Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0882

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
1,009,636	-		Echvi_0881	0.65	+1.4
1,009,640	+		Echvi_0881	0.65	-2.6
1,009,740	+		Echvi_0881	0.69	-0.5
1,009,740	+		Echvi_0881	0.69	+0.3
1,009,740	+		Echvi_0881	0.69	+0.2
1,009,740	+		Echvi_0881	0.69	+0.2
1,009,741	-		Echvi_0881	0.69	-1.6
1,009,741	-		Echvi_0881	0.69	+2.3
1,009,741	-		Echvi_0881	0.69	-2.6
1,009,749	+		Echvi_0881	0.70	-0.1
1,009,749	+		Echvi_0881	0.70	+2.4
1,009,750	-		Echvi_0881	0.70	+0.2
1,009,751	+		Echvi_0881	0.70	+1.1
1,009,751	+		Echvi_0881	0.70	+0.3
1,009,752	-		Echvi_0881	0.70	+2.6
1,009,890	+		Echvi_0881	0.75	+1.5
1,009,890	+		Echvi_0881	0.75	+2.5
1,009,890	+		Echvi_0881	0.75	-1.9
1,009,891	-		Echvi_0881	0.75	+4.5
1,009,966	+		Echvi_0881	0.78	-1.2
1,009,967	-		Echvi_0881	0.78	-1.3
1,009,967	-		Echvi_0881	0.78	-1.6
1,009,967	-		Echvi_0881	0.78	+0.9
1,009,983	-		Echvi_0881	0.79	+1.7
1,009,995	+		Echvi_0881	0.79	-0.5
1,009,996	-		Echvi_0881	0.79	+1.7
1,009,996	-		Echvi_0881	0.79	+1.9
1,010,145	-		Echvi_0881	0.85	-1.6
1,010,153	+		Echvi_0881	0.86	+0.5
1,010,217	-		Echvi_0881	0.88	-1.4
1,010,223	-		Echvi_0881	0.89	-1.1
1,010,223	-		Echvi_0881	0.89	-0.1
1,010,444	+				+1.0
1,010,444	+				-2.1
1,010,444	+				+1.2
1,010,444	+				+1.4
1,010,445	-				+0.7
1,010,445	-				-1.5
1,010,445	-				-3.1
1,010,445	-				-0.6
1,010,464	+				+1.5
1,010,464	+				+1.8
1,010,464	+				+3.0
1,010,464	+				+2.3
1,010,498	-				-1.7
1,010,557	+				-0.6
1,010,557	+				+1.4
1,010,557	+				-0.6
1,010,557	+				-1.4
1,010,557	+				+2.5
1,010,557	+				-2.3
1,010,558	-				+0.4
1,010,558	-				+1.5
1,010,558	-				-1.3
1,010,560	-				-0.3
1,010,560	-				+0.4
1,010,565	-				+1.1
1,010,565	-				+2.3
1,010,580	+				+0.4
1,010,581	-				+2.0
1,010,599	+				-2.5
1,010,599	+				+0.9
1,010,599	+				+2.7
1,010,600	-				+0.9
1,010,600	-				+0.2
1,010,600	-				+1.2
1,010,613	+				-1.0
1,010,614	-				+0.8
1,010,617	+				-0.6
1,010,617	+				-1.3
1,010,617	+				-1.9
1,010,618	-				+0.3
1,010,644	-				+0.4
1,010,757	-		Echvi_0882	0.12	+3.4
1,010,766	+		Echvi_0882	0.13	+2.2
1,011,040	+		Echvi_0882	0.28	+1.4
1,011,040	+		Echvi_0882	0.28	-0.5
1,011,040	+		Echvi_0882	0.28	+1.9
1,011,040	+		Echvi_0882	0.28	+1.8
1,011,040	+		Echvi_0882	0.28	+2.9
1,011,041	-		Echvi_0882	0.28	-1.1
1,011,041	-		Echvi_0882	0.28	-2.0
1,011,140	+		Echvi_0882	0.34	+0.9
1,011,140	+		Echvi_0882	0.34	+0.6
1,011,193	+		Echvi_0882	0.37	+1.9
1,011,193	+		Echvi_0882	0.37	+1.6
1,011,237	+		Echvi_0882	0.39	-0.1
1,011,237	+		Echvi_0882	0.39	+2.9
1,011,239	+		Echvi_0882	0.39	-1.6
1,011,239	+		Echvi_0882	0.39	-1.9
1,011,255	+		Echvi_0882	0.40	+0.8
1,011,256	-		Echvi_0882	0.40	-0.6
1,011,261	-		Echvi_0882	0.40	+1.8
1,011,372	+		Echvi_0882	0.47	+2.2
1,011,373	-		Echvi_0882	0.47	+1.2
1,011,373	-		Echvi_0882	0.47	+1.7
1,011,413	+		Echvi_0882	0.49	+1.1
1,011,413	+		Echvi_0882	0.49	+0.2
1,011,452	+		Echvi_0882	0.51	+3.0
1,011,497	-		Echvi_0882	0.54	+1.2
1,011,497	-		Echvi_0882	0.54	+0.8
1,011,517	+		Echvi_0882	0.55	+0.5
1,011,517	+		Echvi_0882	0.55	+2.5
1,011,524	+		Echvi_0882	0.55	+3.9
1,011,524	+		Echvi_0882	0.55	-0.3
1,011,524	+		Echvi_0882	0.55	+1.5
1,011,525	-		Echvi_0882	0.55	-0.5
1,011,525	-		Echvi_0882	0.55	+2.3
1,011,525	-		Echvi_0882	0.55	+0.5
1,011,525	-		Echvi_0882	0.55	+0.5
