Experiment: m.b. D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0679 and Echvi_0680 are separated by 355 nucleotides Echvi_0680 and Echvi_0681 are separated by 1 nucleotides
Echvi_0679: Echvi_0679 - hypothetical protein, at 763,257 to 764,255
_0679
Echvi_0680: Echvi_0680 - RND family efflux transporter, MFP subunit, at 764,611 to 765,693
_0680
Echvi_0681: Echvi_0681 - Cation/multidrug efflux pump, at 765,695 to 768,757
_0681
Position (kb) 764
765
766 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 763.659 kb on + strand, within Echvi_0679 at 763.660 kb on - strand, within Echvi_0679 at 763.660 kb on - strand, within Echvi_0679 at 763.662 kb on + strand, within Echvi_0679 at 763.662 kb on + strand, within Echvi_0679 at 763.663 kb on - strand, within Echvi_0679 at 763.663 kb on - strand, within Echvi_0679 at 763.663 kb on - strand, within Echvi_0679 at 763.678 kb on + strand, within Echvi_0679 at 763.679 kb on - strand, within Echvi_0679 at 763.694 kb on - strand, within Echvi_0679 at 763.694 kb on - strand, within Echvi_0679 at 763.718 kb on + strand, within Echvi_0679 at 763.738 kb on - strand, within Echvi_0679 at 763.739 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.861 kb on + strand, within Echvi_0679 at 763.862 kb on - strand, within Echvi_0679 at 763.862 kb on - strand, within Echvi_0679 at 763.862 kb on - strand, within Echvi_0679 at 763.862 kb on - strand, within Echvi_0679 at 763.926 kb on + strand, within Echvi_0679 at 763.926 kb on + strand, within Echvi_0679 at 763.926 kb on + strand, within Echvi_0679 at 763.926 kb on + strand, within Echvi_0679 at 763.927 kb on - strand, within Echvi_0679 at 763.950 kb on + strand, within Echvi_0679 at 763.950 kb on + strand, within Echvi_0679 at 763.950 kb on + strand, within Echvi_0679 at 763.951 kb on - strand, within Echvi_0679 at 763.994 kb on + strand, within Echvi_0679 at 764.046 kb on + strand, within Echvi_0679 at 764.047 kb on - strand, within Echvi_0679 at 764.103 kb on + strand, within Echvi_0679 at 764.103 kb on + strand, within Echvi_0679 at 764.231 kb on + strand at 764.231 kb on + strand at 764.305 kb on + strand at 764.329 kb on - strand at 764.352 kb on - strand at 764.388 kb on - strand at 764.392 kb on + strand at 764.416 kb on + strand at 764.568 kb on - strand at 764.590 kb on + strand at 764.591 kb on - strand at 764.630 kb on + strand at 764.640 kb on - strand at 764.676 kb on - strand at 764.687 kb on + strand at 764.688 kb on - strand at 764.931 kb on + strand, within Echvi_0680 at 764.986 kb on + strand, within Echvi_0680 at 764.987 kb on - strand, within Echvi_0680 at 765.049 kb on + strand, within Echvi_0680 at 765.049 kb on + strand, within Echvi_0680 at 765.050 kb on - strand, within Echvi_0680 at 765.050 kb on - strand, within Echvi_0680 at 765.070 kb on + strand, within Echvi_0680 at 765.071 kb on - strand, within Echvi_0680 at 765.071 kb on - strand, within Echvi_0680 at 765.071 kb on - strand, within Echvi_0680 at 765.075 kb on + strand, within Echvi_0680 at 765.076 kb on - strand, within Echvi_0680 at 765.150 kb on - strand, within Echvi_0680 at 765.150 kb on - strand, within Echvi_0680 at 765.210 kb on + strand, within Echvi_0680 at 765.210 kb on + strand, within Echvi_0680 at 765.211 kb on - strand, within Echvi_0680 at 765.211 kb on - strand, within Echvi_0680 at 765.338 kb on - strand, within Echvi_0680 at 765.459 kb on - strand, within Echvi_0680 at 765.459 kb on - strand, within Echvi_0680 at 765.644 kb on + strand at 765.644 kb on + strand at 765.644 kb on + strand at 765.705 kb on + strand at 765.706 kb on - strand at 765.714 kb on + strand at 765.714 kb on + strand at 765.714 kb on + strand at 765.715 kb on - strand at 765.715 kb on - strand at 765.721 kb on + strand at 765.722 kb on - strand at 765.848 kb on + strand at 765.848 kb on + strand at 765.849 kb on - strand at 765.849 kb on - strand at 765.849 kb on - strand at 765.849 kb on - strand at 765.849 kb on - strand at 765.852 kb on + strand at 765.852 kb on + strand at 765.853 kb on - strand at 765.917 kb on - strand at 765.968 kb on - strand at 765.997 kb on + strand at 765.997 kb on + strand at 766.109 kb on - strand, within Echvi_0681 at 766.114 kb on - strand, within Echvi_0681 at 766.171 kb on + strand, within Echvi_0681 at 766.172 kb on - strand, within Echvi_0681 at 766.306 kb on - strand, within Echvi_0681 at 766.312 kb on + strand, within Echvi_0681 at 766.375 kb on - strand, within Echvi_0681 at 766.448 kb on - strand, within Echvi_0681 at 766.573 kb on + strand, within Echvi_0681 at 766.574 kb on - strand, within Echvi_0681 at 766.574 kb on - strand, within Echvi_0681 at 766.579 kb on + strand, within Echvi_0681 at 766.579 kb on + strand, within Echvi_0681 at 766.584 kb on + strand, within Echvi_0681 at 766.584 kb on + strand, within Echvi_0681 at 766.605 kb on + strand, within Echvi_0681 at 766.638 kb on + strand, within Echvi_0681 at 766.639 kb on - strand, within Echvi_0681 at 766.639 kb on - strand, within Echvi_0681 at 766.639 kb on - strand, within Echvi_0681 at 766.664 kb on - strand, within Echvi_0681 at 766.670 kb on + strand, within Echvi_0681 at 766.670 kb on + strand, within Echvi_0681 at 766.671 kb on - strand, within Echvi_0681 at 766.673 kb on - strand, within Echvi_0681
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.064 mg/ml remove 763,659 + Echvi_0679 0.40 -0.5 763,660 - Echvi_0679 0.40 -2.4 763,660 - Echvi_0679 0.40 -1.0 763,662 + Echvi_0679 0.41 +1.0 763,662 + Echvi_0679 0.41 +0.2 763,663 - Echvi_0679 0.41 -0.1 763,663 - Echvi_0679 0.41 +1.1 763,663 - Echvi_0679 0.41 -2.6 763,678 + Echvi_0679 0.42 -1.4 763,679 - Echvi_0679 0.42 -1.3 763,694 - Echvi_0679 0.44 -2.0 763,694 - Echvi_0679 0.44 -1.4 763,718 + Echvi_0679 0.46 -2.3 763,738 - Echvi_0679 0.48 +0.0 763,739 + Echvi_0679 0.48 +0.5 