Experiment: m.b. D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0447 and Echvi_0448 are separated by 14 nucleotides Echvi_0448 and Echvi_0449 are separated by 106 nucleotides
Echvi_0447: Echvi_0447 - hypothetical protein, at 490,376 to 491,695
_0447
Echvi_0448: Echvi_0448 - hypothetical protein, at 491,710 to 492,255
_0448
Echvi_0449: Echvi_0449 - hypothetical protein, at 492,362 to 493,480
_0449
Position (kb) 491
492
493 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 490.769 kb on + strand, within Echvi_0447 at 490.798 kb on + strand, within Echvi_0447 at 490.798 kb on + strand, within Echvi_0447 at 490.800 kb on + strand, within Echvi_0447 at 490.801 kb on - strand, within Echvi_0447 at 490.902 kb on - strand, within Echvi_0447 at 490.910 kb on + strand, within Echvi_0447 at 490.914 kb on + strand, within Echvi_0447 at 490.914 kb on + strand, within Echvi_0447 at 490.914 kb on + strand, within Echvi_0447 at 490.914 kb on + strand, within Echvi_0447 at 490.915 kb on - strand, within Echvi_0447 at 490.915 kb on - strand, within Echvi_0447 at 490.915 kb on - strand, within Echvi_0447 at 490.915 kb on - strand, within Echvi_0447 at 490.915 kb on - strand, within Echvi_0447 at 490.937 kb on - strand, within Echvi_0447 at 490.945 kb on + strand, within Echvi_0447 at 490.945 kb on + strand, within Echvi_0447 at 490.962 kb on - strand, within Echvi_0447 at 490.966 kb on + strand, within Echvi_0447 at 491.010 kb on + strand, within Echvi_0447 at 491.026 kb on + strand, within Echvi_0447 at 491.026 kb on + strand, within Echvi_0447 at 491.026 kb on + strand, within Echvi_0447 at 491.038 kb on + strand, within Echvi_0447 at 491.038 kb on + strand, within Echvi_0447 at 491.058 kb on + strand, within Echvi_0447 at 491.058 kb on + strand, within Echvi_0447 at 491.058 kb on + strand, within Echvi_0447 at 491.058 kb on + strand, within Echvi_0447 at 491.058 kb on + strand, within Echvi_0447 at 491.059 kb on - strand, within Echvi_0447 at 491.084 kb on - strand, within Echvi_0447 at 491.088 kb on + strand, within Echvi_0447 at 491.088 kb on + strand, within Echvi_0447 at 491.089 kb on - strand, within Echvi_0447 at 491.089 kb on - strand, within Echvi_0447 at 491.100 kb on + strand, within Echvi_0447 at 491.100 kb on + strand, within Echvi_0447 at 491.101 kb on - strand, within Echvi_0447 at 491.136 kb on + strand, within Echvi_0447 at 491.136 kb on + strand, within Echvi_0447 at 491.136 kb on + strand, within Echvi_0447 at 491.136 kb on + strand, within Echvi_0447 at 491.136 kb on + strand, within Echvi_0447 at 491.137 kb on - strand, within Echvi_0447 at 491.137 kb on - strand, within Echvi_0447 at 491.137 kb on - strand, within Echvi_0447 at 491.179 kb on + strand, within Echvi_0447 at 491.202 kb on + strand, within Echvi_0447 at 491.202 kb on + strand, within Echvi_0447 at 491.202 kb on + strand, within Echvi_0447 at 491.203 kb on - strand, within Echvi_0447 at 491.266 kb on - strand, within Echvi_0447 at 491.266 kb on - strand, within Echvi_0447 at 491.269 kb on + strand, within Echvi_0447 at 491.269 kb on + strand, within Echvi_0447 at 491.302 kb on + strand, within Echvi_0447 at 491.303 kb on - strand, within Echvi_0447 at 491.306 kb on - strand, within Echvi_0447 at 491.343 kb on + strand, within Echvi_0447 at 491.344 kb on - strand, within Echvi_0447 at 491.344 kb on - strand, within Echvi_0447 at 491.380 kb on + strand, within Echvi_0447 at 491.380 kb on + strand, within Echvi_0447 at 491.381 kb on - strand, within Echvi_0447 at 491.473 kb on + strand, within Echvi_0447 