Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1235

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,418,507	-				+0.0
1,418,569	-				+1.7
1,418,629	+				-1.7
1,418,630	-				+0.5
1,418,630	-				+0.8
1,418,630	-				-3.2
1,418,650	+				+0.9
1,418,650	+				-2.6
1,418,651	-				+1.4
1,418,667	+				-1.4
1,418,671	-				+0.6
1,418,671	-				+0.1
1,418,671	-				+1.0
1,418,671	-				+2.3
1,418,676	+				+1.0
1,418,676	+				+1.6
1,418,677	-				+0.9
1,418,681	-				-3.3
1,418,685	+				-1.7
1,418,686	-				+3.3
1,418,745	+		Echvi_1234	0.15	-2.3
1,418,812	-		Echvi_1234	0.29	+0.2
1,418,942	+		Echvi_1234	0.57	-1.4
1,418,942	+		Echvi_1234	0.57	-2.2
1,418,943	-		Echvi_1234	0.57	-2.3
1,418,943	-		Echvi_1234	0.57	-2.0
1,418,943	-		Echvi_1234	0.57	-1.3
1,418,943	-		Echvi_1234	0.57	+1.2
1,419,019	+		Echvi_1234	0.74	+1.8
1,419,019	+		Echvi_1234	0.74	+0.5
1,419,019	+		Echvi_1234	0.74	-2.7
1,419,020	-		Echvi_1234	0.74	+1.2
1,419,021	+		Echvi_1234	0.74	-3.3
1,419,021	+		Echvi_1234	0.74	-2.7
1,419,021	+		Echvi_1234	0.74	-2.8
1,419,021	+		Echvi_1234	0.74	-1.4
1,419,021	+		Echvi_1234	0.74	+0.7
1,419,021	+		Echvi_1234	0.74	-3.1
1,419,021	+		Echvi_1234	0.74	-2.5
1,419,021	+		Echvi_1234	0.74	-1.9
1,419,022	-		Echvi_1234	0.74	-3.3
1,419,022	-		Echvi_1234	0.74	+0.6
1,419,022	-		Echvi_1234	0.74	+2.1
1,419,022	-		Echvi_1234	0.74	-3.8
1,419,080	+		Echvi_1234	0.87	-1.7
1,419,080	+		Echvi_1234	0.87	-3.4
1,419,093	+		Echvi_1234	0.89	-1.8
1,419,093	+		Echvi_1234	0.89	-1.1
1,419,093	+		Echvi_1234	0.89	-0.8
1,419,146	+				-2.3
1,419,180	+				-2.7
1,419,181	-				+3.7
1,419,181	-				+1.7
1,419,199	+				-1.4
1,419,211	+				-3.8
1,419,211	+				-1.1
1,419,212	-				+1.6
1,419,212	-				+1.2
1,419,259	-				+1.6
1,419,320	+				-0.1
1,419,321	-				+3.7
1,419,345	-				+1.8
1,419,396	+				+1.9
1,419,396	+				+2.3
1,419,396	+				+3.6
1,419,400	-				+3.9
1,419,400	-				+2.7
1,419,453	-		Echvi_1235	0.16	+3.1
1,419,586	+		Echvi_1235	0.38	+3.1
1,419,673	-		Echvi_1235	0.52	+3.1
1,419,704	+		Echvi_1235	0.57	+1.4
1,419,704	+		Echvi_1235	0.57	-0.3
1,419,705	-		Echvi_1235	0.57	+3.7
1,419,705	-		Echvi_1235	0.57	+1.9
1,419,705	-		Echvi_1235	0.57	+1.9
1,419,708	+		Echvi_1235	0.58	+2.3
1,419,708	+		Echvi_1235	0.58	+1.4
1,419,757	-		Echvi_1235	0.66	+1.9
1,419,760	+		Echvi_1235	0.66	+2.7
1,419,760	+		Echvi_1235	0.66	+2.6
1,419,761	-		Echvi_1235	0.67	+2.5
1,419,761	-		Echvi_1235	0.67	+3.1
1,419,761	-		Echvi_1235	0.67	+3.5
1,419,761	-		Echvi_1235	0.67	+3.1
1,419,793	+		Echvi_1235	0.72	+0.4
1,419,793	+		Echvi_1235	0.72	+1.7
1,419,794	-		Echvi_1235	0.72	+2.3
1,419,794	-		Echvi_1235	0.72	+1.1
1,419,814	-		Echvi_1235	0.75	+3.5
1,419,814	-		Echvi_1235	0.75	+2.6
1,419,961	+				-1.5
1,419,966	+				+1.9
1,419,967	-				+2.9
1,420,018	-				-1.3
1,420,093	-		Echvi_1236	0.31	+0.2
1,420,093	-		Echvi_1236	0.31	-3.8
1,420,144	+		Echvi_1236	0.51	+0.6
1,420,144	+		Echvi_1236	0.51	-0.7
1,420,159	+		Echvi_1236	0.57	+1.9
1,420,252	-				-1.7
1,420,271	+				-3.1
1,420,271	+				-1.2
1,420,272	-				-0.4
1,420,272	-				-0.1
1,420,298	-		Echvi_1237	0.15	-0.8
1,420,353	-		Echvi_1237	0.33	+0.2
1,420,362	-		Echvi_1237	0.36	-2.4
1,420,362	-		Echvi_1237	0.36	+0.1
1,420,428	+		Echvi_1237	0.57	-2.4
1,420,429	-		Echvi_1237	0.57	-2.1
1,420,463	+		Echvi_1237	0.68	+1.4
1,420,486	+		Echvi_1237	0.75	-1.2
1,420,487	-		Echvi_1237	0.75	-1.3
1,420,487	-		Echvi_1237	0.75	-1.4
1,420,494	+		Echvi_1237	0.77	-0.1
1,420,536	-				+0.2
1,420,551	-				-2.3
1,420,560	-				-1.3
1,420,560	-				-1.6
1,420,560	-				+0.2
1,420,560	-				-2.8
1,420,565	-				-2.3
1,420,609	+				-0.4
1,420,662	+				+0.5
1,420,662	+				+1.5
1,420,663	-				-1.0
1,420,663	-				+2.7
1,420,663	-				+0.4
1,420,666	+				-1.3
1,420,666	+				-1.1
1,420,666	+				-2.1
1,420,667	-				-0.2
1,420,668	+				-1.5
1,420,703	+				-2.5
1,420,704	-				-1.0
1,420,706	+				+2.3
1,420,707	-				-0.9
1,420,719	+				+3.2
1,420,723	-		Echvi_1238	0.11	+1.4