Experiment: m.b. D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0647 and Echvi_0648 are separated by 476 nucleotides Echvi_0648 and Echvi_0649 are separated by 326 nucleotides
Echvi_0647: Echvi_0647 - ferrochelatase, at 730,674 to 731,717
_0647
Echvi_0648: Echvi_0648 - hypothetical protein, at 732,194 to 732,700
_0648
Echvi_0649: Echvi_0649 - Transposase and inactivated derivatives, at 733,027 to 734,085
_0649
Position (kb) 732
733 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 731.723 kb on - strand at 731.734 kb on - strand at 731.742 kb on - strand at 731.743 kb on + strand at 731.743 kb on + strand at 731.797 kb on - strand at 731.797 kb on - strand at 731.797 kb on - strand at 731.836 kb on + strand at 731.843 kb on + strand at 731.857 kb on - strand at 731.866 kb on + strand at 731.902 kb on + strand at 731.903 kb on - strand at 731.903 kb on - strand at 731.903 kb on - strand at 731.903 kb on - strand at 731.909 kb on - strand at 731.909 kb on - strand at 731.946 kb on + strand at 731.946 kb on + strand at 731.947 kb on - strand at 731.955 kb on - strand at 731.967 kb on + strand at 731.968 kb on - strand at 732.014 kb on + strand at 732.085 kb on + strand at 732.096 kb on + strand at 732.097 kb on - strand at 732.116 kb on + strand at 732.163 kb on - strand at 732.163 kb on - strand at 732.170 kb on + strand at 732.171 kb on - strand at 732.187 kb on + strand at 732.259 kb on + strand, within Echvi_0648 at 732.261 kb on + strand, within Echvi_0648 at 732.261 kb on + strand, within Echvi_0648 at 732.262 kb on - strand, within Echvi_0648 at 732.262 kb on - strand, within Echvi_0648 at 732.262 kb on - strand, within Echvi_0648 at 732.262 kb on - strand, within Echvi_0648 at 732.296 kb on + strand, within Echvi_0648 at 732.296 kb on + strand, within Echvi_0648 at 732.296 kb on + strand, within Echvi_0648 at 732.297 kb on - strand, within Echvi_0648 at 732.297 kb on - strand, within Echvi_0648 at 732.297 kb on - strand, within Echvi_0648 at 732.336 kb on - strand, within Echvi_0648 at 732.373 kb on + strand, within Echvi_0648 at 732.648 kb on - strand, within Echvi_0648 at 732.665 kb on + strand at 732.666 kb on - strand at 732.672 kb on - strand at 732.695 kb on - strand at 732.700 kb on + strand at 732.700 kb on + strand at 732.701 kb on - strand at 732.722 kb on - strand at 732.806 kb on + strand at 732.806 kb on + strand at 732.861 kb on + strand at 732.878 kb on + strand at 732.878 kb on + strand at 732.985 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.064 mg/ml remove 731,723 - -0.9 731,734 - -0.4 731,742 - -0.8 731,743 + -1.2 731,743 + -1.0 731,797 - -0.5 731,797 - -0.2 731,797 - -0.1 731,836 + -1.3 731,843 + -0.5 731,857 - -1.5 731,866 + +1.9 731,902 + +0.9 731,903 - -2.0 731,903 - -0.4 731,903 - -2.3 731,903 - +2.2 731,909 - +2.4 731,909 - +0.8 731,946 + -1.5 731,946 + -1.2 731,947 - -1.6 731,955 - -0.4 731,967 + +1.1 731,968 - -1.3 732,014 + +1.6 732,085 + +0.9 732,096 + -2.9 732,097 - -2.9 732,116 + +1.2 732,163 - -1.2 732,163 - -0.3 732,170 + -2.5 732,171 - -0.4 732,187 + -2.9 732,259 + Echvi_0648 0.13 +0.4 732,261 + Echvi_0648 0.13 -2.4 732,261 + Echvi_0648 0.13 -1.6 732,262 - Echvi_0648 0.13 -0.7 732,262 - Echvi_0648 0.13 -1.6 732,262 - Echvi_0648 0.13 -3.3 732,262 - Echvi_0648 0.13 -2.4 732,296 + Echvi_0648 0.20 -1.8 732,296 + Echvi_0648 0.20 -1.9 732,296 + Echvi_0648 0.20 -2.0 732,297 - Echvi_0648 0.20 -1.6 732,297 - Echvi_0648 0.20 +1.9 732,297 - Echvi_0648 0.20 +0.9 732,336 - Echvi_0648 0.28 -0.7 732,373 + Echvi_0648 0.35 -3.3 732,648 - Echvi_0648 0.90 -2.1 732,665 + -0.8 732,666 - -1.4 732,672 - -0.3 732,695 - +0.0 732,700 + +0.9 732,700 + +2.5 732,701 - -3.6 732,722 - -2.3 732,806 + -0.7 732,806 + -2.1 732,861 + +0.8 732,878 + -0.1 732,878 + +0.2 732,985 - -0.4
Or see this region's nucleotide sequence