Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1309

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,504,753	+		Echvi_1307	0.88	+0.5
1,504,773	-		Echvi_1307	0.90	-0.8
1,504,774	+		Echvi_1307	0.90	-2.6
1,504,774	+		Echvi_1307	0.90	+0.5
1,504,774	+		Echvi_1307	0.90	+1.5
1,504,779	-		Echvi_1307	0.90	+1.5
1,504,784	-				-1.5
1,504,805	+				+2.4
1,504,805	+				+0.8
1,504,882	-				+1.5
1,504,890	+				+0.2
1,504,890	+				+2.5
1,504,890	+				-1.2
1,504,890	+				-0.1
1,504,890	+				-1.2
1,504,890	+				+0.8
1,504,891	-				-2.8
1,504,891	-				+0.3
1,504,891	-				-2.1
1,504,891	-				-2.4
1,504,891	-				+0.2
1,504,891	-				+0.6
1,504,896	+				+0.6
1,505,005	+				+1.5
1,505,044	+				+1.4
1,505,060	+				-2.0
1,505,111	-		Echvi_1308	0.28	-1.0
1,505,121	-		Echvi_1308	0.35	-1.7
1,505,123	-		Echvi_1308	0.36	-1.7
1,505,194	+		Echvi_1308	0.81	-3.0
1,505,194	+		Echvi_1308	0.81	-1.0
1,505,194	+		Echvi_1308	0.81	+0.6
1,505,196	+		Echvi_1308	0.83	+1.2
1,505,196	+		Echvi_1308	0.83	-1.5
1,505,247	+				+2.8
1,505,247	+				-1.5
1,505,283	-				-0.3
1,505,283	-				-0.7
1,505,295	-				-1.1
1,505,363	+				+2.5
1,505,363	+				-1.2
1,505,497	+				-1.5
1,505,533	-				+0.5
1,505,600	-				-0.0
1,505,605	-				-0.3
1,505,691	+				-3.0
1,505,692	-				-1.0
1,505,692	-				+2.0
1,505,692	-				-2.1
1,505,733	+				+1.5
1,505,770	+				-1.4
1,505,776	+				-2.7
1,505,776	+				+1.1
1,505,776	+				+2.4
1,505,788	+				+0.2
1,505,814	+				-2.3
1,505,815	-				+0.9
1,505,815	-				-2.1
1,505,815	-				+2.5
1,505,815	-				+2.4
1,505,840	-				+2.5
1,505,843	+				-1.9
1,505,843	+				+4.5
1,505,844	-				-1.7
1,505,844	-				-0.7
1,505,896	+				+4.8
1,505,896	+				-0.5
1,505,896	+				-0.1
1,505,897	-				-0.1
1,505,897	-				-0.1
1,505,910	+				-1.8
1,505,942	-				-1.1
1,505,999	-		Echvi_1309	0.10	+1.1
1,505,999	-		Echvi_1309	0.10	-1.4
1,506,137	+		Echvi_1309	0.15	-3.8
1,506,137	+		Echvi_1309	0.15	-1.8
1,506,167	+		Echvi_1309	0.16	-0.7
1,506,176	-		Echvi_1309	0.16	-3.2
1,506,176	-		Echvi_1309	0.16	-2.4
1,506,176	-		Echvi_1309	0.16	-0.3
1,506,202	+		Echvi_1309	0.17	-0.7
1,506,202	+		Echvi_1309	0.17	+2.6
1,506,203	-		Echvi_1309	0.17	-0.1
1,506,203	-		Echvi_1309	0.17	-1.5
1,506,203	-		Echvi_1309	0.17	-2.5
1,506,289	+		Echvi_1309	0.20	+1.5
1,506,289	+		Echvi_1309	0.20	+0.5
1,506,387	-		Echvi_1309	0.24	-0.7
1,506,387	-		Echvi_1309	0.24	-0.7
1,506,416	+		Echvi_1309	0.25	-0.7
