Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1078

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,240,217	-		Echvi_1077	0.56	-3.1
1,240,285	-		Echvi_1077	0.63	-1.3
1,240,309	+		Echvi_1077	0.65	-2.9
1,240,309	+		Echvi_1077	0.65	+0.2
1,240,310	-		Echvi_1077	0.65	-0.1
1,240,320	+		Echvi_1077	0.66	-0.1
1,240,320	+		Echvi_1077	0.66	-0.2
1,240,321	-		Echvi_1077	0.66	-1.6
1,240,389	+		Echvi_1077	0.73	-0.3
1,240,389	+		Echvi_1077	0.73	-0.7
1,240,389	+		Echvi_1077	0.73	-0.8
1,240,389	+		Echvi_1077	0.73	-2.3
1,240,390	-		Echvi_1077	0.73	-0.1
1,240,390	-		Echvi_1077	0.73	-0.1
1,240,391	+		Echvi_1077	0.73	+0.4
1,240,498	-		Echvi_1077	0.84	-1.1
1,240,498	-		Echvi_1077	0.84	+0.9
1,240,534	-		Echvi_1077	0.88	+0.0
1,240,661	+				+2.0
1,240,672	+				-0.1
1,240,672	+				-0.7
1,240,672	+				-3.8
1,240,673	-				+1.5
1,240,673	-				+0.4
1,240,694	-				-1.7
1,240,700	+				-1.7
1,240,704	+				-2.7
1,240,704	+				-1.5
1,240,704	+				-0.4
1,240,704	+				-0.7
1,240,705	-				-0.7
1,240,705	-				-0.4
1,240,706	+				-1.2
1,240,706	+				-2.7
1,240,707	-				-2.0
1,240,707	-				-1.0
1,240,707	-				-0.1
1,240,707	-				+2.0
1,240,709	+				+0.3
1,240,710	-				-3.8
1,240,730	+				+1.0
1,240,766	-				+0.5
1,240,775	-				-0.1
1,240,775	-				+2.7
1,240,775	-				+1.4
1,240,957	+				-0.8
1,240,980	+				+1.2
1,241,025	-				+1.2
1,241,045	-				-0.8
1,241,101	+				+1.5
1,241,101	+				-2.4
1,241,104	+				+0.2
1,241,104	+				-1.6
1,241,107	+				-2.6
1,241,132	-				+0.7
1,241,170	+				+1.2
1,241,176	+				+1.5
1,241,185	-				+0.3
1,241,214	+				+0.6
1,241,504	-		Echvi_1078	0.48	-1.0
1,241,509	+		Echvi_1078	0.49	-0.5
1,241,509	+		Echvi_1078	0.49	-2.3
1,241,510	-		Echvi_1078	0.49	-2.1
1,241,575	+		Echvi_1078	0.59	-0.7
1,241,612	+		Echvi_1078	0.64	-1.4
1,241,682	-		Echvi_1078	0.75	+1.8
1,241,696	-		Echvi_1078	0.77	-2.9
1,241,727	+		Echvi_1078	0.81	-1.1
1,241,903	+				+1.1
1,241,903	+				-3.7
1,241,903	+				-2.5
1,241,904	-				+0.4
1,241,904	-				+2.5
1,241,939	+				-1.7
1,242,136	+				+0.2
1,242,137	-				+0.4
1,242,143	+				+0.6
1,242,143	+				-1.8
1,242,144	-				+0.5
1,242,174	-				+2.3
1,242,184	+				-1.0
1,242,185	-				-0.7
1,242,215	+				+1.1
1,242,216	-				-1.7
1,242,216	-				-0.8
1,242,247	+				+0.5
1,242,264	-				-2.0
1,242,267	-				-1.3
1,242,283	+				+1.0
1,242,336	+				-3.0
1,242,363	-				-4.0
1,242,491	-				-1.5
1,242,509	+				+1.8
1,242,510	-				-0.0
1,242,513	-				+0.6
1,242,513	-				+0.5
1,242,513	-				+2.0
1,242,515	-				-1.3
1,242,595	+		Echvi_1080	0.25	+3.0
1,242,596	-		Echvi_1080	0.26	+1.0
1,242,610	+		Echvi_1080	0.30	-2.6
1,242,619	+		Echvi_1080	0.32	-1.1
1,242,619	+		Echvi_1080	0.32	+0.3
1,242,619	+		Echvi_1080	0.32	+0.2
1,242,656	+		Echvi_1080	0.44	+3.9
1,242,736	+		Echvi_1080	0.68	+1.7
1,242,818	-				-1.5
1,242,818	-				+0.5