Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1228

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,407,546	-		Echvi_1226	0.66	-2.0
1,407,548	-		Echvi_1226	0.66	+0.0
1,407,548	-		Echvi_1226	0.66	+1.2
1,407,638	-		Echvi_1226	0.71	-0.3
1,407,666	+		Echvi_1226	0.73	+0.5
1,407,695	+		Echvi_1226	0.74	+0.0
1,407,695	+		Echvi_1226	0.74	-0.8
1,407,747	-		Echvi_1226	0.77	+0.5
1,407,803	+		Echvi_1226	0.80	-2.4
1,408,080	-				-1.4
1,408,080	-				+1.5
1,408,083	+				+1.1
1,408,083	+				-2.5
1,408,084	-				-0.1
1,408,089	+				+1.0
1,408,151	+				+0.9
1,408,151	+				+0.5
1,408,152	-				-0.5
1,408,152	-				-0.1
1,408,152	-				-0.5
1,408,157	-				+0.3
1,408,158	+				-2.2
1,408,159	-				+0.5
1,408,159	-				+0.2
1,408,186	-				-1.4
1,408,222	-				+1.3
1,408,378	-		Echvi_1227	0.51	+1.3
1,408,378	-		Echvi_1227	0.51	-0.9
1,408,477	+				+0.3
1,408,482	+				-2.7
1,408,499	+				-2.5
1,408,509	+				-0.2
1,408,509	+				-1.3
1,408,563	+				-2.2
1,408,564	-				+0.2
1,408,573	+				-0.8
1,408,573	+				+0.0
1,408,641	-		Echvi_1228	0.12	+0.3
1,408,641	-		Echvi_1228	0.12	-0.3
1,408,711	-		Echvi_1228	0.18	+0.8
1,408,894	+		Echvi_1228	0.35	+1.5
1,408,894	+		Echvi_1228	0.35	+0.9
1,408,895	-		Echvi_1228	0.35	+0.5
1,408,895	-		Echvi_1228	0.35	-1.5
1,408,923	+		Echvi_1228	0.38	-2.3
1,408,924	-		Echvi_1228	0.38	-2.1
1,408,924	-		Echvi_1228	0.38	-1.4
1,409,077	-		Echvi_1228	0.52	-0.4
1,409,091	-		Echvi_1228	0.53	-2.0
1,409,132	+		Echvi_1228	0.57	-0.1
1,409,218	-		Echvi_1228	0.65	-1.3
1,409,234	-		Echvi_1228	0.66	+2.0
1,409,266	-		Echvi_1228	0.69	-0.8
1,409,333	-		Echvi_1228	0.75	-2.4
1,409,333	-		Echvi_1228	0.75	-1.2
1,409,333	-		Echvi_1228	0.75	-2.1
1,409,476	+		Echvi_1228	0.88	+0.5
1,409,476	+		Echvi_1228	0.88	-1.5
1,409,477	-		Echvi_1228	0.89	+1.8
1,409,491	+		Echvi_1228	0.90	-2.1
1,409,567	+				-0.5
1,409,567	+				+0.3
1,409,568	-				-1.7
1,409,568	-				-2.0
1,409,599	+				+1.3
1,409,622	+				+1.3
1,409,634	+				-3.3
1,409,634	+				+1.2
1,409,647	+				-1.1
1,409,648	-				+0.5
1,409,648	-				+0.4
1,409,651	+				-1.9
1,409,652	-				+1.0
1,409,701	-				-2.3
1,409,701	-				+3.7
1,409,701	-				+1.9
1,409,711	-				-0.4
1,409,711	-				-0.3
1,409,711	-				-1.2
1,409,711	-				+1.0
1,409,711	-				-0.6
1,409,720	-				-1.0
1,409,782	-				-2.7
1,409,782	-				+0.5
1,409,815	-				+0.2
1,409,871	-				-0.7
1,409,916	+				-2.4
1,409,917	-				+0.7
1,409,959	-				-1.2
1,409,983	-				-0.6
1,409,985	-				+0.3
1,409,985	-				-0.2
1,409,985	-				+1.3
1,409,990	-				+1.6
1,410,047	+				-2.5
1,410,075	+				-1.7
1,410,075	+				-0.5
1,410,075	+				-0.7
1,410,076	-				-2.4
1,410,077	+				-0.3
1,410,089	+				-2.1
1,410,161	+				-0.7
1,410,162	-				-1.4
1,410,177	-				-1.0
1,410,179	+				-2.5
1,410,180	-				-0.8
1,410,180	-				-1.4
1,410,184	+				-2.4
1,410,190	-				+2.1
1,410,221	+				+1.8
1,410,222	-				-0.2
1,410,241	+				+1.0
1,410,241	+				-0.3
1,410,241	+				-2.8
1,410,241	+				-2.4
1,410,319	+		Echvi_1229	0.14	-0.5
1,410,320	-		Echvi_1229	0.14	-1.9
1,410,407	-		Echvi_1229	0.19	+0.3
1,410,410	+		Echvi_1229	0.19	+2.5
1,410,411	-		Echvi_1229	0.19	-0.1
1,410,411	-		Echvi_1229	0.19	-2.3
1,410,430	-		Echvi_1229	0.20	-2.8
1,410,495	+		Echvi_1229	0.24	-1.2
1,410,504	-		Echvi_1229	0.25	-2.7
1,410,522	+		Echvi_1229	0.26	-0.1
1,410,523	-		Echvi_1229	0.26	+0.3
1,410,530	-		Echvi_1229	0.26	-2.0
1,410,546	+		Echvi_1229	0.27	-1.6
1,410,547	-		Echvi_1229	0.27	-3.3
1,410,547	-		Echvi_1229	0.27	-1.9
1,410,547	-		Echvi_1229	0.27	-0.4
1,410,549	+		Echvi_1229	0.27	+2.5