Experiment: m.b. D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0703 and Echvi_0704 are separated by 128 nucleotides Echvi_0704 and Echvi_0705 are separated by 122 nucleotides Echvi_0705 and Echvi_0706 are separated by 99 nucleotides Echvi_0706 and Echvi_0707 are separated by 102 nucleotides Echvi_0707 and Echvi_0708 are separated by 5 nucleotides
Echvi_0703: Echvi_0703 - hypothetical protein, at 796,050 to 796,541
_0703
Echvi_0704: Echvi_0704 - hypothetical protein, at 796,670 to 797,131
_0704
Echvi_0705: Echvi_0705 - hypothetical protein, at 797,254 to 797,748
_0705
Echvi_0706: Echvi_0706 - hypothetical protein, at 797,848 to 797,946
_0706
Echvi_0707: Echvi_0707 - Uncharacterized protein conserved in bacteria, at 798,049 to 798,519
_0707
Echvi_0708: Echvi_0708 - transcription termination factor NusA, at 798,525 to 799,772
_0708
Position (kb) 797
798 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 796.257 kb on - strand, within Echvi_0703 at 796.274 kb on + strand, within Echvi_0703 at 796.275 kb on - strand, within Echvi_0703 at 796.337 kb on - strand, within Echvi_0703 at 796.337 kb on - strand, within Echvi_0703 at 796.345 kb on - strand, within Echvi_0703 at 796.401 kb on + strand, within Echvi_0703 at 796.401 kb on + strand, within Echvi_0703 at 796.401 kb on + strand, within Echvi_0703 at 796.402 kb on - strand, within Echvi_0703 at 796.433 kb on + strand, within Echvi_0703 at 796.434 kb on - strand, within Echvi_0703 at 796.434 kb on - strand, within Echvi_0703 at 796.463 kb on + strand, within Echvi_0703 at 796.464 kb on - strand, within Echvi_0703 at 796.486 kb on + strand, within Echvi_0703 at 796.487 kb on - strand, within Echvi_0703 at 796.512 kb on - strand at 796.539 kb on + strand at 796.540 kb on - strand at 796.540 kb on - strand at 796.557 kb on - strand at 796.558 kb on + strand at 796.570 kb on + strand at 796.570 kb on + strand at 796.571 kb on - strand at 796.571 kb on - strand at 796.571 kb on - strand at 796.636 kb on + strand at 796.637 kb on - strand at 796.648 kb on + strand at 796.648 kb on + strand at 796.648 kb on + strand at 796.649 kb on - strand at 796.649 kb on - strand at 796.649 kb on - strand at 796.661 kb on + strand at 796.681 kb on + strand at 796.712 kb on - strand at 796.784 kb on - strand, within Echvi_0704 at 796.784 kb on - strand, within Echvi_0704 at 796.787 kb on + strand, within Echvi_0704 at 796.787 kb on + strand, within Echvi_0704 at 796.787 kb on + strand, within Echvi_0704 at 796.788 kb on - strand, within Echvi_0704 at 796.792 kb on - strand, within Echvi_0704 at 796.797 kb on + strand, within Echvi_0704 at 796.797 kb on + strand, within Echvi_0704 at 796.798 kb on - strand, within Echvi_0704 at 796.798 kb on - strand, within Echvi_0704 at 796.826 kb on + strand, within Echvi_0704 at 796.864 kb on + strand, within Echvi_0704 at 796.864 kb on + strand, within Echvi_0704 at 796.864 kb on + strand, within Echvi_0704 at 796.864 kb on + strand, within Echvi_0704 at 796.927 kb on + strand, within Echvi_0704 at 796.927 kb on + strand, within Echvi_0704 at 796.927 kb on + strand, within Echvi_0704 at 796.927 kb on + strand, within Echvi_0704 at 796.931 kb on - strand, within Echvi_0704 at 796.931 kb on - strand, within Echvi_0704 at 796.936 