Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1180

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,357,743	-				-0.3
1,357,743	-				+1.1
1,357,744	+				-1.5
1,357,745	-				-2.1
1,357,745	-				+0.7
1,357,914	-				-1.0
1,357,950	-				-1.0
1,357,950	-				-2.2
1,357,988	-				-3.2
1,358,024	-				-0.0
1,358,026	+				-1.4
1,358,027	-				+0.5
1,358,032	+				-1.5
1,358,127	+		Echvi_1180	0.23	-0.5
1,358,152	+		Echvi_1180	0.26	+0.2
1,358,152	+		Echvi_1180	0.26	-2.3
1,358,248	-		Echvi_1180	0.40	+1.0
1,358,325	+		Echvi_1180	0.51	-0.7
1,358,326	-		Echvi_1180	0.52	-1.8
1,358,326	-		Echvi_1180	0.52	-3.6
1,358,339	+		Echvi_1180	0.53	-1.8
1,358,339	+		Echvi_1180	0.53	+2.0
1,358,382	+		Echvi_1180	0.60	+1.3
1,358,393	-		Echvi_1180	0.61	+1.9
1,358,403	+		Echvi_1180	0.63	-3.8
1,358,414	-		Echvi_1180	0.64	-1.0
1,358,689	+				-1.9
1,358,690	-				-0.5
1,358,691	+				-0.1
1,358,691	+				-1.9
1,358,691	+				-1.1
1,358,691	+				-3.0
1,358,691	+				-1.6
1,358,691	+				-1.0
1,358,691	+				+0.8
1,358,691	+				-1.2
1,358,691	+				-3.0
1,358,692	-				+1.9
1,358,692	-				+1.0
1,358,692	-				+0.4
1,358,692	-				-1.1
1,358,692	-				+1.0
1,358,692	-				+3.1
1,358,692	-				+1.5
1,358,692	-				-2.2
1,358,692	-				+1.0
1,358,760	+				-1.2
1,358,761	-				+0.9
1,358,761	-				+2.2
1,358,761	-				-1.3
1,358,767	+				-1.6
1,358,767	+				-1.1
1,358,768	-				+0.1
1,358,792	-				+1.0
1,358,803	+				-2.2
1,358,803	+				-1.2
1,358,803	+				-1.5
1,358,804	-				+0.4
1,358,804	-				+1.6
1,358,820	-				+0.3
1,358,927	+		Echvi_1181	0.19	+1.3
1,358,927	+		Echvi_1181	0.19	+4.6
1,358,927	+		Echvi_1181	0.19	+0.2
1,358,928	-		Echvi_1181	0.19	+1.6
1,358,928	-		Echvi_1181	0.19	+3.7
1,358,928	-		Echvi_1181	0.19	+0.4
1,358,930	+		Echvi_1181	0.19	+3.3
1,358,931	-		Echvi_1181	0.20	-1.3
1,358,932	+		Echvi_1181	0.20	+0.5
1,358,932	+		Echvi_1181	0.20	-1.0
1,358,933	-		Echvi_1181	0.20	+0.1
1,358,978	+		Echvi_1181	0.27	+3.0
1,358,979	-		Echvi_1181	0.27	-0.1
1,358,979	-		Echvi_1181	0.27	-2.3
1,358,979	-		Echvi_1181	0.27	-2.0
1,358,979	-		Echvi_1181	0.27	-0.8
1,358,983	+		Echvi_1181	0.28	-1.0
1,358,983	+		Echvi_1181	0.28	-0.7
1,358,984	-		Echvi_1181	0.28	+1.5
1,359,011	+		Echvi_1181	0.32	-2.9
1,359,012	-		Echvi_1181	0.32	+0.8
1,359,012	-		Echvi_1181	0.32	+0.5
1,359,025	-		Echvi_1181	0.34	+1.5
1,359,065	+		Echvi_1181	0.41	-0.2
1,359,065	+		Echvi_1181	0.41	-0.3
1,359,065	+		Echvi_1181	0.41	-2.6
1,359,066	-		Echvi_1181	0.41	-3.3
1,359,073	+		Echvi_1181	0.42	+1.4
1,359,151	-		Echvi_1181	0.54	+3.2
1,359,152	+		Echvi_1181	0.55	-1.5
1,359,152	+		Echvi_1181	0.55	+0.9
1,359,152	+		Echvi_1181	0.55	+0.5
1,359,153	-		Echvi_1181	0.55	-0.0
1,359,196	-		Echvi_1181	0.61	+1.2
1,359,209	+		Echvi_1181	0.64	+1.2
1,359,209	+		Echvi_1181	0.64	+2.2
1,359,210	-		Echvi_1181	0.64	+0.7
1,359,210	-		Echvi_1181	0.64	-0.1
1,359,210	-		Echvi_1181	0.64	+3.6
1,359,211	+		Echvi_1181	0.64	-1.8
1,359,211	+		Echvi_1181	0.64	+0.3
1,359,308	+		Echvi_1181	0.79	+1.5
1,359,434	-				+1.5
1,359,476	+				+2.9
1,359,476	+				-1.4
1,359,476	+				-1.1
1,359,482	+				+1.1
1,359,483	-				+1.7
1,359,485	-				-1.9
1,359,508	-				+1.6
1,359,527	+				-0.4
1,359,544	+				+0.9
1,359,544	+				+3.8
1,359,544	+				+0.8
1,359,545	-				+4.0
1,359,545	-				+1.8
1,359,557	-				-0.3
1,359,585	+				+0.5
1,359,591	+				-1.9
1,359,592	-				+1.5
1,359,621	+				-0.9
1,359,621	+				-0.5
1,359,622	-				-1.1
1,359,628	+				-0.5
1,359,630	+				+0.3