Experiment: m.b. D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0638 and Echvi_0639 are separated by 335 nucleotides Echvi_0639 and Echvi_0640 are separated by 106 nucleotides Echvi_0640 and Echvi_0641 are separated by 80 nucleotides
Echvi_0638: Echvi_0638 - hypothetical protein, at 722,395 to 723,111
_0638
Echvi_0639: Echvi_0639 - hypothetical protein, at 723,447 to 723,692
_0639
Echvi_0640: Echvi_0640 - hypothetical protein, at 723,799 to 724,092
_0640
Echvi_0641: Echvi_0641 - Transposase and inactivated derivatives, at 724,173 to 725,405
_0641
Position (kb) 723
724 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 722.591 kb on - strand, within Echvi_0638 at 722.659 kb on - strand, within Echvi_0638 at 722.742 kb on + strand, within Echvi_0638 at 722.743 kb on - strand, within Echvi_0638 at 722.748 kb on + strand, within Echvi_0638 at 722.797 kb on - strand, within Echvi_0638 at 722.829 kb on - strand, within Echvi_0638 at 722.912 kb on - strand, within Echvi_0638 at 722.914 kb on + strand, within Echvi_0638 at 722.914 kb on + strand, within Echvi_0638 at 722.915 kb on - strand, within Echvi_0638 at 722.915 kb on - strand, within Echvi_0638 at 722.986 kb on + strand, within Echvi_0638 at 722.986 kb on + strand, within Echvi_0638 at 722.987 kb on - strand, within Echvi_0638 at 723.005 kb on + strand, within Echvi_0638 at 723.093 kb on - strand at 723.109 kb on + strand at 723.127 kb on - strand at 723.149 kb on - strand at 723.156 kb on + strand at 723.156 kb on + strand at 723.157 kb on - strand at 723.265 kb on + strand at 723.265 kb on + strand at 723.266 kb on - strand at 723.266 kb on - strand at 723.298 kb on + strand at 723.298 kb on + strand at 723.298 kb on + strand at 723.298 kb on + strand at 723.299 kb on - strand at 723.382 kb on + strand at 723.382 kb on + strand at 723.382 kb on + strand at 723.407 kb on - strand at 723.453 kb on + strand at 723.453 kb on + strand at 723.498 kb on - strand, within Echvi_0639 at 723.498 kb on - strand, within Echvi_0639 at 723.503 kb on + strand, within Echvi_0639 at 723.503 kb on + strand, within Echvi_0639 at 723.503 kb on + strand, within Echvi_0639 at 723.503 kb on + strand, within Echvi_0639 at 723.503 kb on + strand, within Echvi_0639 at 723.503 kb on + strand, within Echvi_0639 at 723.504 kb on - strand, within Echvi_0639 at 723.504 kb on - strand, within Echvi_0639 at 723.504 kb on - strand, within Echvi_0639 at 723.504 kb on - strand, within Echvi_0639 at 723.506 kb on + strand, within Echvi_0639 at 723.506 kb on + strand, within Echvi_0639 at 723.507 kb on - strand, within Echvi_0639 at 723.507 kb on - strand, within Echvi_0639 at 723.507 kb on - strand, within Echvi_0639 at 723.507 kb on - strand, within Echvi_0639 at 723.507 kb on - strand, within Echvi_0639 at 723.507 kb on - strand, within Echvi_0639 at 723.507 kb on - strand, within Echvi_0639 at 723.568 kb on + strand, within Echvi_0639 at 723.740 kb on + strand at 723.824 kb on + strand at 723.824 kb on + strand at 723.825 kb on - strand at 723.825 kb on - strand at 723.899 kb on - strand, within Echvi_0640 at 723.926 kb on - strand, within Echvi_0640 at 723.983 kb on + strand, within Echvi_0640 at 723.984 kb on - strand, within Echvi_0640 at 724.003 kb on + strand, within Echvi_0640 at 724.010 kb on - strand, within Echvi_0640 at 724.010 kb on - strand, within Echvi_0640 at 724.016 kb on - strand, within Echvi_0640 at 724.102 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.064 mg/ml remove 722,591 - Echvi_0638 0.27 -0.5 722,659 - Echvi_0638 0.37 -1.4 722,742 + Echvi_0638 0.48 -2.9 722,743 - Echvi_0638 0.49 +1.9 722,748 + Echvi_0638 0.49 -3.5 722,797 - Echvi_0638 0.56 -1.1 722,829 - Echvi_0638 0.61 +2.3 722,912 - Echvi_0638 0.72 +0.2 722,914 + Echvi_0638 0.72 -1.4 722,914 + Echvi_0638 0.72 +1.4 722,915 - Echvi_0638 0.73 +0.2 722,915 - Echvi_0638 0.73 -2.0 722,986 + Echvi_0638 0.82 -0.1 722,986 + Echvi_0638 0.82 -1.6 722,987 - Echvi_0638 0.83 -0.7 723,005 + Echvi_0638 0.85 +1.5 723,093 - +2.4 723,109 + +0.6 723,127 - -1.3 723,149 - -2.2 723,156 + +0.3 723,156 + -0.8 723,157 - -0.8 723,265 + +1.5 723,265 + -1.2 723,266 - +1.3 723,266 - +1.6 723,298 + +1.7 723,298 + +0.6 723,298 + -1.2 723,298 + +1.8 723,299 - +0.6 723,382 + -0.3 723,382 + -1.0 723,382 + -0.5 723,407 - -3.6 723,453 + +1.1 723,453 + -0.7 723,498 - Echvi_0639 0.21 -2.2 723,498 - Echvi_0639 0.21 -1.0 723,503 + Echvi_0639 0.23 -1.4 723,503 + Echvi_0639 0.23 -0.8 723,503 + Echvi_0639 0.23 -0.1 723,503 + Echvi_0639 0.23 -0.8 723,503 + Echvi_0639 0.23 -1.9 723,503 + Echvi_0639 0.23 +0.5 723,504 - Echvi_0639 0.23 -0.5 723,504 - Echvi_0639 0.23 +0.4 723,504 - Echvi_0639 0.23 -0.1 723,504 - Echvi_0639 0.23 -1.2 723,506 + Echvi_0639 0.24 -1.2 723,506 + Echvi_0639 0.24 +1.3 723,507 - Echvi_0639 0.24 -0.1 723,507 - Echvi_0639 0.24 +3.6 723,507 - Echvi_0639 0.24 +0.4 723,507 - Echvi_0639 0.24 +0.6 723,507 - Echvi_0639 0.24 -1.1 723,507 - Echvi_0639 0.24 +1.5 723,507 - Echvi_0639 0.24 -1.5 723,568 + Echvi_0639 0.49 +0.1 723,740 + -1.5 723,824 + -1.7 723,824 + +0.7 723,825 - +2.2 723,825 - +5.3 723,899 - Echvi_0640 0.34 -0.2 723,926 - Echvi_0640 0.43 +0.9 723,983 + Echvi_0640 0.63 -0.7 723,984 - Echvi_0640 0.63 -1.4 724,003 + Echvi_0640 0.69 +0.6 724,010 - Echvi_0640 0.72 -2.3 724,010 - Echvi_0640 0.72 +1.8 724,016 - Echvi_0640 0.74 +0.4 724,102 - -1.6
Or see this region's nucleotide sequence