Experiment: m.b. D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0508 and Echvi_0509 are separated by 109 nucleotides Echvi_0509 and Echvi_0510 are separated by 151 nucleotides
Echvi_0508: Echvi_0508 - L-fucose:H+ symporter permease, at 567,670 to 568,965
_0508
Echvi_0509: Echvi_0509 - Predicted oxidoreductases (related to aryl-alcohol dehydrogenases), at 569,075 to 570,109
_0509
Echvi_0510: Echvi_0510 - Transcriptional regulators, at 570,261 to 571,283
_0510
Position (kb) 569
570
571 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 568.086 kb on + strand, within Echvi_0508 at 568.094 kb on - strand, within Echvi_0508 at 568.094 kb on - strand, within Echvi_0508 at 568.094 kb on - strand, within Echvi_0508 at 568.110 kb on - strand, within Echvi_0508 at 568.110 kb on - strand, within Echvi_0508 at 568.110 kb on - strand, within Echvi_0508 at 568.157 kb on + strand, within Echvi_0508 at 568.167 kb on + strand, within Echvi_0508 at 568.170 kb on - strand, within Echvi_0508 at 568.177 kb on + strand, within Echvi_0508 at 568.196 kb on - strand, within Echvi_0508 at 568.200 kb on - strand, within Echvi_0508 at 568.361 kb on + strand, within Echvi_0508 at 568.362 kb on - strand, within Echvi_0508 at 568.362 kb on - strand, within Echvi_0508 at 568.362 kb on - strand, within Echvi_0508 at 568.362 kb on - strand, within Echvi_0508 at 568.397 kb on - strand, within Echvi_0508 at 568.477 kb on - strand, within Echvi_0508 at 568.574 kb on + strand, within Echvi_0508 at 568.574 kb on + strand, within Echvi_0508 at 568.574 kb on + strand, within Echvi_0508 at 568.575 kb on - strand, within Echvi_0508 at 568.575 kb on - strand, within Echvi_0508 at 568.623 kb on - strand, within Echvi_0508 at 568.623 kb on - strand, within Echvi_0508 at 568.623 kb on - strand, within Echvi_0508 at 568.646 kb on + strand, within Echvi_0508 at 568.647 kb on - strand, within Echvi_0508 at 568.726 kb on - strand, within Echvi_0508 at 568.727 kb on + strand, within Echvi_0508 at 568.728 kb on - strand, within Echvi_0508 at 568.728 kb on - strand, within Echvi_0508 at 568.731 kb on + strand, within Echvi_0508 at 568.732 kb on - strand, within Echvi_0508 at 568.733 kb on + strand, within Echvi_0508 at 568.745 kb on + strand, within Echvi_0508 at 568.745 kb on + strand, within Echvi_0508 at 568.746 kb on - strand, within Echvi_0508 at 568.775 kb on + strand, within Echvi_0508 at 568.776 kb on - strand, within Echvi_0508 at 568.801 kb on - strand, within Echvi_0508 at 568.816 kb on - strand, within Echvi_0508 at 568.857 kb on + strand at 568.858 kb on - strand at 568.858 kb on - strand at 568.911 kb on + strand at 568.911 kb on + strand at 568.911 kb on + strand at 568.911 kb on + strand at 568.911 kb on + strand at 568.911 kb on + strand at 568.912 kb on - strand at 568.912 kb