Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0998

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,156,280	-				+0.9
1,156,293	+				-1.9
1,156,330	-				-1.5
1,156,366	-				+1.8
1,156,472	+		Echvi_0997	0.18	-3.0
1,156,472	+		Echvi_0997	0.18	+0.5
1,156,473	-		Echvi_0997	0.18	-1.2
1,156,474	+		Echvi_0997	0.19	-3.3
1,156,474	+		Echvi_0997	0.19	-2.2
1,156,474	+		Echvi_0997	0.19	-2.6
1,156,475	-		Echvi_0997	0.19	+1.3
1,156,475	-		Echvi_0997	0.19	-3.4
1,156,561	+		Echvi_0997	0.30	-2.1
1,156,562	-		Echvi_0997	0.30	-1.5
1,156,604	-		Echvi_0997	0.36	+0.2
1,156,636	-		Echvi_0997	0.40	-2.1
1,156,636	-		Echvi_0997	0.40	-0.9
1,156,636	-		Echvi_0997	0.40	+1.2
1,156,642	+		Echvi_0997	0.41	-3.7
1,156,642	+		Echvi_0997	0.41	-2.6
1,156,698	+		Echvi_0997	0.48	-1.7
1,156,698	+		Echvi_0997	0.48	-0.4
1,156,778	+		Echvi_0997	0.59	+0.5
1,156,779	-		Echvi_0997	0.59	+1.9
1,156,789	+		Echvi_0997	0.61	+0.5
1,156,794	+		Echvi_0997	0.61	-1.7
1,156,794	+		Echvi_0997	0.61	-3.1
1,156,860	-		Echvi_0997	0.70	+0.4
1,156,902	+		Echvi_0997	0.76	+0.2
1,156,910	+		Echvi_0997	0.77	+1.5
1,156,929	+		Echvi_0997	0.79	+0.2
1,156,929	+		Echvi_0997	0.79	+0.9
1,156,930	-		Echvi_0997	0.79	-0.9
1,156,930	-		Echvi_0997	0.79	-0.6
1,156,957	+		Echvi_0997	0.83	+0.4
1,156,962	+		Echvi_0997	0.84	-1.3
1,156,999	+		Echvi_0997	0.89	-0.1
1,156,999	+		Echvi_0997	0.89	-0.6
1,156,999	+		Echvi_0997	0.89	-1.7
1,156,999	+		Echvi_0997	0.89	-1.1
1,156,999	+		Echvi_0997	0.89	-1.9
1,157,000	-		Echvi_0997	0.89	-1.3
1,157,000	-		Echvi_0997	0.89	-0.9
1,157,000	-		Echvi_0997	0.89	-3.6
1,157,000	-		Echvi_0997	0.89	+0.7
1,157,000	-		Echvi_0997	0.89	-2.3
1,157,000	-		Echvi_0997	0.89	+0.4
1,157,000	-		Echvi_0997	0.89	-0.8
1,157,001	+		Echvi_0997	0.89	+0.9
1,157,002	-		Echvi_0997	0.89	+3.5
1,157,002	-		Echvi_0997	0.89	-1.7
1,157,002	-		Echvi_0997	0.89	+2.3
1,157,002	-		Echvi_0997	0.89	+0.6
1,157,004	-		Echvi_0997	0.89	+0.2
1,157,004	-		Echvi_0997	0.89	+0.2
1,157,004	-		Echvi_0997	0.89	-0.6
1,157,090	-				+3.0
1,157,093	-				+3.6
1,157,139	+				+0.9
1,157,144	+				+0.7
1,157,145	-				+5.1
1,157,220	+				-2.3
1,157,225	+				-0.3
1,157,225	+				-0.3
1,157,256	+				-2.1
1,159,251	+				+1.4
1,159,253	+				+1.4
1,159,253	+				+0.8
1,159,253	+				+1.3
