Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1010

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,169,928	+				+0.2
1,169,928	+				+0.1
1,169,946	+				-2.2
1,169,947	-				-2.1
1,169,956	+				+0.3
1,169,956	+				-1.7
1,169,957	-				-1.2
1,169,971	+				-1.7
1,169,972	-				+1.2
1,169,993	+				+1.4
1,169,993	+				-2.2
1,169,993	+				-0.8
1,169,993	+				+1.5
1,169,993	+				+0.5
1,169,993	+				+0.4
1,169,993	+				+0.8
1,169,994	-				+1.5
1,169,994	-				-0.9
1,169,994	-				+1.7
1,169,994	-				-0.5
1,169,994	-				+2.5
1,169,994	-				-1.9
1,169,994	-				-0.1
1,169,994	-				+0.1
1,169,994	-				+2.3
1,169,994	-				-1.2
1,169,994	-				-1.6
1,169,994	-				-0.6
1,169,994	-				+1.5
1,169,995	+				-2.1
1,169,995	+				-2.2
1,169,996	-				+1.2
1,169,996	-				+0.5
1,170,007	+				-4.6
1,170,007	+				-2.7
1,170,017	+				-0.8
1,170,024	+				-1.3
1,170,024	+				-1.9
1,170,024	+				+0.3
1,170,025	-				-1.5
1,170,026	+				-0.6
1,170,026	+				+0.2
1,170,026	+				+0.9
1,170,027	-				-0.6
1,170,027	-				+0.5
1,170,027	-				-0.1
1,170,027	-				+1.5
1,170,027	-				-2.3
1,170,045	+				-2.0
1,170,045	+				-0.5
1,170,101	-				-0.9
1,170,106	+				-0.2
1,170,106	+				-1.7
1,170,107	-				+0.8
1,170,107	-				+0.5
1,170,107	-				+3.0
1,170,113	+				-2.0
1,170,113	+				+0.8
1,170,129	+				-0.8
1,170,129	+				-2.1
1,170,130	-				-1.5
1,170,130	-				+2.0
1,170,132	-				-1.7
1,170,143	+				+0.2
1,170,143	+				+0.7
1,170,143	+				-0.1
1,170,143	+				-1.8
1,170,143	+				-0.3
1,170,143	+				+0.8
1,170,143	+				+0.5
1,170,144	-				+1.2
1,170,144	-				-1.8
1,170,174	+				-2.5
1,170,174	+				+0.3
1,170,175	-				-0.6
1,170,175	-				+1.2
1,170,186	+				-0.8
1,170,187	-				-0.1
1,170,237	+				+0.0
1,170,237	+				+0.2
1,170,238	-				-0.8
1,170,260	+				-0.1
1,170,301	-				+0.2
1,170,437	-		Echvi_1009	0.30	+0.2
1,170,485	-		Echvi_1009	0.37	+0.5
1,170,500	+		Echvi_1009	0.39	+0.9
1,170,517	+		Echvi_1009	0.42	-1.5
1,170,609	-		Echvi_1009	0.56	+0.9
1,170,629	+		Echvi_1009	0.59	-1.1
1,170,629	+				+3.5
1,170,629	+		Echvi_1009	0.59	-1.9
1,170,629	+		Echvi_1009	0.59	-0.6
1,170,630	-		Echvi_1009	0.59	-0.5
1,170,630	-		Echvi_1009	0.59	-2.7
1,170,630	-		Echvi_1009	0.59	-3.2
1,170,630	-		Echvi_1009	0.59	-2.5
1,170,630	-				+0.9
1,170,630	-		Echvi_1009	0.59	+1.1
1,170,630	-		Echvi_1009	0.59	-0.3
1,170,630	-		Echvi_1009	0.59	+1.3
1,170,671	-		Echvi_1009	0.65	+0.4
1,170,678	+		Echvi_1009	0.66	-1.3
1,170,744	+		Echvi_1009	0.76	+0.9
1,170,744	+		Echvi_1009	0.76	+1.4
1,170,874	+				+1.4
1,170,887	+				-1.4
1,170,887	+				-1.8
1,170,887	+				-0.0
1,170,887	+				-0.1
1,170,888	-				-1.0
1,170,888	-				+1.2
1,170,901	+				-3.3
1,170,901	+				-1.7
1,170,981	+				+0.2
1,171,054	-		Echvi_1010	0.20	-2.7
