Experiment: m.b. D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0613 and Echvi_0614 are separated by 155 nucleotides Echvi_0614 and Echvi_0615 overlap by 41 nucleotides Echvi_0615 and Echvi_0616 are separated by 44 nucleotides Echvi_0616 and Echvi_0617 are separated by 120 nucleotides
Echvi_0613: Echvi_0613 - hypothetical protein, at 688,115 to 688,468
_0613
Echvi_0614: Echvi_0614 - hypothetical protein, at 688,624 to 688,851
_0614
Echvi_0615: Echvi_0615 - Integral membrane protein CcmA involved in cell shape determination, at 688,811 to 689,218
_0615
Echvi_0616: Echvi_0616 - Membrane proteins related to metalloendopeptidases, at 689,263 to 690,141
_0616
Echvi_0617: Echvi_0617 - hypothetical protein, at 690,262 to 692,892
_0617
Position (kb) 689
690
691 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 688.293 kb on - strand, within Echvi_0613 at 688.424 kb on + strand, within Echvi_0613 at 688.442 kb on + strand at 688.547 kb on + strand at 688.582 kb on - strand at 688.592 kb on - strand at 688.592 kb on - strand at 688.625 kb on + strand at 688.650 kb on + strand, within Echvi_0614 at 688.662 kb on + strand, within Echvi_0614 at 688.684 kb on + strand, within Echvi_0614 at 688.685 kb on - strand, within Echvi_0614 at 688.786 kb on + strand, within Echvi_0614 at 688.786 kb on + strand, within Echvi_0614 at 688.787 kb on - strand, within Echvi_0614 at 688.787 kb on - strand, within Echvi_0614 at 688.790 kb on + strand, within Echvi_0614 at 688.790 kb on + strand, within Echvi_0614 at 688.790 kb on + strand, within Echvi_0614 at 688.791 kb on - strand, within Echvi_0614 at 688.791 kb on - strand, within Echvi_0614 at 688.795 kb on + strand, within Echvi_0614 at 688.857 kb on - strand, within Echvi_0615 at 688.882 kb on + strand, within Echvi_0615 at 689.030 kb on + strand, within Echvi_0615 at 689.030 kb on + strand, within Echvi_0615 at 689.031 kb on - strand, within Echvi_0615 at 689.031 kb on - strand, within Echvi_0615 at 689.031 kb on - strand, within Echvi_0615 at 689.031 kb on - strand, within Echvi_0615 at 689.118 kb on - strand, within Echvi_0615 at 689.118 kb on - strand, within Echvi_0615 at 689.142 kb on - strand, within Echvi_0615 at 689.154 kb on - strand, within Echvi_0615 at 689.167 kb on + strand, within Echvi_0615 at 689.180 kb on - strand at 689.204 kb on - strand at 689.252 kb on - strand at 689.252 kb on - strand at 689.257 kb on + strand at 689.258 kb on - strand at 689.258 kb on - strand at 689.278 kb on - strand at 689.309 kb on + strand at 689.309 kb on + strand at 689.310 kb on - strand at 689.310 kb on - strand at 689.314 kb on + strand at 689.315 kb on - strand at 689.315 kb on - strand at 689.315 kb on - strand at 689.355 kb on + strand, within Echvi_0616 at 