Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1300

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,495,068	+		Echvi_1299	0.27	-1.2
1,495,068	+		Echvi_1299	0.27	+0.7
1,495,069	-		Echvi_1299	0.27	+1.0
1,495,069	-		Echvi_1299	0.27	+1.3
1,495,091	-		Echvi_1299	0.29	+1.8
1,495,130	+		Echvi_1299	0.32	-0.1
1,495,130	+		Echvi_1299	0.32	+1.4
1,495,191	+		Echvi_1299	0.38	+2.1
1,495,191	+		Echvi_1299	0.38	-0.3
1,495,191	+		Echvi_1299	0.38	-1.2
1,495,192	-		Echvi_1299	0.38	+1.9
1,495,192	-		Echvi_1299	0.38	-1.4
1,495,192	-		Echvi_1299	0.38	-1.9
1,495,192	-		Echvi_1299	0.38	-0.6
1,495,215	+		Echvi_1299	0.40	-1.9
1,495,216	-		Echvi_1299	0.40	-2.8
1,495,216	-		Echvi_1299	0.40	+0.0
1,495,250	+		Echvi_1299	0.43	-1.2
1,495,251	-		Echvi_1299	0.43	+0.2
1,495,251	-		Echvi_1299	0.43	-1.4
1,495,263	+		Echvi_1299	0.44	+1.9
1,495,264	-		Echvi_1299	0.44	+1.6
1,495,318	-		Echvi_1299	0.49	+1.2
1,495,338	+		Echvi_1299	0.51	+0.4
1,495,379	-		Echvi_1299	0.54	+0.8
1,495,379	-		Echvi_1299	0.54	-3.0
1,495,400	+		Echvi_1299	0.56	-1.3
1,495,400	+		Echvi_1299	0.56	-0.3
1,495,400	+		Echvi_1299	0.56	+0.5
1,495,400	+		Echvi_1299	0.56	-0.7
1,495,427	-		Echvi_1299	0.59	-1.1
1,495,427	-		Echvi_1299	0.59	+0.5
1,495,427	-		Echvi_1299	0.59	+1.4
1,495,431	+		Echvi_1299	0.59	-3.2
1,495,498	+		Echvi_1299	0.65	-0.5
1,495,498	+		Echvi_1299	0.65	-0.7
1,495,647	+		Echvi_1299	0.78	+2.3
1,495,647	+		Echvi_1299	0.78	-0.5
1,495,647	+		Echvi_1299	0.78	-0.8
1,495,647	+		Echvi_1299	0.78	+0.3
1,495,647	+		Echvi_1299	0.78	+0.9
1,495,647	+		Echvi_1299	0.78	-0.7
1,495,661	-		Echvi_1299	0.79	+0.9
1,495,684	+		Echvi_1299	0.81	-1.7
1,495,685	-		Echvi_1299	0.82	-3.0
1,495,711	+		Echvi_1299	0.84	+0.6
1,495,711	+		Echvi_1299	0.84	+0.9
1,495,711	+		Echvi_1299	0.84	+2.6
1,495,735	+		Echvi_1299	0.86	-0.9
1,495,735	+		Echvi_1299	0.86	-0.9
1,495,736	-		Echvi_1299	0.86	+0.8
1,495,736	-		Echvi_1299	0.86	-0.1
1,495,757	+		Echvi_1299	0.88	+0.9
1,495,758	-		Echvi_1299	0.88	-2.8
1,495,762	+		Echvi_1299	0.88	+0.1
1,495,763	-		Echvi_1299	0.89	-3.7
1,495,763	-		Echvi_1299	0.89	+2.8
1,495,819	+				-1.5
1,495,820	-				+0.5
1,495,867	+				-0.6
1,495,868	-				+0.0
1,495,868	-				-1.5
1,495,868	-				-1.2
1,495,868	-				-2.7
1,495,874	-				-0.9
1,495,874	-				+0.5
1,495,879	-				-1.9
1,495,930	+				-1.8
1,495,946	+				-0.9
1,495,961	-				-0.5
1,495,961	-				+3.3
1,495,961	-				+1.8
1,496,013	+				+1.5
1,496,013	+				-1.6
1,496,212	-		Echvi_1300	0.10	-0.8
1,496,212	-		Echvi_1300	0.10	-0.5
1,496,226	+		Echvi_1300	0.11	-1.4
1,496,228	+		Echvi_1300	0.11	-0.7
1,496,228	+		Echvi_1300	0.11	-1.7
1,496,228	+		Echvi_1300	0.11	-1.1
1,496,229	-		Echvi_1300	0.11	-1.5
1,496,375	+		Echvi_1300	0.20	+0.8
1,496,375	+		Echvi_1300	0.20	-2.1
1,496,375	+		Echvi_1300	0.20	-0.7
1,496,375	+		Echvi_1300	0.20	-2.1
1,496,375	+		Echvi_1300	0.20	-1.2
1,496,375	+		Echvi_1300	0.20	-1.3
1,496,376	-		Echvi_1300	0.20	-0.3
1,496,376	-		Echvi_1300	0.20	-3.5
1,496,376	-		Echvi_1300	0.20	-3.3
1,496,376	-		Echvi_1300	0.20	-0.2
1,496,376	-		Echvi_1300	0.20	-1.5
1,496,444	-		Echvi_1300	0.25	-2.6
1,496,531	+		Echvi_1300	0.30	-1.5
1,496,531	+		Echvi_1300	0.30	-0.3
1,496,532	-		Echvi_1300	0.30	-2.6
1,496,611	-		Echvi_1300	0.35	+0.5
1,496,673	-		Echvi_1300	0.39	-1.3
1,496,948	+		Echvi_1300	0.55	-3.2
1,496,949	-		Echvi_1300	0.55	-0.1
