Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1005

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,164,827	+		Echvi_1004	0.79	+1.5
1,164,843	-		Echvi_1004	0.80	+0.6
1,164,890	+		Echvi_1004	0.82	+0.2
1,164,891	-		Echvi_1004	0.82	-0.1
1,164,897	-		Echvi_1004	0.82	-2.1
1,164,938	+		Echvi_1004	0.84	-2.1
1,164,939	-		Echvi_1004	0.84	-0.2
1,164,965	+		Echvi_1004	0.85	+0.9
1,165,068	+		Echvi_1004	0.89	-2.1
1,165,068	+		Echvi_1004	0.89	-0.1
1,165,068	+		Echvi_1004	0.89	+0.9
1,165,068	+		Echvi_1004	0.89	+2.3
1,165,068	+		Echvi_1004	0.89	+1.2
1,165,069	-		Echvi_1004	0.89	-2.9
1,165,069	-		Echvi_1004	0.89	-1.8
1,165,069	-		Echvi_1004	0.89	-1.5
1,165,069	-		Echvi_1004	0.89	+3.3
1,165,069	-		Echvi_1004	0.89	+0.5
1,165,077	+		Echvi_1004	0.90	+0.2
1,165,077	+		Echvi_1004	0.90	-0.0
1,165,077	+		Echvi_1004	0.90	-1.8
1,165,077	+		Echvi_1004	0.90	+0.2
1,165,078	-		Echvi_1004	0.90	-2.4
1,165,091	-				-1.8
1,165,099	+				-0.6
1,165,100	-				+2.1
1,165,118	-				+1.2
1,165,118	-				-0.1
1,165,145	+				-0.1
1,165,146	-				-1.7
1,165,152	-				+1.2
1,165,152	-				-1.9
1,165,250	+				-1.4
1,165,268	+				+1.1
1,165,269	-				-0.0
1,165,334	-				-0.1
1,165,343	-				-1.3
1,165,374	+				+0.1
1,165,400	-				+0.6
1,165,446	+				-1.4
1,165,446	+				-1.0
1,165,446	+				-1.8
1,165,447	-				+0.5
1,165,447	-				+1.1
1,165,449	+				-1.1
1,165,449	+				-1.2
1,165,449	+				+0.2
1,165,449	+				+0.3
1,165,449	+				-1.6
1,165,450	-				-1.7
1,165,487	+				+0.7
1,165,514	+				+0.9
1,165,546	+				+0.9
1,165,547	-				+2.5
1,165,547	-				+0.4
1,165,547	-				+0.0
1,165,558	+				-2.5
1,165,558	+				-1.6
1,165,558	+				-1.8
1,165,558	+				+2.3
1,165,559	-				-1.1
1,165,654	+				+0.4
1,165,654	+				-2.3
1,165,655	-				+1.7
1,165,655	-				+1.1
1,165,657	+				-1.2
1,165,658	-				-0.3
1,165,662	+				+1.1
1,165,662	+				-0.5
1,165,662	+				-0.0
1,165,663	-				+2.5
1,165,663	-				-3.5
1,165,685	+				+2.5
1,165,686	-				-0.1
1,165,692	+				-2.3
1,165,701	+				+3.6
1,165,702	-				+0.7
1,165,702	-				-2.5
1,165,711	+				+1.3
1,165,713	+				+0.5
1,165,723	-				+1.9
1,165,723	-				+1.3
1,165,733	+				-1.2
1,165,736	+				+1.1
1,165,790	+				+0.9
1,165,790	+				-3.5
1,165,791	-				+2.2
1,165,791	-				-2.4
1,165,791	-				-1.7
1,165,795	-				-3.2
1,165,799	+				-1.1
1,165,800	-				-2.1
1,165,811	+				-0.9
1,165,811	+				-0.3
1,165,812	-				-2.5
1,165,823	+				+0.5
1,165,830	+				-0.9
1,165,830	+				-0.9
1,165,830	+				+1.3
1,165,831	-				-2.1
1,165,991	-		Echvi_1005	0.24	-2.3
1,166,001	-		Echvi_1005	0.25	-0.3
1,166,001	-		Echvi_1005	0.25	+3.4
1,166,007	-		Echvi_1005	0.26	+1.8
1,166,062	-		Echvi_1005	0.33	-0.5
1,166,135	+		Echvi_1005	0.42	-0.6
1,166,135	+		Echvi_1005	0.42	+1.8
1,166,135	+				+1.5
1,166,136	-		Echvi_1005	0.42	+2.4
1,166,136	-		Echvi_1005	0.42	-1.5
1,166,152	+		Echvi_1005	0.44	-1.0
1,166,152	+		Echvi_1005	0.44	-2.2
1,166,153	-		Echvi_1005	0.44	-0.1
1,166,153	-		Echvi_1005	0.44	-1.8
1,166,153	-		Echvi_1005	0.44	+0.4
1,166,153	-		Echvi_1005	0.44	-2.8
1,166,153	-		Echvi_1005	0.44	-2.0
1,166,173	-		Echvi_1005	0.47	-0.1
1,166,206	+		Echvi_1005	0.51	-1.7
1,166,207	-		Echvi_1005	0.51	+0.2
1,166,209	-		Echvi_1005	0.51	-1.6
1,166,209	-		Echvi_1005	0.51	-1.5
1,166,209	-		Echvi_1005	0.51	-1.6
1,166,259	+		Echvi_1005	0.57	-0.1