1,171,062	+		Echvi_1010	0.21	+0.3
1,171,145	-		Echvi_1010	0.32	-1.6
1,171,237	-		Echvi_1010	0.45	+1.5
1,171,366	+		Echvi_1010	0.62	+1.7
1,171,366	+		Echvi_1010	0.62	-0.1
1,171,366	+		Echvi_1010	0.62	-1.4
1,171,366	+		Echvi_1010	0.62	-1.9
1,171,366	+		Echvi_1010	0.62	-0.9
1,171,366	+		Echvi_1010	0.62	-3.5
1,171,367	-		Echvi_1010	0.62	-1.5
1,171,367	-		Echvi_1010	0.62	-1.3
1,171,367	-		Echvi_1010	0.62	+0.9
1,171,367	-		Echvi_1010	0.62	-2.6
1,171,367	-		Echvi_1010	0.62	-1.8
1,171,368	+		Echvi_1010	0.62	+0.9
1,171,368	+		Echvi_1010	0.62	-1.3
1,171,369	-		Echvi_1010	0.63	+0.1
1,171,369	-		Echvi_1010	0.63	+0.6
1,171,378	+		Echvi_1010	0.64	-1.2
1,171,378	+		Echvi_1010	0.64	-1.8
1,171,378	+		Echvi_1010	0.64	-0.0
1,171,379	-		Echvi_1010	0.64	-1.7
1,171,379	-		Echvi_1010	0.64	-2.6
1,171,430	-		Echvi_1010	0.71	-0.1
1,171,442	-		Echvi_1010	0.73	-0.0
1,171,443	+		Echvi_1010	0.73	+0.8
1,171,443	+		Echvi_1010	0.73	+1.2
1,171,447	+		Echvi_1010	0.73	-0.4
1,171,508	+		Echvi_1010	0.82	-1.4
1,171,570	+				-0.8
1,171,571	-				-0.5
1,171,593	+				+1.5
1,171,594	-				+1.5
1,171,607	+				-0.9
1,171,607	+				+2.0
1,171,611	+				-2.4
1,171,611	+				-1.8
1,171,612	-				+0.1
1,171,612	-				-0.1
1,171,615	+				-0.7
1,171,615	+				-0.9
1,171,616	-				+1.5
1,171,619	+				-4.0
1,171,619	+				+1.0
1,171,619	+				-2.6
1,171,642	+				+2.6
1,171,757	-				-1.1
1,171,784	+				+2.1
1,171,785	-				-0.3
1,171,785	-				+1.8
1,171,799	+				+1.6
1,171,799	+				+0.9
1,171,799	+				-1.7
1,171,800	-				-1.6
1,171,800	-				+1.2
1,171,800	-				+0.9
1,171,819	+				-0.8
1,171,819	+				-0.4
1,171,819	+				+1.5
1,171,820	-				+2.1
1,171,820	-				-0.9
1,171,824	+				+0.8
1,171,843	-				-1.3
1,171,843	-				-3.0
1,171,860	-				+0.3
1,171,873	+				+1.4
1,171,873	+				+0.4
1,171,874	-				+0.2
1,171,874	-				-0.4
1,171,874	-				-1.3
1,171,874	-				+2.8
1,171,945	+		Echvi_1011	0.13	-1.7
1,171,946	-		Echvi_1011	0.13	-0.2
1,171,955	+		Echvi_1011	0.13	+2.6
1,171,958	-		Echvi_1011	0.13	+0.2
1,171,971	+		Echvi_1011	0.14	-0.1
1,172,095	+		Echvi_1011	0.23	+0.3
1,172,282	-		Echvi_1011	0.35	-1.7
1,172,502	+		Echvi_1011	0.50	+2.0
1,172,502	+		Echvi_1011	0.50	+1.8
1,172,512	+		Echvi_1011	0.50	+1.2
1,172,512	+		Echvi_1011	0.50	-2.0
1,172,512	+		Echvi_1011	0.50	-1.4
1,172,512	+		Echvi_1011	0.50	+1.1
1,172,512	+		Echvi_1011	0.50	+0.7
1,172,513	-		Echvi_1011	0.50	-2.1
1,172,513	-		Echvi_1011	0.50	+1.1
1,172,513	-		Echvi_1011	0.50	-2.4
1,172,513	-		Echvi_1011	0.50	-0.3
1,172,513	-		Echvi_1011	0.50	-1.3
1,172,513	-		Echvi_1011	0.50	-2.3
1,172,513	-		Echvi_1011	0.50	+1.6
1,172,514	+		Echvi_1011	0.50	-3.7
1,172,515	-		Echvi_1011	0.50	-2.2
1,172,524	+		Echvi_1011	0.51	+3.2
1,172,524	+		Echvi_1011	0.51	-0.3