689.356 kb on - strand, within Echvi_0616 at 689.356 kb on - strand, within Echvi_0616 at 689.414 kb on - strand, within Echvi_0616 at 689.416 kb on + strand, within Echvi_0616 at 689.417 kb on - strand, within Echvi_0616 at 689.424 kb on + strand, within Echvi_0616 at 689.467 kb on + strand, within Echvi_0616 at 689.474 kb on + strand, within Echvi_0616 at 689.474 kb on + strand, within Echvi_0616 at 689.474 kb on + strand, within Echvi_0616 at 689.475 kb on - strand, within Echvi_0616 at 689.475 kb on - strand, within Echvi_0616 at 689.653 kb on - strand, within Echvi_0616 at 689.653 kb on - strand, within Echvi_0616 at 689.734 kb on + strand at 689.838 kb on + strand, within Echvi_0616 at 689.842 kb on - strand, within Echvi_0616 at 689.842 kb on - strand, within Echvi_0616 at 689.849 kb on + strand, within Echvi_0616 at 689.866 kb on + strand, within Echvi_0616 at 689.867 kb on - strand, within Echvi_0616 at 689.906 kb on + strand, within Echvi_0616 at 689.906 kb on + strand, within Echvi_0616 at 689.907 kb on - strand, within Echvi_0616 at 689.907 kb on - strand, within Echvi_0616 at 689.908 kb on + strand, within Echvi_0616 at 689.974 kb on + strand, within Echvi_0616 at 689.977 kb on + strand, within Echvi_0616 at 689.977 kb on + strand, within Echvi_0616 at 689.978 kb on - strand, within Echvi_0616 at 690.010 kb on - strand, within Echvi_0616 at 690.021 kb on + strand, within Echvi_0616 at 690.050 kb on - strand, within Echvi_0616 at 690.050 kb on - strand, within Echvi_0616 at 690.098 kb on + strand at 690.102 kb on + strand at 690.134 kb on - strand at 690.155 kb on + strand at 690.171 kb on - strand at 690.174 kb on - strand at 690.190 kb on - strand at 690.225 kb on + strand at 690.336 kb on + strand at 690.337 kb on - strand at 690.349 kb on + strand at 690.349 kb on + strand at 690.349 kb on + strand at 690.380 kb on - strand at 690.401 kb on + strand at 690.401 kb on + strand at 690.402 kb on - strand at 690.423 kb on + strand at 690.423 kb on + strand at 690.433 kb on + strand at 690.434 kb on - strand at 690.445 kb on + strand at 690.445 kb on + strand at 690.445 kb on + strand at 690.445 kb on + strand at 690.445 kb on + strand at 690.446 kb on - strand at 690.446 kb on - strand at 690.446 kb on - strand at 690.446 kb on - strand at 690.446 kb on - strand at 690.446 kb on - strand at 690.447 kb on + strand at 690.448 kb on - strand at 690.448 kb on - strand at 690.448 kb on - strand at 690.466 kb on + strand at 690.466 kb on + strand at 690.467 kb on - strand at 690.572 kb on + strand, within Echvi_0617 at 690.572 kb on + strand, within Echvi_0617 at 690.583 kb on + strand, within Echvi_0617 at 690.583 kb on + strand, within Echvi_0617 at 690.584 kb on - strand, within Echvi_0617 