kb on + strand, within Echvi_0704 at 796.979 kb on - strand, within Echvi_0704 at 797.003 kb on - strand, within Echvi_0704 at 797.003 kb on - strand, within Echvi_0704 at 797.003 kb on - strand, within Echvi_0704 at 797.091 kb on - strand at 797.094 kb on + strand at 797.107 kb on + strand at 797.110 kb on + strand at 797.110 kb on + strand at 797.111 kb on - strand at 797.111 kb on - strand at 797.120 kb on - strand at 797.188 kb on - strand at 797.196 kb on + strand at 797.196 kb on + strand at 797.205 kb on + strand at 797.206 kb on - strand at 797.217 kb on + strand at 797.228 kb on + strand at 797.228 kb on + strand at 797.230 kb on + strand at 797.237 kb on + strand at 797.238 kb on - strand at 797.238 kb on - strand at 797.238 kb on - strand at 797.238 kb on - strand at 797.238 kb on - strand at 797.238 kb on - strand at 797.277 kb on + strand at 797.314 kb on + strand, within Echvi_0705 at 797.315 kb on - strand, within Echvi_0705 at 797.344 kb on + strand, within Echvi_0705 at 797.344 kb on + strand, within Echvi_0705 at 797.345 kb on - strand, within Echvi_0705 at 797.347 kb on - strand, within Echvi_0705 at 797.347 kb on - strand, within Echvi_0705 at 797.347 kb on - strand, within Echvi_0705 at 797.352 kb on + strand, within Echvi_0705 at 797.353 kb on - strand, within Echvi_0705 at 797.362 kb on - strand, within Echvi_0705 at 797.377 kb on - strand, within Echvi_0705 at 797.393 kb on + strand, within Echvi_0705 at 797.393 kb on + strand, within Echvi_0705 at 797.409 kb on - strand, within Echvi_0705 at 797.435 kb on + strand, within Echvi_0705 at 797.435 kb on + strand, within Echvi_0705 at 797.436 kb on - strand, within Echvi_0705 at 797.436 kb on - strand, within Echvi_0705 at 797.441 kb on - strand, within Echvi_0705 at 797.461 kb on - strand, within Echvi_0705 at 797.564 kb on + strand, within Echvi_0705 at 797.570 kb on + strand, within Echvi_0705 at 797.570 kb on + strand, within Echvi_0705 at 797.571 kb on - strand, within Echvi_0705 at 797.571 kb on - strand, within Echvi_0705 at 797.571 kb on - strand, within Echvi_0705 at 797.594 kb on + strand, within Echvi_0705 at 797.594 kb on + strand, within Echvi_0705 at 797.595 kb on - strand, within Echvi_0705 at 797.608 kb on + strand, within Echvi_0705 at 797.658 kb on - strand, within Echvi_0705 at 797.658 kb on - strand, within Echvi_0705 at 797.658 kb on - strand, within Echvi_0705 at 797.708 kb on - strand at 797.717 kb on + strand at 797.723 kb on + strand at 797.723 kb on + strand at 797.724 kb on - strand at 797.724 kb on - strand at 797.724 kb on - strand at 797.724 kb on - strand at 797.724 kb on - strand at 797.747 kb on - strand at 797.823 kb on - strand at 797.946 kb on + strand at 797.950 kb on + strand at 797.993 kb on + strand at 798.035 kb on + strand at 798.035 kb on + strand at 798.039 kb on + strand at 798.039 kb on + strand at 798.204 kb on + strand, within Echvi_0707 at 798.262 kb on + strand, within Echvi_0707
