Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0890

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,018,514	+		Echvi_0889	0.46	+1.0
1,018,514	+		Echvi_0889	0.46	+1.5
1,018,514	+		Echvi_0889	0.46	+0.7
1,018,551	+		Echvi_0889	0.50	-0.4
1,018,551	+		Echvi_0889	0.50	+0.4
1,018,551	+		Echvi_0889	0.50	-0.6
1,018,567	-		Echvi_0889	0.52	-3.9
1,018,714	+		Echvi_0889	0.69	-1.1
1,018,715	-		Echvi_0889	0.69	+2.7
1,018,772	-		Echvi_0889	0.75	+1.9
1,018,806	+		Echvi_0889	0.79	-0.7
1,018,806	+		Echvi_0889	0.79	+1.1
1,018,807	-		Echvi_0889	0.80	-1.0
1,018,818	-		Echvi_0889	0.81	-0.5
1,018,818	-		Echvi_0889	0.81	-3.4
1,018,818	-		Echvi_0889	0.81	+0.7
1,018,831	+		Echvi_0889	0.82	+2.3
1,018,831	+		Echvi_0889	0.82	+0.9
1,018,831	+		Echvi_0889	0.82	+3.5
1,018,831	+		Echvi_0889	0.82	-0.2
1,018,832	-		Echvi_0889	0.82	-0.8
1,018,833	+		Echvi_0889	0.83	+2.0
1,018,833	+		Echvi_0889	0.83	+0.6
1,018,834	-		Echvi_0889	0.83	-1.3
1,018,834	-		Echvi_0889	0.83	-2.5
1,018,834	-		Echvi_0889	0.83	-1.2
1,018,834	-		Echvi_0889	0.83	+1.5
1,018,834	-		Echvi_0889	0.83	+2.2
1,018,834	-		Echvi_0889	0.83	-1.1
1,018,840	-		Echvi_0889	0.83	+3.2
1,018,840	-		Echvi_0889	0.83	+1.2
1,018,843	+		Echvi_0889	0.84	+0.6
1,018,843	+		Echvi_0889	0.84	+2.7
1,018,981	-				+2.2
1,018,997	+				+1.6
1,019,000	+				+0.3
1,019,000	+				+0.6
1,019,000	+				+1.3
1,019,000	+				-0.8
1,019,001	-				+4.6
1,019,001	-				-0.4
1,019,001	-				-2.1
1,019,002	+				-1.4
1,019,003	-				+0.6
1,019,003	-				+1.2
1,019,003	-				+1.6
1,019,003	-				+0.8
1,019,004	+				-1.5
1,019,004	+				+1.5
1,019,004	+				+1.7
1,019,004	+				-0.3
1,019,004	+				+1.5
1,019,004	+				+0.2
1,019,004	+				+2.5
1,019,004	+				-2.7
1,019,004	+				+1.2
1,019,005	-				+0.5
1,019,005	-				+0.2
1,019,005	-				-0.8
1,019,005	-				+2.0
1,019,005	-				-1.6
1,019,007	+				+4.5
1,019,007	+				+0.4
1,019,007	+				+0.8
1,019,008	-				-2.6
1,019,026	+				-2.1
1,019,041	-				+1.2
1,019,090	+				+1.1
1,019,091	-				+1.5
1,019,091	-				+2.5
1,019,094	+				+0.2
1,019,095	-				-0.6
1,019,099	+				-0.9
1,019,209	+				+2.8
1,019,328	+				-0.3
1,019,329	-				-1.3
1,019,354	+				-0.1
1,019,355	-				+2.5
1,019,357	-				-1.1
1,019,419	+				+1.5
1,019,440	+				+1.1
1,019,440	+				+2.0
1,019,441	-				-0.3
1,019,451	-				+1.6
1,019,477	-				+1.3
1,019,486	-				+0.8
1,019,487	+				-1.6
1,019,491	-				-1.7
1,019,500	-				+0.5
1,019,525	+				-2.9
1,019,525	+				+0.7
1,019,603	+				-2.1
1,019,607	+				+0.6
1,019,608	-		Echvi_0890	0.10	-1.6
1,019,608	-		Echvi_0890	0.10	+0.9
1,019,623	+		Echvi_0890	0.11	-0.6
1,019,624	-		Echvi_0890	0.11	+2.1
1,019,624	-		Echvi_0890	0.11	-2.2
1,019,624	-		Echvi_0890	0.11	-1.4
1,019,624	-		Echvi_0890	0.11	+1.4
1,019,624	-		Echvi_0890	0.11	-2.4
1,019,630	-		Echvi_0890	0.12	-0.6
1,019,685	+		Echvi_0890	0.16	-1.2
1,019,686	-		Echvi_0890	0.16	-2.6
1,019,709	+		Echvi_0890	0.18	-1.8
1,019,709	+		Echvi_0890	0.18	+2.4
1,019,709	+		Echvi_0890	0.18	+0.8
1,019,709	+		Echvi_0890	0.18	-0.6
1,019,710	-		Echvi_0890	0.18	-0.6
1,019,710	-		Echvi_0890	0.18	+0.8
1,019,714	-		Echvi_0890	0.18	-1.7
1,019,723	+		Echvi_0890	0.19	+0.5
1,019,724	-		Echvi_0890	0.19	-2.7
1,019,724	-		Echvi_0890	0.19	+0.2
1,019,752	+		Echvi_0890	0.21	+0.2
1,019,774	+		Echvi_0890	0.23	-2.9