at 690.584 kb on - strand, within Echvi_0617 at 690.610 kb on + strand, within Echvi_0617 at 690.611 kb on - strand, within Echvi_0617 at 690.636 kb on + strand, within Echvi_0617 at 690.643 kb on + strand, within Echvi_0617 at 690.644 kb on - strand, within Echvi_0617 at 690.650 kb on - strand, within Echvi_0617 at 690.650 kb on - strand, within Echvi_0617 at 690.659 kb on + strand, within Echvi_0617 at 690.660 kb on - strand, within Echvi_0617 at 690.719 kb on + strand, within Echvi_0617 at 690.748 kb on + strand, within Echvi_0617 at 690.748 kb on + strand, within Echvi_0617 at 690.748 kb on + strand, within Echvi_0617 at 690.749 kb on - strand, within Echvi_0617 at 690.749 kb on - strand, within Echvi_0617 at 690.749 kb on - strand, within Echvi_0617 at 690.749 kb on - strand, within Echvi_0617 at 690.749 kb on - strand, within Echvi_0617 at 690.749 kb on - strand, within Echvi_0617 at 690.749 kb on - strand, within Echvi_0617 at 690.808 kb on + strand, within Echvi_0617 at 690.826 kb on + strand, within Echvi_0617 at 690.826 kb on + strand, within Echvi_0617 at 690.826 kb on + strand, within Echvi_0617 at 690.826 kb on + strand, within Echvi_0617 at 690.826 kb on + strand, within Echvi_0617 at 690.827 kb on - strand, within Echvi_0617 at 690.827 kb on - strand, within Echvi_0617 at 690.827 kb on - strand, within Echvi_0617 at 690.827 kb on - strand, within Echvi_0617 at 690.827 kb on - strand, within Echvi_0617 at 690.829 kb on + strand, within Echvi_0617 at 690.829 kb on + strand, within Echvi_0617 at 690.829 kb on + strand, within Echvi_0617 at 690.829 kb on + strand, within Echvi_0617 at 690.829 kb on + strand, within Echvi_0617 at 690.829 kb on + strand, within Echvi_0617 at 690.830 kb on - strand, within Echvi_0617 at 690.830 kb on - strand, within Echvi_0617 at 690.924 kb on + strand, within Echvi_0617 at 690.924 kb on + strand, within Echvi_0617 at 690.941 kb on - strand, within Echvi_0617 at 690.980 kb on - strand, within Echvi_0617 at 691.009 kb on + strand, within Echvi_0617 at 691.035 kb on - strand, within Echvi_0617 at 691.035 kb on - strand, within Echvi_0617 at 691.035 kb on - strand, within Echvi_0617 at 691.035 kb on - strand, within Echvi_0617 at 691.036 kb on + strand, within Echvi_0617 at 691.036 kb on + strand, within Echvi_0617 at 691.037 kb on - strand, within Echvi_0617 at 691.077 kb on + strand, within Echvi_0617 at 691.077 kb on + strand, within Echvi_0617 at 691.078 kb on - strand, within Echvi_0617 at 691.096 kb on + strand, within Echvi_0617 at 691.097 kb on - strand, within Echvi_0617 at 691.108 kb on + strand, within Echvi_0617 at 691.109 kb on - strand, within Echvi_0617 at 691.109 kb on - strand, within Echvi_0617 at 691.110 kb on + strand, within Echvi_0617 at 691.110 kb on + strand, within Echvi_0617 at 691.110 kb on + strand, within Echvi_0617 at 691.111 kb on - strand, within Echvi_0617 at 691.111 kb on - strand, within Echvi_0617 at 691.111 kb on - strand, within Echvi_0617 at 691.111 kb on - strand, within Echvi_0617