on - strand at 568.912 kb on - strand at 568.912 kb on - strand at 568.912 kb on - strand at 568.912 kb on - strand at 568.936 kb on + strand at 568.950 kb on + strand at 568.974 kb on + strand at 569.018 kb on + strand at 569.029 kb on + strand at 569.353 kb on - strand, within Echvi_0509 at 569.353 kb on - strand, within Echvi_0509 at 569.353 kb on - strand, within Echvi_0509 at 569.353 kb on - strand, within Echvi_0509 at 569.404 kb on + strand, within Echvi_0509 at 569.404 kb on + strand, within Echvi_0509 at 569.405 kb on - strand, within Echvi_0509 at 569.405 kb on - strand, within Echvi_0509 at 569.434 kb on + strand, within Echvi_0509 at 569.434 kb on + strand, within Echvi_0509 at 569.601 kb on + strand, within Echvi_0509 at 569.664 kb on + strand, within Echvi_0509 at 569.664 kb on + strand, within Echvi_0509 at 569.664 kb on + strand, within Echvi_0509 at 569.664 kb on + strand, within Echvi_0509 at 569.665 kb on - strand, within Echvi_0509 at 569.665 kb on - strand, within Echvi_0509 at 569.703 kb on + strand, within Echvi_0509 at 569.755 kb on - strand, within Echvi_0509 at 569.938 kb on - strand, within Echvi_0509 at 569.977 kb on - strand, within Echvi_0509 at 570.009 kb on - strand at 570.114 kb on - strand at 570.114 kb on - strand at 570.154 kb on + strand at 570.405 kb on + strand, within Echvi_0510 at 570.406 kb on - strand, within Echvi_0510 at 570.408 kb on - strand, within Echvi_0510 at 570.487 kb on - strand, within Echvi_0510 at 570.514 kb on + strand, within Echvi_0510 at 570.543 kb on + strand, within Echvi_0510 at 570.543 kb on + strand, within Echvi_0510 at 570.543 kb on + strand, within Echvi_0510 at 570.553 kb on + strand, within Echvi_0510 at 570.553 kb on + strand, within Echvi_0510 at 570.553 kb on + strand, within Echvi_0510 at 570.554 kb on - strand, within Echvi_0510 at 570.613 kb on + strand, within Echvi_0510 at 570.694 kb on + strand, within Echvi_0510 at 570.694 kb on + strand, within Echvi_0510 at 570.694 kb on + strand, within Echvi_0510 at 570.694 kb on + strand, within Echvi_0510 at 570.694 kb on + strand, within Echvi_0510 at 570.695 kb on - strand, within Echvi_0510 at 570.695 kb on - strand, within Echvi_0510 at 570.695 kb on - strand, within Echvi_0510 at 570.779 kb on + strand, within Echvi_0510 at 570.780 kb on - strand, within Echvi_0510 at 570.892 kb on + strand, within Echvi_0510
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.064 mg/ml remove 568,086 + Echvi_0508 0.32 -1.2 568,094 - Echvi_0508 0.33 +4.5 568,094 - Echvi_0508 0.33 +2.2 568,094 - Echvi_0508 0.33 -0.5 568,110 - Echvi_0508 0.34 -2.9 568,110 - Echvi_0508 0.34 -1.6 568,110 - Echvi_0508 0.34 -2.2 568,157 + Echvi_0508 0.38 -1.3 568,167 + Echvi_0508 0.38 +1.7 568,170 - Echvi_0508 0.39 -0.5 568,177 + Echvi_0508 0.39 +0.4 568,196 - Echvi_0508 