1,019,845	+		Echvi_0890	0.28	+3.6
1,019,845	+		Echvi_0890	0.28	-2.0
1,019,845	+		Echvi_0890	0.28	+0.4
1,019,845	+		Echvi_0890	0.28	-1.9
1,019,845	+		Echvi_0890	0.28	+0.5
1,019,845	+		Echvi_0890	0.28	+1.4
1,019,846	-		Echvi_0890	0.28	+0.8
1,019,846	-		Echvi_0890	0.28	+1.7
1,019,846	-		Echvi_0890	0.28	-1.2
1,019,852	+		Echvi_0890	0.29	-0.8
1,019,853	-		Echvi_0890	0.29	+1.5
1,019,908	-		Echvi_0890	0.33	-1.5
1,019,928	-		Echvi_0890	0.34	-2.5
1,019,943	+		Echvi_0890	0.36	-0.3
1,019,943	+		Echvi_0890	0.36	-0.2
1,020,067	+		Echvi_0890	0.45	-1.1
1,020,067	+		Echvi_0890	0.45	-0.1
1,020,067	+		Echvi_0890	0.45	+0.8
1,020,121	+		Echvi_0890	0.49	+2.1
1,020,141	+		Echvi_0890	0.51	+0.3
1,020,141	+		Echvi_0890	0.51	-2.4
1,020,141	+		Echvi_0890	0.51	-0.3
1,020,141	+		Echvi_0890	0.51	-0.6
1,020,141	+		Echvi_0890	0.51	-0.3
1,020,141	+		Echvi_0890	0.51	-1.7
1,020,142	-		Echvi_0890	0.51	-1.1
1,020,142	-		Echvi_0890	0.51	+0.5
1,020,142	-		Echvi_0890	0.51	-0.9
1,020,142	-		Echvi_0890	0.51	+1.9
1,020,142	-		Echvi_0890	0.51	-0.9
1,020,142	-		Echvi_0890	0.51	-0.5
1,020,142	-		Echvi_0890	0.51	-0.4
1,020,146	-		Echvi_0890	0.51	+1.9
1,020,172	+		Echvi_0890	0.53	-1.5
1,020,242	-		Echvi_0890	0.58	-1.6
1,020,275	-		Echvi_0890	0.61	-1.6
1,020,282	+		Echvi_0890	0.62	-1.8
1,020,282	+		Echvi_0890	0.62	+1.4
1,020,294	+		Echvi_0890	0.62	+0.5
1,020,409	+		Echvi_0890	0.71	+1.0
1,020,409	+		Echvi_0890	0.71	+0.9
1,020,412	+		Echvi_0890	0.71	+0.2
1,020,412	+		Echvi_0890	0.71	-2.6
1,020,413	-		Echvi_0890	0.72	+0.3
1,020,413	-		Echvi_0890	0.72	+0.1
1,020,430	-		Echvi_0890	0.73	-1.5
1,020,533	+		Echvi_0890	0.81	+0.7
1,020,534	-		Echvi_0890	0.81	-0.3
1,020,571	-		Echvi_0890	0.84	+0.8
1,020,595	-		Echvi_0890	0.85	+0.5
1,020,719	-				-3.2
1,020,729	+				+0.9
1,020,730	-				+1.7
1,020,730	-				-2.0
1,020,730	-				+1.1
1,020,782	+				+1.7
1,020,790	+				+1.7
1,020,806	-				-1.3
1,020,810	-				+1.1
1,020,810	-				+2.8
1,020,818	+				+2.3
1,020,818	+				+0.8
1,020,818	+				-1.3
1,020,818	+				-2.2
1,020,819	-				-0.1
1,020,819	-				-3.5
1,020,819	-				-3.2
1,020,819	-				-2.7
1,020,840	+				-2.8
1,020,913	+				+1.9
1,020,913	+				-1.1
1,020,917	+				+0.2
1,020,917	+				-0.9
1,020,918	-				-2.1
1,020,950	+				+0.7
1,020,950	+				-0.9
1,020,968	-				+1.2
1,020,982	-		Echvi_0891	0.10	+1.0
1,021,079	+		Echvi_0891	0.26	-0.6
1,021,080	-		Echvi_0891	0.26	+1.8
1,021,154	+		Echvi_0891	0.38	-0.1
1,021,157	+		Echvi_0891	0.39	-2.4
1,021,225	+		Echvi_0891	0.50	-0.3
1,021,256	+				+2.5
1,021,257	-		Echvi_0891	0.55	-0.9
1,021,456	-		Echvi_0891	0.88	-2.8
1,021,460	-		Echvi_0891	0.89	-0.7
1,021,460	-		Echvi_0891	0.89	+1.3
1,021,470	+				-1.4
1,021,471	-				+0.5
1,021,471	-				-0.1
1,021,471	-				+0.7
1,021,498	+				-2.6
1,021,527	+				-0.1
1,021,532	+				-1.2
1,021,532	+				-2.3
1,021,532	+				-0.6
1,021,533	-				-2.4
1,021,533	-				-0.3
1,021,533	-				-1.2
1,021,552	-				+0.8
1,021,552	-				-2.0
1,021,643	+		Echvi_0892	0.13	-2.3
1,021,659	-		Echvi_0892	0.17	-1.6
1,021,688	-		Echvi_0892	0.25	-1.4
1,021,722	+		Echvi_0892	0.34	-1.3
1,021,722	+		Echvi_0892	0.34	+0.5
1,021,722	+		Echvi_0892	0.34	-1.5
1,021,741	+		Echvi_0892	0.39	+0.2
1,021,741	+		Echvi_0892	0.39	+0.4
1,021,741	+		Echvi_0892	0.39	-0.3
1,021,742	-		Echvi_0892	0.40	-1.9