1,166,259	+		Echvi_1005	0.57	-2.5
1,166,260	-		Echvi_1005	0.57	-1.4
1,166,260	-		Echvi_1005	0.57	-3.5
1,166,260	-		Echvi_1005	0.57	-0.3
1,166,341	+		Echvi_1005	0.67	+0.6
1,166,342	-		Echvi_1005	0.68	-2.2
1,166,377	-		Echvi_1005	0.72	-1.2
1,166,377	-		Echvi_1005	0.72	-0.9
1,166,397	+		Echvi_1005	0.74	-2.9
1,166,415	+		Echvi_1005	0.77	+0.9
1,166,415	+		Echvi_1005	0.77	+2.5
1,166,419	+		Echvi_1005	0.77	+1.0
1,166,420	-		Echvi_1005	0.77	-3.0
1,166,431	-		Echvi_1005	0.79	+1.5
1,166,431	-		Echvi_1005	0.79	+1.5
1,166,431	-		Echvi_1005	0.79	-3.1
1,166,431	-		Echvi_1005	0.79	-0.6
1,166,518	+		Echvi_1005	0.89	-0.1
1,166,518	+		Echvi_1005	0.89	-1.5
1,166,519	-		Echvi_1005	0.89	+0.2
1,166,519	-		Echvi_1005	0.89	+1.1
1,166,529	-				-2.2
1,166,590	-				+0.2
1,166,590	-				-1.7
1,166,603	-				-1.1
1,166,613	-				-1.2
1,166,644	-				+2.2
1,166,707	-				-3.1
1,166,707	-				-0.6
1,166,707	-				-0.8
1,166,739	+				-1.4
1,166,771	+				+0.4
1,166,776	+				+1.5
1,166,777	-				-1.1
1,166,792	+				-0.3
1,166,792	+				+3.7
1,166,793	-				-3.2
1,166,841	-				+1.4
1,166,851	-				-0.9
1,166,883	+				-0.1
1,166,883	+				-1.1
1,166,901	+		Echvi_1006	0.19	+0.4
1,166,911	+		Echvi_1006	0.24	+1.2
1,166,940	+		Echvi_1006	0.39	-1.2
1,166,983	+		Echvi_1006	0.61	-1.6
1,166,983	+		Echvi_1006	0.61	-2.8
1,166,983	+		Echvi_1006	0.61	+1.4
1,166,989	+		Echvi_1006	0.65	+1.0
1,166,989	+		Echvi_1006	0.65	+1.4
1,166,989	+		Echvi_1006	0.65	+0.6
1,166,989	+		Echvi_1006	0.65	+1.5
1,166,989	+		Echvi_1006	0.65	+4.7
1,166,989	+		Echvi_1006	0.65	-0.3
1,166,990	-		Echvi_1006	0.65	-2.6
1,166,990	-		Echvi_1006	0.65	-1.9
1,166,990	-		Echvi_1006	0.65	+1.3
1,166,990	-		Echvi_1006	0.65	+0.5
1,166,990	-		Echvi_1006	0.65	-0.1
1,166,992	+		Echvi_1006	0.66	-2.5
1,166,992	+		Echvi_1006	0.66	-1.1
1,166,992	+		Echvi_1006	0.66	+2.9
1,167,005	-		Echvi_1006	0.73	-0.6
1,167,051	-				+1.5
1,167,111	+				-0.9
1,167,135	-				-3.7
1,167,193	+				-1.8
1,167,197	-				-0.0
1,167,220	+				+0.7
1,167,220	+				-2.0
1,167,220	+				-0.5
1,167,221	-				+0.0
1,167,221	-				+1.1
1,167,241	+				+3.3
1,167,241	+				-1.9
1,167,242	-				-0.6
1,167,242	-				+1.1
1,167,243	+				+0.0
1,167,243	+				+2.6
1,167,243	+				-0.6
1,167,243	+				+0.9
1,167,243	+				+1.1
1,167,243	+				+1.0
1,167,244	-				-1.6
1,167,244	-				-2.0
1,167,244	-				-0.9
1,167,244	-				-2.1
1,167,244	-				+0.0
1,167,246	+				-0.4
1,167,246	+				+0.1
1,167,246	+				-1.6
1,167,246	+				+2.5
1,167,246	+				-0.5
1,167,246	+				+0.6
1,167,247	-				-2.8
1,167,247	-				+1.2
1,167,253	+				-2.1
1,167,264	-				+1.9
1,167,264	-				+0.9
1,167,264	-				+1.0
1,167,285	+				+0.8
1,167,286	-				-2.6
1,167,286	-				+1.5
1,167,286	-				+1.0
1,167,286	-				-3.5
1,167,286	-				+3.7
1,167,326	+				+1.9
1,167,327	-				-3.3
1,167,338	+				+2.8
1,167,339	-				+0.0
1,167,339	-				+1.0
1,167,339	-				+0.2
1,167,341	-				+2.5
1,167,341	-				-0.3
1,167,341	-				+0.5
1,167,341	-				+1.6
1,167,344	+				+2.2
1,167,344	+				+0.2
1,167,344	+				+1.7
1,167,350	+				+0.1
1,167,350	+				+1.9
1,167,351	-				-1.2
1,167,351	-				-0.5
1,167,351	-				-1.2
1,167,352	+				-2.9
1,167,353	-				+0.8
1,167,406	+				-0.6
1,167,406	+				-0.1
1,167,407	-				-0.1
1,167,407	-				-0.6
1,167,553	+				+0.1
1,167,559	+				-0.3
1,167,560	-				+1.9
1,167,562	-				-3.1