0.41 -0.1 568,200 - Echvi_0508 0.41 +0.3 568,361 + Echvi_0508 0.53 +0.1 568,362 - Echvi_0508 0.53 -0.7 568,362 - Echvi_0508 0.53 -1.0 568,362 - Echvi_0508 0.53 -1.0 568,362 - Echvi_0508 0.53 +0.8 568,397 - Echvi_0508 0.56 -2.4 568,477 - Echvi_0508 0.62 -2.2 568,574 + Echvi_0508 0.70 -0.1 568,574 + Echvi_0508 0.70 -1.7 568,574 + Echvi_0508 0.70 -2.3 568,575 - Echvi_0508 0.70 -1.7 568,575 - Echvi_0508 0.70 -0.3 568,623 - Echvi_0508 0.74 -1.1 568,623 - Echvi_0508 0.74 +0.9 568,623 - Echvi_0508 0.74 -0.0 568,646 + Echvi_0508 0.75 +1.5 568,647 - Echvi_0508 0.75 -0.3 568,726 - Echvi_0508 0.81 +1.6 568,727 + Echvi_0508 0.82 +0.5 568,728 - Echvi_0508 0.82 +0.7 568,728 - Echvi_0508 0.82 -0.5 568,731 + Echvi_0508 0.82 +0.0 568,732 - Echvi_0508 0.82 -1.5 568,733 + Echvi_0508 0.82 -1.9 568,745 + Echvi_0508 0.83 +0.2 568,745 + Echvi_0508 0.83 -1.6 568,746 - Echvi_0508 0.83 -0.7 568,775 + Echvi_0508 0.85 -0.5 568,776 - Echvi_0508 0.85 -2.8 568,801 - Echvi_0508 0.87 +1.1 568,816 - Echvi_0508 0.88 -1.2 568,857 + +1.2 568,858 - +3.2 568,858 - -2.3 568,911 + +0.8 568,911 + +0.4 568,911 + +0.5 568,911 + -0.7 568,911 + +1.8 568,911 + +1.0 568,912 - +0.2 568,912 - -0.3 568,912 - -0.7 568,912 - -0.9 568,912 - -1.9 568,912 - -0.5 568,936 + +0.2 568,950 + -1.9 568,974 + -0.3 569,018 + +0.2 569,029 + -1.7 569,353 - Echvi_0509 0.27 -0.3 569,353 - Echvi_0509 0.27 -1.3 569,353 - Echvi_0509 0.27 -1.6 569,353 - Echvi_0509 0.27 -4.1 569,404 + Echvi_0509 0.32 +0.1 569,404 + Echvi_0509 0.32 -1.6 569,405 - Echvi_0509 0.32 -1.5 569,405 - Echvi_0509 0.32 +0.4 569,434 + Echvi_0509 0.35 -2.4 569,434 + Echvi_0509 0.35 +0.4 569,601 + Echvi_0509 0.51 -1.2 569,664 + Echvi_0509 0.57 -1.2 569,664 + Echvi_0509 0.57 +0.3 569,664 + Echvi_0509 0.57 -0.3 569,664 + Echvi_0509 0.57 -2.4 569,665 - Echvi_0509 0.57 -3.2 569,665 - Echvi_0509 0.57 -2.0 569,703 + Echvi_0509 0.61 -0.5 569,755 - Echvi_0509 0.66 +2.9 569,938 - Echvi_0509 0.83 +0.4 569,977 - Echvi_0509 0.87 -1.1 570,009 - -0.5 570,114 - +0.5 570,114 - +0.3 570,154 + +0.9 570,405 + Echvi_0510 0.14 +1.5 570,406 - Echvi_0510 0.14 -1.1 570,408 - Echvi_0510 0.14 -1.1 570,487 - Echvi_0510 0.22 -1.5 570,514 + Echvi_0510 0.25 +3.9 570,543 + Echvi_0510 0.28 +0.8 570,543 + Echvi_0510 0.28 -0.7 570,543 + Echvi_0510 0.28 +1.0 570,553 + Echvi_0510 0.29 -2.1 570,553 + Echvi_0510 0.29 -0.6 570,553 + Echvi_0510 0.29 -0.9 570,554 - Echvi_0510 0.29 -2.1 570,613 + Echvi_0510 0.34 -3.8 570,694 + Echvi_0510 0.42 +0.7 570,694 + Echvi_0510 0.42 -2.0 570,694 + Echvi_0510 0.42 +0.1 570,694 + Echvi_0510 0.42 -1.1 570,694 + Echvi_0510 0.42 -0.8 570,695 - Echvi_0510 0.42 -1.0 570,695 - Echvi_0510 0.42 -2.4 570,695 - Echvi_0510 0.42 -0.1 570,779 + Echvi_0510 0.51 -2.1 570,780 - Echvi_0510 0.51 +1.8 570,892 + Echvi_0510 0.62 +1.6
Or see this region's nucleotide sequence