1,159,253	+				-0.9
1,159,254	-				+1.2
1,159,254	-				+0.2
1,159,260	-				-2.4
1,159,265	+				-0.1
1,159,266	-				-3.1
1,159,294	-				-1.2
1,159,306	-				+0.1
1,159,312	+				-0.2
1,159,313	-				+2.1
1,159,313	-				+0.3
1,159,313	-				+0.4
1,159,313	-				+0.9
1,159,332	+				-2.3
1,159,332	+				-4.0
1,159,332	+				+1.5
1,159,332	+				+1.1
1,159,332	+				+1.3
1,159,332	+				-0.1
1,159,333	-				-3.7
1,159,333	-				+2.2
1,159,333	-				+3.2
1,159,348	-				-0.7
1,159,418	+		Echvi_0999	0.16	+0.7
1,159,418	+		Echvi_0999	0.16	-2.7
1,159,418	+		Echvi_0999	0.16	-1.2
1,159,460	-		Echvi_0999	0.22	-2.3
1,159,500	+		Echvi_0999	0.27	+1.6
1,159,512	-		Echvi_0999	0.28	-0.9
1,159,520	+		Echvi_0999	0.30	-3.4
1,159,520	+		Echvi_0999	0.30	+0.9
1,159,520	+		Echvi_0999	0.30	+1.0
1,159,520	+		Echvi_0999	0.30	+3.8
1,159,521	-		Echvi_0999	0.30	+0.9
1,159,564	+		Echvi_0999	0.35	+3.5
1,159,565	-		Echvi_0999	0.35	-0.7
1,159,565	-		Echvi_0999	0.35	+1.4
1,159,565	-		Echvi_0999	0.35	+1.1
1,159,630	-		Echvi_0999	0.44	+2.3
1,159,664	+		Echvi_0999	0.48	-2.3
1,159,665	-		Echvi_0999	0.48	+1.2
1,159,665	-		Echvi_0999	0.48	-2.7
1,159,680	+		Echvi_0999	0.50	-1.8
1,159,709	+		Echvi_0999	0.54	-2.2
1,159,709	+		Echvi_0999	0.54	-0.1
1,159,709	+		Echvi_0999	0.54	+0.8
1,159,806	+		Echvi_0999	0.67	+1.2
1,159,830	+		Echvi_0999	0.70	-3.5
1,159,868	+		Echvi_0999	0.75	-1.1
1,159,869	-		Echvi_0999	0.75	-2.7
1,159,869	-		Echvi_0999	0.75	-0.3
1,159,871	+		Echvi_0999	0.75	-0.2
1,159,871	+		Echvi_0999	0.75	-1.5
1,159,871	+		Echvi_0999	0.75	+3.9
1,159,871	+		Echvi_0999	0.75	-0.1
1,159,872	-		Echvi_0999	0.76	+0.2
1,159,872	-		Echvi_0999	0.76	+1.2
1,159,872	-		Echvi_0999	0.76	-0.3
1,159,881	+		Echvi_0999	0.77	-1.1
1,159,901	+		Echvi_0999	0.79	-1.7
1,159,926	+		Echvi_0999	0.83	-2.2
1,159,926	+		Echvi_0999	0.83	-1.1
1,159,932	-		Echvi_0999	0.83	+0.5
1,159,932	-		Echvi_0999	0.83	-2.2
1,159,957	+		Echvi_0999	0.87	-2.2
1,159,958	-		Echvi_0999	0.87	-2.7
1,159,961	+		Echvi_0999	0.87	+0.2
1,159,961	+		Echvi_0999	0.87	+0.1
1,159,962	-		Echvi_0999	0.87	+0.9
1,159,962	-		Echvi_0999	0.87	+0.7
1,159,962	-		Echvi_0999	0.87	-1.8
1,160,056	+				+2.2
1,160,073	+				-0.9
1,160,078	-				-2.8
1,160,078	-				-0.7
1,160,078	-				+0.2
1,160,105	+				-0.8
1,160,165	+				-1.1