Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0481

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
528,511	-		Echvi_0480	0.20	+0.2
528,598	+		Echvi_0480	0.29	+2.3
528,599	-		Echvi_0480	0.29	-1.1
528,599	-		Echvi_0480	0.29	-0.8
528,604	+		Echvi_0480	0.30	-0.0
528,604	+		Echvi_0480	0.30	-0.5
528,632	+		Echvi_0480	0.33	-2.5
528,637	+		Echvi_0480	0.33	-1.0
528,822	+		Echvi_0480	0.53	+1.8
528,822	+		Echvi_0480	0.53	-1.6
528,888	-		Echvi_0480	0.60	+0.0
528,888	-		Echvi_0480	0.60	-1.4
528,988	-		Echvi_0480	0.71	-1.9
528,989	+		Echvi_0480	0.71	-2.1
528,989	+		Echvi_0480	0.71	-1.2
528,990	-		Echvi_0480	0.71	+0.2
528,990	-		Echvi_0480	0.71	-1.8
528,990	-		Echvi_0480	0.71	+2.3
529,134	-		Echvi_0480	0.87	-0.6
529,138	-		Echvi_0480	0.87	-1.3
529,138	-		Echvi_0480	0.87	-0.1
529,226	+				+0.4
529,227	-				-1.9
529,239	+				-1.8
529,240	-				-0.1
529,240	-				-1.0
529,262	-				-0.7
529,274	-				+2.3
529,286	+				+0.5
529,287	-				+0.6
529,287	-				-0.5
529,338	+				-1.8
529,354	+				-1.0
529,399	-				+5.3
529,399	-				-0.1
529,438	-				+1.6
529,438	-				+0.2
529,446	+				-1.8
529,447	-				-1.3
529,447	-				+1.5
529,451	+				-2.6
529,505	-				-2.1
529,505	-				-0.3
529,696	-		Echvi_0481	0.17	-1.8
529,720	-		Echvi_0481	0.18	+0.8
529,739	-		Echvi_0481	0.19	-1.7
529,739	-		Echvi_0481	0.19	-0.7
529,742	+		Echvi_0481	0.20	-1.1
529,743	-		Echvi_0481	0.20	+2.6
529,751	+		Echvi_0481	0.20	+0.2
529,751	+		Echvi_0481	0.20	-0.1
529,764	+		Echvi_0481	0.21	-0.1
529,778	+		Echvi_0481	0.22	+1.1
529,885	-		Echvi_0481	0.29	-2.0
529,885	-		Echvi_0481	0.29	-2.0
530,001	+		Echvi_0481	0.37	-1.8
530,001	+		Echvi_0481	0.37	-0.5
530,201	-		Echvi_0481	0.50	-1.4
530,389	+		Echvi_0481	0.62	-1.0
530,390	-		Echvi_0481	0.62	-1.1
530,411	+		Echvi_0481	0.63	-1.3
530,512	+		Echvi_0481	0.70	-0.4
530,512	+		Echvi_0481	0.70	-0.1
530,512	+		Echvi_0481	0.70	+0.3
530,513	-		Echvi_0481	0.70	+0.9
530,600	-		Echvi_0481	0.76	+0.2
530,610	+		Echvi_0481	0.76	+2.5
530,611	-		Echvi_0481	0.76	+0.6
530,611	-		Echvi_0481	0.76	-0.4
530,611	-		Echvi_0481	0.76	-0.8
530,732	-		Echvi_0481	0.84	+1.7
530,732	-		Echvi_0481	0.84	-2.7
530,732	-		Echvi_0481	0.84	-0.3
530,739	-		Echvi_0481	0.85	+1.0
530,739	-		Echvi_0481	0.85	-1.2
530,751	-		Echvi_0481	0.86	-2.6
530,817	-		Echvi_0481	0.90	+1.5
530,958	-				+2.2
530,984	+				+1.2
530,994	+				-1.2
531,003	+				-0.5
531,007	+				-1.6
531,007	+				-1.3
531,007	+				+1.5
531,010	-				+1.0
531,010	-				+1.3
531,010	-				-0.6
531,101	-				+2.9
531,148	+				-2.4
531,153	+				+0.4
531,207	-				-1.3
531,216	-				-0.3
531,216	-				+1.5
531,268	+		Echvi_0482	0.17	+2.1
531,442	-		Echvi_0482	0.57	+1.1
531,442	-		Echvi_0482	0.57	+1.4
531,622	+				-0.0
531,622	+				+0.5
531,622	+				+5.1
531,623	-				+1.7
531,623	-				+0.5
531,625	-				+3.5
531,625	-				+0.7
531,625	-				-0.2
531,626	+				-1.9
531,627	+				+0.9
531,627	+				-0.8
531,627	+				-2.4
531,627	+				-1.0
531,627	+				-1.8
531,628	-				-0.3
531,628	-				-1.8
531,628	-				+0.4
531,631	+				+1.5
531,631	+				+1.3
531,632	-				-0.8
531,632	-				+0.2
531,637	-				-1.2
531,647	+				+1.5
531,694	+				-2.6
531,695	-				+0.2
531,695	-				-1.7
531,831	+		Echvi_0483	0.11	-2.2
531,832	-		Echvi_0483	0.11	-0.3
531,916	-		Echvi_0483	0.19	-0.8