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.064 mg/ml remove 796,257 - Echvi_0703 0.42 +0.9 796,274 + Echvi_0703 0.46 -1.8 796,275 - Echvi_0703 0.46 -0.3 796,337 - Echvi_0703 0.58 -1.5 796,337 - Echvi_0703 0.58 -0.9 796,345 - Echvi_0703 0.60 +1.5 796,401 + Echvi_0703 0.71 -1.0 796,401 + Echvi_0703 0.71 -2.8 796,401 + Echvi_0703 0.71 -0.1 796,402 - Echvi_0703 0.72 +1.5 796,433 + Echvi_0703 0.78 +1.7 796,434 - Echvi_0703 0.78 -1.6 796,434 - Echvi_0703 0.78 +2.2 796,463 + Echvi_0703 0.84 +1.6 796,464 - Echvi_0703 0.84 +0.1 796,486 + Echvi_0703 0.89 -2.2 796,487 - Echvi_0703 0.89 -2.2 796,512 - -2.3 796,539 + +2.8 796,540 - +1.0 796,540 - -1.4 796,557 - +2.3 796,558 + +2.4 796,570 + -1.1 796,570 + -0.7 796,571 - -0.5 796,571 - +1.5 796,571 - -0.3 796,636 + +0.9 796,637 - +3.4 796,648 + +0.5 796,648 + -1.3 796,648 + +1.1 796,649 - -2.2 796,649 - +0.1 796,649 - -2.7 796,661 + -1.5 796,681 + -0.2 796,712 - +1.2 796,784 - Echvi_0704 0.25 +2.2 796,784 - Echvi_0704 0.25 +0.8 796,787 + Echvi_0704 0.25 +0.9 796,787 + Echvi_0704 0.25 +0.9 796,787 + Echvi_0704 0.25 -1.4 796,788 - Echvi_0704 0.26 -1.9 796,792 - Echvi_0704 0.26 -2.3 796,797 + Echvi_0704 0.27 -3.0 796,797 + Echvi_0704 0.27 -1.3 796,798 - Echvi_0704 0.28 +2.2 796,798 - Echvi_0704 0.28 -2.0 796,826 + Echvi_0704 0.34 -3.9 796,864 + Echvi_0704 0.42 +2.2 796,864 + Echvi_0704 0.42 -1.3 796,864 + Echvi_0704 0.42 +1.4 796,864 + Echvi_0704 0.42 +1.5 796,927 + Echvi_0704 0.56 +1.6 796,927 + Echvi_0704 0.56 -4.2 796,927 + Echvi_0704 0.56 -1.6 796,927 + Echvi_0704 0.56 +1.8 796,931 - Echvi_0704 0.56 -1.9 796,931 - Echvi_0704 0.56 +2.7 796,936 + Echvi_0704 0.58 -1.4 796,979 - Echvi_0704 0.67 -2.3 797,003 - Echvi_0704 0.72 -0.5 797,003 - Echvi_0704 0.72 +1.1 797,003 - Echvi_0704 0.72 +1.4 797,091 - +0.5 797,094 + +1.7 797,107 + +0.5 797,110 + +0.3 797,110 + -1.7 797,111 - -0.6 797,111 - +2.1 797,120 - +0.9 797,188 - +0.8 797,196 + -2.0 797,196 + -2.0 797,205 + -0.1 797,206 - -0.6 797,217 + -1.7 797,228 + +1.4 797,228 + -2.1 797,230 + +1.0 797,237 + -1.1 797,238 - +2.9 797,238 - +1.5 797,238 - -1.2 797,238 - -0.7 797,238 - +0.9 797,238 - +1.4 797,277 + +1.5 797,314 + Echvi_0705 0.12 +0.7 797,315 - Echvi_0705 0.12 +2.0 797,344 + Echvi_0705 0.18 +0.5 797,344 + Echvi_0705 0.18 -1.5 797,345 - Echvi_0705 0.18 +2.9 797,347 - Echvi_0705 0.19 +1.7 797,347 - Echvi_0705 0.19 +1.3 797,347 - Echvi_0705 0.19 +1.3 797,352 + Echvi_0705 0.20 -2.2 797,353 - Echvi_0705 0.20 +1.3 797,362 - Echvi_0705 0.22 -1.0 797,377 - Echvi_0705 0.25 +1.8 797,393 + Echvi_0705 0.28 +0.2 797,393 + Echvi_0705 0.28 +0.2 797,409 - Echvi_0705 0.31 -0.7 797,435 + Echvi_0705 0.37 +2.1 797,435 + Echvi_0705 0.37 -1.4 797,436 - Echvi_0705 0.37 +0.2 797,436 - Echvi_0705 0.37 -0.5 797,441 - Echvi_0705 0.38 -2.0 797,461 - Echvi_0705 0.42 -2.0 797,564 + Echvi_0705 0.63 -3.2 797,570 + Echvi_0705 0.64 -0.5 797,570 + Echvi_0705 0.64 +0.1 797,571 - Echvi_0705 0.64 +1.0 797,571 - Echvi_0705 0.64 +4.0 797,571 - Echvi_0705 0.64 +1.1 797,594 + Echvi_0705 0.69 -0.3 797,594 + Echvi_0705 0.69 -1.1 797,595 - Echvi_0705 0.69 -1.7 797,608 + Echvi_0705 0.72 +2.1 797,658 - Echvi_0705 0.82 -1.0 797,658 - Echvi_0705 0.82 -2.3 797,658 - Echvi_0705 0.82 -2.6 797,708 - +3.1 797,717 + -1.8 797,723 + -0.7 797,723 + -3.2 797,724 - -2.0 797,724 - -0.8 797,724 - -0.5 797,724 - +1.2 797,724 - +1.5 797,747 - -1.0 797,823 - +0.6 797,946 + -1.0 797,950 + -0.8 797,993 + +1.4 798,035 + +0.5 798,035 + +0.9 798,039 + -1.1 798,039 + -0.7 798,204 + Echvi_0707 0.33 +0.9 798,262 + Echvi_0707 0.45 -0.2
Or see this region's nucleotide sequence