-4.6
1,603,230	-		Echvi_1391	0.75	-1.1
1,603,257	+		Echvi_1391	0.78	-0.1
1,603,258	-		Echvi_1391	0.78	-1.6
1,603,258	-		Echvi_1391	0.78	+0.4
1,603,261	+		Echvi_1391	0.78	+4.5
1,603,261	+		Echvi_1391	0.78	+1.4
1,603,262	-		Echvi_1391	0.78	-0.5
1,603,262	-		Echvi_1391	0.78	+0.6