Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1353

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,559,742	-		Echvi_1352	0.67	-1.2
1,559,742	-		Echvi_1352	0.67	+1.5
1,559,742	-		Echvi_1352	0.67	+2.0
1,559,742	-		Echvi_1352	0.67	-0.1
1,559,742	-		Echvi_1352	0.67	-3.2
1,559,745	+		Echvi_1352	0.67	-1.1
1,559,745	+		Echvi_1352	0.67	-1.9
1,559,745	+		Echvi_1352	0.67	-2.5
1,559,745	+		Echvi_1352	0.67	-2.0
1,559,746	-		Echvi_1352	0.67	+0.6
1,559,746	-		Echvi_1352	0.67	+1.0
1,559,748	-		Echvi_1352	0.67	-1.2
1,559,748	-		Echvi_1352	0.67	+1.1
1,559,748	-		Echvi_1352	0.67	+3.4
1,559,753	+		Echvi_1352	0.67	+0.1
1,559,762	+		Echvi_1352	0.68	+1.4
1,559,787	+		Echvi_1352	0.69	-2.1
1,559,787	+		Echvi_1352	0.69	-0.8
1,559,787	+		Echvi_1352	0.69	+0.5
1,559,879	+		Echvi_1352	0.74	-0.7
1,559,880	-		Echvi_1352	0.74	-1.7
1,559,900	-		Echvi_1352	0.75	-0.5
1,559,914	-		Echvi_1352	0.76	-2.6
1,560,023	+		Echvi_1352	0.82	+1.6
1,560,024	-		Echvi_1352	0.82	-1.5
1,560,024	-		Echvi_1352	0.82	+1.3
1,560,026	-		Echvi_1352	0.82	+1.5
1,560,047	+		Echvi_1352	0.83	-1.5
1,560,168	-		Echvi_1352	0.90	-1.5
1,560,171	-		Echvi_1352	0.90	-1.2
1,560,171	-		Echvi_1352	0.90	+0.2
1,560,183	-				-0.9
1,560,218	+				+1.8
1,560,219	-				-0.5
1,560,255	-				-0.8
1,560,255	-				-2.2
1,560,255	-				-2.0
1,560,255	-				-1.6
1,560,258	+				+2.8
1,560,259	-				+0.9
1,560,263	+				+0.2
1,560,263	+				+1.6
1,560,264	-				-1.5
1,560,291	+				+0.4
1,560,310	-				-3.6
1,560,317	-				-1.5
1,560,323	-				+3.0
1,560,336	+				+0.1
1,560,337	-				-1.0
1,560,337	-				-0.7
1,560,434	+				+1.5
1,560,434	+				+0.8
1,560,470	+				-0.5
1,560,480	+				+2.2
1,560,480	+				-0.6
1,560,480	+				-0.8
1,560,480	+				+0.9
1,560,524	+				+1.3
1,560,529	+				-0.5
1,560,532	+				-1.3
1,560,532	+				+0.5
1,560,590	+				+0.9
1,560,590	+				-0.8
1,560,590	+				-0.1
1,560,590	+				-1.6
1,560,591	-				-1.4
1,560,612	+				-1.4
1,560,612	+				-2.2
1,560,612	+				+0.8
1,560,613	-				+1.8
1,560,631	+				+1.4
1,560,743	+				+2.0
1,560,823	+		Echvi_1353	0.11	-1.4
1,560,823	+		Echvi_1353	0.11	-2.1
1,560,824	-		Echvi_1353	0.11	-1.5
1,560,824	-		Echvi_1353	0.11	-1.0
1,560,824	-		Echvi_1353	0.11	-2.0
1,560,825	+		Echvi_1353	0.11	-2.3
1,560,826	-		Echvi_1353	0.11	-1.0
1,560,890	+		Echvi_1353	0.19	-0.1
1,560,891	-		Echvi_1353	0.20	-0.7
1,561,070	+		Echvi_1353	0.43	+3.4
1,561,278	+		Echvi_1353	0.71	-0.5
1,561,304	+		Echvi_1353	0.74	+1.1
1,561,304	+		Echvi_1353	0.74	+1.8
1,561,304	+		Echvi_1353	0.74	+2.5
1,561,305	-		Echvi_1353	0.74	+0.2
1,561,308	-		Echvi_1353	0.75	-1.6
1,561,347	-		Echvi_1353	0.80	-1.4
1,561,432	-				-1.0
1,561,457	+				-0.1
1,561,457	+				+0.3
1,561,458	-				+1.5
1,561,458	-				+1.1
1,561,474	+				-1.1
1,561,597	-		Echvi_1354	0.11	+0.8
1,561,597	-		Echvi_1354	0.11	-1.5
1,561,602	+		Echvi_1354	0.12	-0.1
1,561,602	+		Echvi_1354	0.12	+0.7
1,561,769	+		Echvi_1354	0.31	-0.3
1,561,836	+		Echvi_1354	0.39	+1.1
1,561,837	-		Echvi_1354	0.39	-0.7
1,561,853	-		Echvi_1354	0.41	+0.9
1,561,875	+		Echvi_1354	0.44	-0.5
1,562,066	-		Echvi_1354	0.67	-0.5
1,562,099	+		Echvi_1354	0.70	+0.2
1,562,100	-		Echvi_1354	0.71	-1.2
1,562,130	+		Echvi_1354	0.74	+3.1
1,562,130	+		Echvi_1354	0.74	+0.2
1,562,130	+		Echvi_1354	0.74	-1.7
1,562,139	+		Echvi_1354	0.75	+0.2
1,562,203	-		Echvi_1354	0.83	-1.2
1,562,223	+		Echvi_1354	0.85	-1.1
1,562,244	+		Echvi_1354	0.88	-2.5
1,562,245	-		Echvi_1354	0.88	+0.1
1,562,245	-		Echvi_1354	0.88	+1.0
1,562,245	-		Echvi_1354	0.88	-1.1
1,562,319	+				+0.2
1,562,320	-				+2.8
1,562,320	-				-1.2
1,562,332	-				-2.5
1,562,374	+				-1.0
1,562,374	+				+1.4