Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0507

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
565,398	+		Echvi_0506	0.37	+0.2
565,398	+		Echvi_0506	0.37	-0.8
565,399	-		Echvi_0506	0.37	-1.8
565,400	+		Echvi_0506	0.38	-3.4
565,400	+		Echvi_0506	0.38	+2.6
565,400	+		Echvi_0506	0.38	+0.5
565,400	+		Echvi_0506	0.38	-1.9
565,421	-		Echvi_0506	0.39	+2.6
565,421	-		Echvi_0506	0.39	+3.6
565,576	-		Echvi_0506	0.53	-0.1
565,576	-		Echvi_0506	0.53	-2.2
565,639	+		Echvi_0506	0.59	+0.8
565,639	+		Echvi_0506	0.59	+1.3
565,639	+		Echvi_0506	0.59	+0.1
565,640	-		Echvi_0506	0.59	+1.6
565,640	-		Echvi_0506	0.59	-2.0
565,676	+		Echvi_0506	0.63	-2.6
565,736	-		Echvi_0506	0.68	-1.2
565,752	+		Echvi_0506	0.69	+1.7
565,887	+		Echvi_0506	0.82	-2.2
565,888	-		Echvi_0506	0.82	+0.9
565,895	+		Echvi_0506	0.82	-2.1
565,896	-		Echvi_0506	0.83	+1.1
565,957	-		Echvi_0506	0.88	-2.0
566,016	+				-1.8
566,053	-				-0.9
566,088	-				+1.2
566,107	+				-1.6
566,107	+				-0.6
566,108	-				+3.1
566,108	-				-1.2
566,108	-				-2.0
566,138	+				-0.1
566,163	+				+0.9
566,291	+				-0.2
566,292	-				+0.5
566,292	-				+3.9
566,344	+				-0.5
566,344	+				-0.1
566,345	-				-0.5
566,350	-				-2.9
566,353	-				+1.5
566,374	+				+0.1
566,375	-				-0.0
566,450	-				+1.2
566,450	-				-2.9
566,450	-				-0.4
566,451	+				+1.0
566,451	+				+2.5
566,451	+				-0.3
566,452	-				-0.1
566,452	-				+1.7
566,452	-				-1.8
566,569	+		Echvi_0507	0.21	-1.8
566,570	-		Echvi_0507	0.22	-0.1
566,598	-		Echvi_0507	0.24	-0.8
566,607	+		Echvi_0507	0.25	-1.7
566,607	+		Echvi_0507	0.25	-0.3
566,607	+		Echvi_0507	0.25	+0.2
566,608	-		Echvi_0507	0.25	-1.8
566,746	+		Echvi_0507	0.39	-0.5
566,747	-		Echvi_0507	0.39	-1.6
566,747	-		Echvi_0507	0.39	-1.5
566,780	+		Echvi_0507	0.42	+0.9
566,780	+		Echvi_0507	0.42	-0.0
567,044	+		Echvi_0507	0.68	-1.9
567,055	+		Echvi_0507	0.69	-1.0
567,055	+		Echvi_0507	0.69	+2.3
567,161	+		Echvi_0507	0.80	-1.2
567,195	-		Echvi_0507	0.83	-2.6
567,278	+				+0.2
567,281	-				-3.5
567,322	+				+2.3
567,322	+				-2.2
567,323	-				+2.2
567,323	-				+0.3
567,353	+				+1.3
567,354	-				-3.7
567,383	-				+0.3
567,383	-				-1.7
567,387	-				+0.5
567,403	+				-0.4
567,502	+				-0.3
567,503	-				+2.5
567,510	+				+1.5
567,539	+				+1.5
567,558	+				-1.2
567,611	+				+0.5
567,612	-				+0.6
567,612	-				-1.5
567,667	-				+0.2
567,667	-				-1.3
567,672	-				-0.5
567,747	-				+1.2
567,793	-				-1.3
567,870	+		Echvi_0508	0.15	+0.4
567,871	-		Echvi_0508	0.16	-1.2
567,874	-		Echvi_0508	0.16	+2.2
567,874	-		Echvi_0508	0.16	-1.8
567,969	+		Echvi_0508	0.23	+1.6
567,969	+		Echvi_0508	0.23	+1.4
567,970	-		Echvi_0508	0.23	-2.6
568,039	-		Echvi_0508	0.28	-0.5
568,066	-				+1.5
568,086	+		Echvi_0508	0.32	-1.2
568,094	-		Echvi_0508	0.33	+4.5
568,094	-		Echvi_0508	0.33	+2.2
568,094	-		Echvi_0508	0.33	-0.5
568,110	-		Echvi_0508	0.34	-2.9
568,110	-		Echvi_0508	0.34	-1.6
568,110	-		Echvi_0508	0.34	-2.2
568,157	+		Echvi_0508	0.38	-1.3
568,167	+		Echvi_0508	0.38	+1.7
568,170	-		Echvi_0508	0.39	-0.5
568,177	+		Echvi_0508	0.39	+0.4
568,196	-		Echvi_0508	0.41	-0.1
568,200	-		Echvi_0508	0.41	+0.3
568,361	+		Echvi_0508	0.53	+0.1
568,362	-		Echvi_0508	0.53	-0.7
568,362	-		Echvi_0508	0.53	-1.0
568,362	-		Echvi_0508	0.53	-1.0
568,362	-		Echvi_0508	0.53	+0.8