1,506,528	+		Echvi_1309	0.29	+1.3
1,506,616	-		Echvi_1309	0.32	-1.1
1,506,655	-		Echvi_1309	0.34	-0.3
1,506,663	-		Echvi_1309	0.34	-1.4
1,506,676	+		Echvi_1309	0.34	-1.2
1,506,676	+		Echvi_1309	0.34	-2.3
1,506,676	+		Echvi_1309	0.34	-0.3
1,506,677	-		Echvi_1309	0.34	+2.0
1,506,677	-		Echvi_1309	0.34	+0.5
1,506,677	-		Echvi_1309	0.34	-0.8
1,506,746	+		Echvi_1309	0.37	+0.2
1,506,747	-		Echvi_1309	0.37	-1.5
1,506,752	+		Echvi_1309	0.37	-0.2
1,506,752	+		Echvi_1309	0.37	+0.2
1,506,753	-		Echvi_1309	0.37	+1.4
1,506,753	-		Echvi_1309	0.37	-0.8
1,506,753	-		Echvi_1309	0.37	-1.7
1,506,753	-		Echvi_1309	0.37	-3.4
1,506,779	+		Echvi_1309	0.38	+2.2
1,506,780	-		Echvi_1309	0.38	-1.2
1,506,786	+		Echvi_1309	0.38	-1.7
1,506,806	-		Echvi_1309	0.39	-1.4
1,506,867	+		Echvi_1309	0.41	+0.7
1,506,867	+		Echvi_1309	0.41	+0.7
1,506,868	-		Echvi_1309	0.41	+0.8
1,506,928	+		Echvi_1309	0.43	+0.9
1,507,108	-		Echvi_1309	0.50	-1.1
1,507,181	+		Echvi_1309	0.52	-2.2
1,507,181	+		Echvi_1309	0.52	+2.1
1,507,182	-		Echvi_1309	0.52	+0.1
1,507,222	+		Echvi_1309	0.54	-1.2
1,507,222	+		Echvi_1309	0.54	-1.3
1,507,272	-		Echvi_1309	0.56	-0.8
1,507,304	+		Echvi_1309	0.57	+1.5
1,507,374	+		Echvi_1309	0.59	+1.3
1,507,387	+		Echvi_1309	0.60	+0.2
1,507,387	+		Echvi_1309	0.60	-1.2
1,507,387	+		Echvi_1309	0.60	-1.1
1,507,388	-		Echvi_1309	0.60	-0.5
1,507,388	-		Echvi_1309	0.60	-2.1
1,507,390	+		Echvi_1309	0.60	-2.0
1,507,390	+		Echvi_1309	0.60	+1.5
1,507,391	-		Echvi_1309	0.60	-0.7
1,507,391	-		Echvi_1309	0.60	-0.7
1,507,517	+		Echvi_1309	0.64	-0.3
1,507,605	+		Echvi_1309	0.67	-1.0
1,507,606	-		Echvi_1309	0.67	+0.4
1,507,612	+		Echvi_1309	0.68	-1.4
1,507,612	+		Echvi_1309	0.68	-0.1
1,507,612	+		Echvi_1309	0.68	-1.0
1,507,613	-		Echvi_1309	0.68	-3.4
1,507,639	+		Echvi_1309	0.69	-0.1
1,507,639	+		Echvi_1309	0.69	+0.2
1,507,643	-		Echvi_1309	0.69	+0.3
1,507,643	-		Echvi_1309	0.69	-1.0
1,507,647	+		Echvi_1309	0.69	+1.3
1,507,699	-		Echvi_1309	0.71	+2.0
1,507,736	+		Echvi_1309	0.72	-2.3
1,507,736	+		Echvi_1309	0.72	-1.7
1,507,737	-		Echvi_1309	0.72	+1.1
1,507,737	-		Echvi_1309	0.72	+1.4
1,507,738	+		Echvi_1309	0.72	+2.8
1,507,738	+		Echvi_1309	0.72	+0.4
1,507,738	+		Echvi_1309	0.72	-2.0
1,507,739	-		Echvi_1309	0.72	+0.9
1,507,806	+		Echvi_1309	0.75	+1.6
1,507,807	-		Echvi_1309	0.75	-1.6
1,507,807	-		Echvi_1309	0.75	+0.9
1,507,815	-		Echvi_1309	0.75	-0.2