1,496,992	+		Echvi_1300	0.58	-0.3
1,496,993	-		Echvi_1300	0.58	-2.9
1,497,029	+		Echvi_1300	0.60	-0.8
1,497,029	+		Echvi_1300	0.60	-0.8
1,497,029	+		Echvi_1300	0.60	+0.5
1,497,030	-		Echvi_1300	0.60	-1.9
1,497,030	-		Echvi_1300	0.60	-1.8
1,497,030	-		Echvi_1300	0.60	-0.5
1,497,076	-		Echvi_1300	0.63	-1.4
1,497,105	+		Echvi_1300	0.65	+0.2
1,497,105	+		Echvi_1300	0.65	-1.5
1,497,211	-		Echvi_1300	0.72	-0.9
1,497,212	+		Echvi_1300	0.72	-1.4
1,497,212	+		Echvi_1300	0.72	-0.7
1,497,212	+		Echvi_1300	0.72	-2.0
1,497,212	+		Echvi_1300	0.72	-0.0
1,497,212	+		Echvi_1300	0.72	+0.2
1,497,212	+		Echvi_1300	0.72	-1.3
1,497,212	+		Echvi_1300	0.72	+0.4
1,497,213	-		Echvi_1300	0.72	-3.1
1,497,213	-		Echvi_1300	0.72	+0.5
1,497,213	-		Echvi_1300	0.72	+0.1
1,497,213	-		Echvi_1300	0.72	-0.3
1,497,282	+		Echvi_1300	0.76	-2.8
1,497,315	+		Echvi_1300	0.78	-1.9
1,497,316	-		Echvi_1300	0.78	-1.1
1,497,316	-		Echvi_1300	0.78	-3.1
1,497,433	+		Echvi_1300	0.85	-2.7
1,497,434	-		Echvi_1300	0.85	-0.7
1,497,520	+				+2.0
1,497,521	-				+0.8
1,497,521	-				+1.3
1,497,537	+				+0.3
1,497,537	+				-3.0
1,497,538	-				-1.2
1,497,538	-				+0.2
1,497,538	-				-0.8
1,497,538	-				-1.2
1,497,539	+				-2.5
1,497,540	-				-1.8
1,497,540	-				-1.4
1,497,540	-				-3.6
1,497,540	-				+0.5
1,497,658	-				-1.5
1,497,671	-				-1.3
1,497,676	-				-0.1
1,497,692	+				+0.0
1,497,692	+				-0.5
1,497,712	+				+1.2
1,497,714	+				-1.9
1,497,714	+				-0.8
1,497,720	+				-0.4
1,497,720	+				-2.6
1,497,720	+				-2.2
1,497,720	+				-2.3
1,497,720	+				+1.6
1,497,720	+				-1.6
1,497,762	+				-2.0
1,497,762	+				-1.2
1,497,763	-				-1.7
1,497,764	+				+2.7
1,497,764	+				-0.7
1,497,765	-				-0.5
1,497,765	-				-0.5
1,497,765	-				-1.2
1,497,765	-				+0.1
1,497,799	+				+1.0
1,497,799	+				-1.3
1,497,800	-				+0.2
1,497,801	+				+0.6
1,497,801	+				+1.1
1,497,801	+				-0.9
1,497,801	+				+0.2
1,497,802	-				+0.8
1,497,817	+				+2.7
1,497,818	-				-1.9
1,497,824	+				+3.5
1,497,878	+		Echvi_1301	0.17	+1.4
1,497,879	-		Echvi_1301	0.17	-1.7
1,497,908	+		Echvi_1301	0.21	-0.1
1,497,947	-		Echvi_1301	0.27	-1.3
1,497,949	-		Echvi_1301	0.27	-1.4
1,497,976	+		Echvi_1301	0.31	-1.6
1,497,976	+		Echvi_1301	0.31	-0.2
1,498,022	+		Echvi_1301	0.38	+0.2
1,498,072	+		Echvi_1301	0.45	-1.3
1,498,072	+		Echvi_1301	0.45	-1.8
1,498,073	-		Echvi_1301	0.45	+0.5
1,498,089	+		Echvi_1301	0.47	+1.6
1,498,089	+		Echvi_1301	0.47	-0.7
1,498,105	-		Echvi_1301	0.49	-1.9
1,498,153	+		Echvi_1301	0.56	+1.2
1,498,153	+		Echvi_1301	0.56	+2.0
1,498,153	+		Echvi_1301	0.56	-1.2
1,498,153	+		Echvi_1301	0.56	-0.7
1,498,154	-		Echvi_1301	0.56	-2.6
1,498,154	-		Echvi_1301	0.56	-0.8
1,498,265	-		Echvi_1301	0.72	-0.2
1,498,275	+		Echvi_1301	0.74	-1.8
1,498,276	-		Echvi_1301	0.74	+3.2
1,498,276	-		Echvi_1301	0.74	-1.2
1,498,316	-		Echvi_1301	0.80	+3.6
1,498,318	-		Echvi_1301	0.80	-1.9
1,498,360	-		Echvi_1301	0.86	+0.2
1,498,368	+		Echvi_1301	0.87	+0.2
1,498,404	+				+0.2
1,498,417	+				-1.4
1,498,418	-				-1.3
1,498,418	-				+1.6
1,498,418	-				-2.2
1,498,418	-				-0.1
1,498,418	-				-2.0
1,498,447	-				+0.9
1,498,467	+				-0.9
1,498,496	+				-0.7
1,498,496	+				+0.5
1,498,528	-		Echvi_1302	0.15	-2.3
1,498,560	+		Echvi_1302	0.24	-2.5
1,498,580	+		Echvi_1302	0.29	+2.4
1,498,622	-		Echvi_1302	0.40	+1.3