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.064 mg/ml remove 688,293 - Echvi_0613 0.50 -3.1 688,424 + Echvi_0613 0.87 -2.2 688,442 + -1.7 688,547 + -1.9 688,582 - +3.9 688,592 - +1.7 688,592 - -3.1 688,625 + -0.5 688,650 + Echvi_0614 0.11 -0.8 688,662 + Echvi_0614 0.17 -0.8 688,684 + Echvi_0614 0.26 +0.7 688,685 - Echvi_0614 0.27 -1.8 688,786 + Echvi_0614 0.71 +1.1 688,786 + Echvi_0614 0.71 +0.5 688,787 - Echvi_0614 0.71 -0.5 688,787 - Echvi_0614 0.71 -1.1 688,790 + Echvi_0614 0.73 -1.5 688,790 + Echvi_0614 0.73 -1.3 688,790 + Echvi_0614 0.73 -1.8 688,791 - Echvi_0614 0.73 -0.6 688,791 - Echvi_0614 0.73 +1.7 688,795 + Echvi_0614 0.75 -1.7 688,857 - Echvi_0615 0.11 +1.3 688,882 + Echvi_0615 0.17 -0.8 689,030 + Echvi_0615 0.54 -2.2 689,030 + Echvi_0615 0.54 -1.1 689,031 - Echvi_0615 0.54 +2.5 689,031 - Echvi_0615 0.54 -1.4 689,031 - Echvi_0615 0.54 +3.4 689,031 - Echvi_0615 0.54 -2.7 689,118 - Echvi_0615 0.75 +0.5 689,118 - Echvi_0615 0.75 +1.7 689,142 - Echvi_0615 0.81 -3.2 689,154 - Echvi_0615 0.84 -0.1 689,167 + Echvi_0615 0.87 -0.2 689,180 - -0.1 689,204 - -2.5 689,252 - -0.1 689,252 - +1.5 689,257 + -2.9 689,258 - +2.1 689,258 - -0.0 689,278 - +0.6 689,309 + -0.8 689,309 + -1.1 689,310 - -0.1 689,310 - -1.7 689,314 + +0.4 689,315 - +2.2 689,315 - +3.3 689,315 - +1.5 689,355 + Echvi_0616 0.10 -0.3 689,356 - Echvi_0616 0.11 -1.6 689,356 - Echvi_0616 0.11 +0.9 689,414 - Echvi_0616 0.17 -0.5 689,416 + Echvi_0616 0.17 +1.0 689,417 - Echvi_0616 0.18 +0.1 689,424 + Echvi_0616 0.18 -0.5 689,467 + Echvi_0616 0.23 +1.1 689,474 + Echvi_0616 0.24 +0.4 689,474 + Echvi_0616 0.24 +2.5 689,474 + Echvi_0616 0.24 +0.0 689,475 - Echvi_0616 0.24 -1.5 689,475 - Echvi_0616 0.24 +1.6 689,653 - Echvi_0616 0.44 -1.1 689,653 - Echvi_0616 0.44 +1.9 689,734 + +3.1 689,838 + Echvi_0616 0.65 +0.9 689,842 - Echvi_0616 0.66 -1.4 689,842 - Echvi_0616 0.66 +1.7 689,849 + Echvi_0616 0.67 -2.4 689,866 + Echvi_0616 0.69 +1.0 689,867 - Echvi_0616 0.69 -0.7 689,906 + Echvi_0616 0.73 +2.4 689,906 + Echvi_0616 0.73 +0.8 689,907 - Echvi_0616 0.73 -0.3 689,907 - Echvi_0616 0.73 -1.0 689,908 + Echvi_0616 0.73 +0.6 689,974 + Echvi_0616 0.81 +1.2 689,977 + Echvi_0616 0.81 +1.7 689,977 + Echvi_0616 0.81 +1.7 689,978 - Echvi_0616 0.81 +2.8 690,010 - Echvi_0616 0.85 +1.1 690,021 + Echvi_0616 0.86 -0.1 690,050 - Echvi_0616 0.90 -0.7 690,050 - Echvi_0616 0.90 +1.0 690,098 + +1.7 690,102 + +2.2 690,134 - -1.8 690,155 + +1.9 690,171 - -1.7 690,174 - -1.4 690,190 - -1.8 690,225 + -1.2 690,336 + +3.1 690,337 - +2.6 690,349 + +3.4 690,349 + +2.5 690,349 + +2.0 690,380 - +1.9 690,401 + +2.1 690,401 + +1.8 690,402 - +2.3 690,423 + +2.4 690,423 + +3.3 690,433 + +2.8 690,434 - +1.9 690,445 + +2.0 690,445 + +2.8 690,445 + +3.5 690,445 + +3.3 690,445 + +2.9 690,446 - +2.7 690,446 - -1.2 690,446 - +1.7 690,446 - +2.7 690,446 - +3.6 690,446 - +2.9 690,447 + +2.7 690,448 - +2.2 690,448 - +3.0 690,448 - +0.6 690,466 + +3.7 690,466 + +3.0 690,467 - +1.8 690,572 + Echvi_0617 0.12 +2.9 690,572 + Echvi_0617 0.12 +3.5 690,583 + Echvi_0617 0.12 +3.4 690,583 + Echvi_0617 0.12 -0.5 690,584 - Echvi_0617 0.12 +3.2 690,584 - Echvi_0617 0.12 +0.8 690,610 + Echvi_0617 0.13 +3.0 690,611 - Echvi_0617 0.13 +2.0 690,636 + Echvi_0617 0.14 +4.0 690,643 + Echvi_0617 0.14 +3.0 690,644 - Echvi_0617 0.15 +3.4 690,650 - Echvi_0617 0.15 +2.3 690,650 - Echvi_0617 0.15 +2.0 690,659 + Echvi_0617 0.15 +3.3 690,660 - Echvi_0617 0.15 +2.7 690,719 + Echvi_0617 0.17 +3.0 690,748 + Echvi_0617 0.18 +4.7 690,748 + Echvi_0617 0.18 +3.0 690,748 + Echvi_0617 0.18 +2.7 690,749 - Echvi_0617 0.19 +2.1 690,749 - Echvi_0617 0.19 +3.3 690,749 - Echvi_0617 0.19 +2.7 690,749 - Echvi_0617 0.19 +2.1 690,749 - Echvi_0617 0.19 +2.9 690,749 - Echvi_0617 0.19 +2.5 690,749 - Echvi_0617 0.19 +3.2 690,808 + Echvi_0617 0.21 +2.8 690,826 + Echvi_0617 0.21 +3.6 690,826 + Echvi_0617 0.21 +2.0 690,826 + Echvi_0617 0.21 +3.2 690,826 + Echvi_0617 0.21 +2.7 690,826 + Echvi_0617 0.21 +2.4 690,827 - Echvi_0617 0.21 +3.2 690,827 - Echvi_0617 0.21 +2.6 690,827 - Echvi_0617 0.21 +1.9 690,827 - Echvi_0617 0.21 +3.6 690,827 - Echvi_0617 0.21 +1.6 690,829 + Echvi_0617 0.22 +3.8 690,829 + Echvi_0617 0.22 +3.4 690,829 + Echvi_0617 0.22 -0.8 690,829 + Echvi_0617 0.22 +1.1 690,829 + Echvi_0617 0.22 +3.1 690,829 + Echvi_0617 0.22 +3.1 690,830 - Echvi_0617 0.22 +3.3 690,830 - Echvi_0617 0.22 +2.4 690,924 + Echvi_0617 0.25 +3.2 690,924 + Echvi_0617 0.25 +2.6 690,941 - Echvi_0617 0.26 +1.8 690,980 - Echvi_0617 0.27 +1.4 691,009 + Echvi_0617 0.28 +3.4 691,035 - Echvi_0617 0.29 +2.6 691,035 - Echvi_0617 0.29 +2.4 691,035 - Echvi_0617 0.29 +2.5 691,035 - Echvi_0617 0.29 +2.7 691,036 + Echvi_0617 0.29 +2.6 691,036 + Echvi_0617 0.29 +2.3 691,037 - Echvi_0617 0.29 +2.5 691,077 + Echvi_0617 0.31 +1.1 691,077 + Echvi_0617 0.31 +3.3 691,078 - Echvi_0617 0.31 +2.9 691,096 + Echvi_0617 0.32 +2.1 691,097 - Echvi_0617 0.32 +2.6 691,108 + Echvi_0617 0.32 +2.8 691,109 - Echvi_0617 0.32 +1.8 691,109 - Echvi_0617 0.32 +2.0 691,110 + Echvi_0617 0.32 +4.8 691,110 + Echvi_0617 0.32 +2.5 691,110 + Echvi_0617 0.32 +3.1 691,111 - Echvi_0617 0.32 +2.3 691,111 - Echvi_0617 0.32 -1.1 691,111 - Echvi_0617 0.32 +3.1 691,111 - Echvi_0617 0.32 +1.6
Or see this region's nucleotide sequence