1,507,815	-		Echvi_1309	0.75	+2.6
1,507,815	-		Echvi_1309	0.75	+2.6
1,507,978	-		Echvi_1309	0.81	-1.0
1,507,978	-		Echvi_1309	0.81	-0.2
1,507,980	+		Echvi_1309	0.81	+0.8
1,507,991	+		Echvi_1309	0.81	+0.3
1,508,112	-		Echvi_1309	0.86	+1.0
1,508,112	-		Echvi_1309	0.86	-0.3
1,508,168	-		Echvi_1309	0.88	-1.5
1,508,203	+		Echvi_1309	0.89	-0.3
1,508,203	+		Echvi_1309	0.89	-0.5
1,508,204	-		Echvi_1309	0.89	-0.9
1,508,204	-		Echvi_1309	0.89	+0.2
1,508,204	-		Echvi_1309	0.89	-3.7
1,508,419	-				+1.8
1,508,419	-				-1.7
1,508,483	-				+3.9
1,508,518	-				+3.6
1,508,541	-				+1.4
1,508,545	-				+0.6
1,508,558	+				-2.2
1,508,558	+				-1.2
1,508,570	+				+1.6
1,508,590	+				-2.8
1,508,591	-				+2.2
1,508,591	-				+0.8
1,508,633	+				-2.5
1,508,636	-				+1.0
1,508,636	-				-0.6
1,508,636	-				-0.5
1,508,642	-				+1.7
1,508,642	-				-2.4
1,508,668	+				-0.5
1,508,668	+				-2.7
1,508,681	+				-2.2
1,508,689	-				-2.5
1,508,745	-				-0.5
1,508,777	+				+0.0
1,508,843	+				+0.4
1,508,843	+				-0.5
1,508,843	+				+1.6
1,508,843	+				+0.9
1,508,843	+				+0.7
1,508,843	+				+1.3
1,508,844	-				-0.5
1,508,844	-				+0.9
1,508,847	-				+0.6
1,508,910	+				+1.8
1,508,911	-				+1.5
1,508,921	-				-0.5
1,508,957	+		Echvi_1310	0.11	+1.9
1,508,978	+		Echvi_1310	0.12	+2.3
1,508,993	+		Echvi_1310	0.12	-2.4
1,509,018	+		Echvi_1310	0.13	+0.2
1,509,026	+		Echvi_1310	0.14	+0.5
1,509,026	+		Echvi_1310	0.14	-0.4
1,509,026	+		Echvi_1310	0.14	-0.2
1,509,026	+		Echvi_1310	0.14	-2.1
1,509,027	-		Echvi_1310	0.14	-0.1
1,509,027	-		Echvi_1310	0.14	-0.7
1,509,027	-		Echvi_1310	0.14	+0.9
1,509,027	-		Echvi_1310	0.14	+2.8
1,509,027	-		Echvi_1310	0.14	+1.2
1,509,027	-		Echvi_1310	0.14	+0.8
1,509,101	+		Echvi_1310	0.17	-1.0
1,509,101	+		Echvi_1310	0.17	+1.2
1,509,101	+		Echvi_1310	0.17	-2.4
1,509,102	-		Echvi_1310	0.17	-3.5
1,509,102	-		Echvi_1310	0.17	+1.6
1,509,102	-		Echvi_1310	0.17	+1.5
1,509,102	-		Echvi_1310	0.17	-0.3
1,509,116	-		Echvi_1310	0.17	+3.5
1,509,156	+				+0.9
1,509,158	+		Echvi_1310	0.19	-1.3
1,509,159	-		Echvi_1310	0.19	-3.1
1,509,159	-		Echvi_1310	0.19	-0.8
1,509,159	-		Echvi_1310	0.19	+0.2
1,509,198	+		Echvi_1310	0.21	-0.3
1,509,285	-		Echvi_1310	0.24	+0.2
1,509,302	+		Echvi_1310	0.25	+1.2
1,509,303	-		Echvi_1310	0.25	+0.7
1,509,321	-		Echvi_1310	0.26	-1.3
1,509,362	+		Echvi_1310	0.27	-0.4
1,509,434	+		Echvi_1310	0.30	-2.7
1,509,454	-		Echvi_1310	0.31	-0.8