1,011,610	-		Echvi_0882	0.60	-0.1
1,011,610	-		Echvi_0882	0.60	+3.4
1,011,610	-		Echvi_0882	0.60	-0.8
1,011,768	+		Echvi_0882	0.69	+2.2
1,011,768	+		Echvi_0882	0.69	-1.0
1,011,781	+		Echvi_0882	0.69	+3.2
1,011,847	+		Echvi_0882	0.73	+2.0
1,011,847	+		Echvi_0882	0.73	+1.5
1,011,847	+		Echvi_0882	0.73	+2.5
1,011,847	+		Echvi_0882	0.73	+0.2
1,011,868	+		Echvi_0882	0.74	+0.5
1,011,869	-		Echvi_0882	0.74	+2.2
1,011,869	-		Echvi_0882	0.74	+3.1
1,011,869	-		Echvi_0882	0.74	-0.1
1,011,893	-		Echvi_0882	0.76	+1.9
1,011,911	+		Echvi_0882	0.77	+0.2
1,011,937	+		Echvi_0882	0.78	+0.9
1,011,986	+		Echvi_0882	0.81	-1.9
1,011,986	+		Echvi_0882	0.81	-1.1
1,012,132	+		Echvi_0882	0.89	+0.2
1,012,138	+		Echvi_0882	0.89	-1.5
1,012,182	+				+0.8
1,012,212	-				+2.5
1,012,213	+				-0.1
1,012,223	-				-1.4
1,012,229	-				+4.1
1,012,230	+				+2.7
1,012,230	+				+0.7
1,012,231	-				+2.9
1,012,319	-				-1.5
1,012,350	-				+0.2
1,012,377	+				-3.5
1,012,377	+				+0.4
1,012,377	+				-2.2
1,012,378	-				+0.7
1,012,410	+				-0.1
1,012,410	+				-0.6
1,012,411	-				-0.4
1,012,415	-				+2.3
1,012,415	-				-1.5
1,012,452	+		Echvi_0883	0.24	+1.1
1,012,455	+		Echvi_0883	0.26	-2.8
1,012,455	+		Echvi_0883	0.26	-2.0
1,012,456	-		Echvi_0883	0.27	-0.9
1,012,456	-		Echvi_0883	0.27	+0.6
1,012,480	-		Echvi_0883	0.42	+0.8
1,012,480	-		Echvi_0883	0.42	+0.4
1,012,498	-		Echvi_0883	0.54	+3.3
1,012,498	-		Echvi_0883	0.54	-3.3
1,012,500	+		Echvi_0883	0.56	+1.8
1,012,500	+		Echvi_0883	0.56	+0.4
1,012,500	+		Echvi_0883	0.56	-2.4
1,012,501	-		Echvi_0883	0.56	-1.3
1,012,501	-		Echvi_0883	0.56	+1.0
1,012,505	-		Echvi_0883	0.59	-0.9
1,012,515	+		Echvi_0883	0.65	-0.7
1,012,546	+		Echvi_0883	0.86	-0.3
1,012,546	+		Echvi_0883	0.86	-1.9
1,012,565	+				-2.1
1,012,566	-				-0.1
1,012,566	-				+0.4
1,012,568	+				-0.8
1,012,588	+				-1.1
1,012,588	+				-0.9
1,012,589	-				-0.1
1,012,589	-				+1.5
1,012,589	-				-1.4
1,012,704	+				-0.3
1,012,704	+				-0.5
1,012,705	-				+0.2
1,012,741	+				+1.5
1,012,742	-				+1.6
1,012,743	+				-1.6
1,012,743	+				-0.3
1,012,744	-				-0.1
1,012,744	-				-0.3
1,012,744	-				+0.9
1,012,744	-				-0.8
1,012,744	-				-0.6
1,012,751	+				-1.5
1,012,752	-				-0.7
1,012,761	+				+2.2
1,012,761	+				-0.8
1,012,761	+				-1.5
1,012,761	+				+1.5
1,012,761	+				-1.4
1,012,761	+				+0.9
1,012,762	-				-2.6
1,012,762	-				+2.9
1,012,770	+				-0.1
1,012,771	-				+0.7
1,012,801	+				+1.4
1,012,801	+				-1.3
1,012,802	-				+2.6
1,012,802	-				+0.4
1,012,802	-				-1.7
1,012,802	-				+2.2
1,012,802	-				+1.7
1,012,813	-				+0.6
1,012,893	+				+1.9
1,012,894	-				+0.4
1,012,894	-				-1.5
1,012,897	+				-1.7
1,012,897	+				-0.9
1,012,897	+				-1.0
1,012,897	+				-1.3
1,012,898	-				-2.2
1,012,905	+				-1.8
1,012,910	+				+1.1
1,012,910	+				+2.1
1,012,911	-				-0.8
1,012,911	-				+0.5
1,012,959	-				+1.5
1,012,959	-				+1.3
1,012,959	-				+0.5
1,012,959	-				-0.8
1,012,964	-				+0.4
1,012,964	-				+3.5
1,012,964	-				-0.9
1,012,964	-				-0.8
1,012,964	-				+3.1
1,012,964	-				-1.1
1,012,966	-				+1.9
1,012,966	-				+0.3
1,012,966	-				+0.1
1,012,966	-				-0.8
1,012,968	-				-1.7
1,012,968	-				+0.6
1,012,968	-				+4.1
1,012,968	-				+0.2
1,012,968	-				+0.7
1,012,971	-				+1.0
1,013,003	+				+0.8
1,013,068	+				-2.5
1,013,069	-				+2.0
1,013,113	+				-2.6