Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0505

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
563,438	+		Echvi_0504	0.70	-2.1
563,438	+		Echvi_0504	0.70	+0.8
563,461	+		Echvi_0504	0.70	-0.5
563,461	+		Echvi_0504	0.70	+1.6
563,474	+		Echvi_0504	0.71	-0.5
563,474	+		Echvi_0504	0.71	+3.3
563,475	-		Echvi_0504	0.71	+1.6
563,475	-		Echvi_0504	0.71	-0.0
563,475	-		Echvi_0504	0.71	-1.5
563,475	-		Echvi_0504	0.71	-1.5
563,475	-		Echvi_0504	0.71	+1.2
563,514	+		Echvi_0504	0.72	+0.6
563,514	+		Echvi_0504	0.72	+0.7
563,538	+		Echvi_0504	0.73	-1.5
563,540	+		Echvi_0504	0.73	-1.8
563,540	+		Echvi_0504	0.73	-0.0
563,540	+		Echvi_0504	0.73	-1.0
563,540	+		Echvi_0504	0.73	+0.5
563,540	+		Echvi_0504	0.73	-2.3
563,541	-		Echvi_0504	0.73	+0.3
563,541	-		Echvi_0504	0.73	-0.8
563,541	-		Echvi_0504	0.73	-1.8
563,606	+		Echvi_0504	0.75	+0.2
563,606	+		Echvi_0504	0.75	-0.8
563,606	+		Echvi_0504	0.75	+2.1
563,607	-		Echvi_0504	0.75	+1.3
563,625	+		Echvi_0504	0.75	+0.5
563,688	+		Echvi_0504	0.77	+0.2
563,689	-		Echvi_0504	0.77	-2.0
563,982	+		Echvi_0504	0.87	+0.3
563,983	-		Echvi_0504	0.87	-1.0
564,014	+		Echvi_0504	0.88	-1.6
564,022	-		Echvi_0504	0.88	+2.7
564,022	-		Echvi_0504	0.88	-1.1
564,047	-		Echvi_0504	0.89	-0.1
564,085	-				-1.2
564,086	+				+1.0
564,181	+				+0.2
564,181	+				+0.6
564,181	+				-1.4
564,182	-				+1.6
564,182	-				+1.0
564,182	-				-2.5
564,355	+				-0.4
564,355	+				-0.7
564,356	-				+0.2
564,356	-				+1.4
564,386	+				+1.4
564,399	+				-2.7
564,400	-				-2.2
564,400	-				+1.1
564,400	-				-2.0
564,425	+				+0.2
564,426	-				+0.9
564,434	+				+0.7
564,435	-				+0.8
564,473	+		Echvi_0505	0.11	+0.2
564,500	+		Echvi_0505	0.16	+2.3
564,500	+		Echvi_0505	0.16	+0.5
564,500	+		Echvi_0505	0.16	+0.3
564,501	-		Echvi_0505	0.16	-2.8
564,501	-		Echvi_0505	0.16	-3.2
564,501	-		Echvi_0505	0.16	+0.2
564,501	-		Echvi_0505	0.16	+1.3
564,501	-		Echvi_0505	0.16	+3.6
564,580	-		Echvi_0505	0.29	+3.9
564,592	-		Echvi_0505	0.31	-2.9
564,727	+		Echvi_0505	0.54	+0.6
564,825	+		Echvi_0505	0.71	-1.5
564,899	-		Echvi_0505	0.83	-2.4
564,957	+				-1.0
564,957	+				+2.4
564,958	-				-0.9
564,974	+				+1.5
564,988	+				-1.3
564,988	+				+1.3
564,988	+				+1.7
564,999	+				+2.7
564,999	+				-0.1
564,999	+				-2.6
565,000	-				-0.6
565,000	-				-1.6
565,003	-				+1.2
565,043	+				-1.0
565,043	+				+2.6
565,043	+				+0.8
565,045	+				-1.0
565,052	+				+1.5
565,053	-				+1.0
565,056	+				-0.1
565,056	+				-1.6
565,056	+				-0.3
565,218	-		Echvi_0506	0.21	+1.4
565,218	-		Echvi_0506	0.21	-0.8
565,219	+		Echvi_0506	0.21	+1.2
565,220	-		Echvi_0506	0.21	+0.3
565,227	+		Echvi_0506	0.22	+0.9
565,279	-		Echvi_0506	0.27	+0.7
565,310	+		Echvi_0506	0.29	-2.4
565,311	-		Echvi_0506	0.29	-2.3
565,398	+		Echvi_0506	0.37	+0.2
565,398	+		Echvi_0506	0.37	-0.8
565,399	-		Echvi_0506	0.37	-1.8
565,400	+		Echvi_0506	0.38	-3.4
565,400	+		Echvi_0506	0.38	+2.6
565,400	+		Echvi_0506	0.38	+0.5
565,400	+		Echvi_0506	0.38	-1.9
565,421	-		Echvi_0506	0.39	+2.6
565,421	-		Echvi_0506	0.39	+3.6
565,576	-		Echvi_0506	0.53	-0.1
565,576	-		Echvi_0506	0.53	-2.2
565,639	+		Echvi_0506	0.59	+0.8
565,639	+		Echvi_0506	0.59	+1.3
565,639	+		Echvi_0506	0.59	+0.1
565,640	-		Echvi_0506	0.59	+1.6
565,640	-		Echvi_0506	0.59	-2.0
565,676	+		Echvi_0506	0.63	-2.6
565,736	-		Echvi_0506	0.68	-1.2
565,752	+		Echvi_0506	0.69	+1.7
565,887	+		Echvi_0506	0.82	-2.2
565,888	-		Echvi_0506	0.82	+0.9
565,895	+		Echvi_0506	0.82	-2.1
565,896	-		Echvi_0506	0.83	+1.1
565,957	-		Echvi_0506	0.88	-2.0