763,861 + Echvi_0679 0.60 -0.7 763,861 + Echvi_0679 0.60 -0.8 763,861 + Echvi_0679 0.60 -0.1 763,861 + Echvi_0679 0.60 +0.9 763,861 + Echvi_0679 0.60 -1.6 763,861 + Echvi_0679 0.60 +1.5 763,861 + Echvi_0679 0.60 +2.1 763,862 - Echvi_0679 0.61 -1.4 763,862 - Echvi_0679 0.61 -1.7 763,862 - Echvi_0679 0.61 +1.0 763,862 - Echvi_0679 0.61 +1.5 763,926 + Echvi_0679 0.67 -0.0 763,926 + Echvi_0679 0.67 -1.4 763,926 + Echvi_0679 0.67 -2.6 763,926 + Echvi_0679 0.67 -0.7 763,927 - Echvi_0679 0.67 +0.2 763,950 + Echvi_0679 0.69 +0.2 763,950 + Echvi_0679 0.69 -1.3 763,950 + Echvi_0679 0.69 -0.5 763,951 - Echvi_0679 0.69 -0.3 763,994 + Echvi_0679 0.74 +3.3 764,046 + Echvi_0679 0.79 -0.6 764,047 - Echvi_0679 0.79 -0.7 764,103 + Echvi_0679 0.85 -1.3 764,103 + Echvi_0679 0.85 -0.1 764,231 + +2.2 764,231 + -2.3 764,305 + -0.5 764,329 - -2.0 764,352 - -2.1 764,388 - -0.7 764,392 + +0.7 764,416 + -0.3 764,568 - -1.0 764,590 + -0.3 764,591 - +3.7 764,630 + +0.7 764,640 - +0.2 764,676 - -3.5 764,687 + -2.1 764,688 - +0.9 764,931 + Echvi_0680 0.30 -1.2 764,986 + Echvi_0680 0.35 +0.8 764,987 - Echvi_0680 0.35 -3.0 765,049 + Echvi_0680 0.40 -0.7 765,049 + Echvi_0680 0.40 -2.9 765,050 - Echvi_0680 0.41 -1.8 765,050 - Echvi_0680 0.41 +0.0 765,070 + Echvi_0680 0.42 -0.3 765,071 - Echvi_0680 0.42 -0.7 765,071 - Echvi_0680 0.42 +1.7 765,071 - Echvi_0680 0.42 -1.7 765,075 + Echvi_0680 0.43 +0.5 765,076 - Echvi_0680 0.43 -0.3 765,150 - Echvi_0680 0.50 -0.3 765,150 - Echvi_0680 0.50 -3.3 765,210 + Echvi_0680 0.55 +0.0 765,210 + Echvi_0680 0.55 +0.3 765,211 - Echvi_0680 0.55 +0.2 765,211 - Echvi_0680 0.55 +2.0 765,338 - Echvi_0680 0.67 -2.0 765,459 - Echvi_0680 0.78 -1.9 765,459 - Echvi_0680 0.78 +0.9 765,644 + -2.4 765,644 + +1.5 765,644 + +0.6 765,705 + -0.8 765,706 - -1.4 765,714 + -0.3 765,714 + -0.5 765,714 + -0.1 765,715 - -1.1 765,715 - +0.1 765,721 + -1.2 765,722 - -1.0 765,848 + +2.5 765,848 + -2.6 765,849 - +0.9 765,849 - -1.1 765,849 - +1.1 765,849 - -2.0 765,849 - -0.1 765,852 + -0.8 765,852 + +0.5 765,853 - -2.2 765,917 - -3.4 765,968 - -2.9 765,997 + -1.6 765,997 + -0.1 766,109 - Echvi_0681 0.14 -1.8 766,114 - Echvi_0681 0.14 -1.4 766,171 + Echvi_0681 0.16 -0.8 766,172 - Echvi_0681 0.16 +0.2 766,306 - Echvi_0681 0.20 -2.5 766,312 + Echvi_0681 0.20 +0.4 766,375 - Echvi_0681 0.22 +1.3 766,448 - Echvi_0681 0.25 -3.6 766,573 + Echvi_0681 0.29 -0.5 766,574 - Echvi_0681 0.29 -1.8 766,574 - Echvi_0681 0.29 -1.9 766,579 + Echvi_0681 0.29 -0.6 766,579 + Echvi_0681 0.29 -1.0 766,584 + Echvi_0681 0.29 -0.8 766,584 + Echvi_0681 0.29 -1.4 766,605 + Echvi_0681 0.30 -2.4 766,638 + Echvi_0681 0.31 -1.3 766,639 - Echvi_0681 0.31 -0.3 766,639 - Echvi_0681 0.31 +1.0 766,639 - Echvi_0681 0.31 +0.9 766,664 - Echvi_0681 0.32 +1.5 766,670 + Echvi_0681 0.32 -2.8 766,670 + Echvi_0681 0.32 -0.1 766,671 - Echvi_0681 0.32 +0.9 766,673 - Echvi_0681 0.32 +1.3
Or see this region's nucleotide sequence