at 491.473 kb on + strand, within Echvi_0447 at 491.487 kb on + strand, within Echvi_0447 at 491.487 kb on + strand, within Echvi_0447 at 491.488 kb on - strand, within Echvi_0447 at 491.488 kb on - strand, within Echvi_0447 at 491.491 kb on + strand, within Echvi_0447 at 491.543 kb on - strand, within Echvi_0447 at 491.543 kb on - strand, within Echvi_0447 at 491.561 kb on + strand, within Echvi_0447 at 491.582 kb on - strand at 491.669 kb on + strand at 491.670 kb on - strand at 491.670 kb on - strand at 491.675 kb on - strand at 491.675 kb on - strand at 491.675 kb on - strand at 491.707 kb on - strand at 491.711 kb on + strand at 491.711 kb on + strand at 491.722 kb on + strand at 491.746 kb on + strand at 491.866 kb on - strand, within Echvi_0448 at 491.870 kb on - strand, within Echvi_0448 at 491.870 kb on - strand, within Echvi_0448 at 491.888 kb on + strand, within Echvi_0448 at 491.941 kb on + strand, within Echvi_0448 at 491.942 kb on - strand, within Echvi_0448 at 491.942 kb on - strand, within Echvi_0448 at 491.944 kb on - strand, within Echvi_0448 at 492.069 kb on + strand, within Echvi_0448 at 492.071 kb on + strand, within Echvi_0448 at 492.072 kb on - strand, within Echvi_0448 at 492.129 kb on + strand, within Echvi_0448 at 492.129 kb on + strand, within Echvi_0448 at 492.130 kb on - strand, within Echvi_0448 at 492.137 kb on + strand, within Echvi_0448 at 492.137 kb on + strand, within Echvi_0448 at 492.138 kb on - strand, within Echvi_0448 at 492.138 kb on - strand, within Echvi_0448 at 492.303 kb on + strand at 492.322 kb on + strand at 492.334 kb on + strand at 492.343 kb on + strand at 492.358 kb on - strand at 492.358 kb on - strand at 492.395 kb on + strand at 492.396 kb on - strand at 492.603 kb on - strand, within Echvi_0449 at 492.663 kb on + strand, within Echvi_0449 at 492.667 kb on + strand, within Echvi_0449 at 492.667 kb on + strand, within Echvi_0449 at 492.728 kb on + strand, within Echvi_0449 at 492.795 kb on + strand, within Echvi_0449 at 492.796 kb on - strand, within Echvi_0449 at 492.801 kb on + strand, within Echvi_0449 at 492.969 kb on + strand, within Echvi_0449 at 492.970 kb on - strand, within Echvi_0449 at 492.970 kb on - strand, within Echvi_0449 at 492.970 kb on - strand, within Echvi_0449 at 492.970 kb on - strand, within Echvi_0449 at 493.011 kb on + strand, within Echvi_0449 at 493.011 kb on + strand, within Echvi_0449 at 493.088 kb on + strand, within Echvi_0449 at 493.246 kb on + strand, within Echvi_0449 at 493.247 kb on - strand, within Echvi_0449
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.064 mg/ml remove 490,769 + Echvi_0447 0.30 -0.0 490,798 + Echvi_0447 0.32 -2.1 490,798 + Echvi_0447 0.32 -0.4 490,800 + Echvi_0447 0.32 +1.9 490,801 - Echvi_0447 0.32 -2.3 490,902 - Echvi_0447 0.40 -2.9 490,910 + Echvi_0447 0.40 -0.4 490,914 + Echvi_0447 0.41 +1.0 490,914 + Echvi_0447 0.41 -2.2 490,914 + Echvi_0447 0.41 -3.3 490,914 + Echvi_0447 0.41 -1.9 490,915 - Echvi_0447 0.41 +1.3 490,915 - Echvi_0447 0.41 -1.4 490,915 - Echvi_0447 0.41 +1.4 490,915 - Echvi_0447 0.41 +0.4 490,915 - Echvi_0447 0.41 +1.5 490,937 - Echvi_0447 0.42 -2.1 490,945 + Echvi_0447 0.43 -2.4 490,945 + Echvi_0447 0.43 +2.2 490,962 - Echvi_0447 0.44 -1.9 490,966 + Echvi_0447 0.45 +0.8 491,010 + Echvi_0447 0.48 +1.7 491,026 + Echvi_0447 0.49 -1.9 491,026 + Echvi_0447 0.49 -3.1 491,026 + Echvi_0447 0.49 +0.5 491,038 + Echvi_0447 0.50 -0.1 491,038 + Echvi_0447 0.50 +1.6 491,058 + Echvi_0447 0.52 -3.4 491,058 + Echvi_0447 0.52 -1.5 491,058 + Echvi_0447 0.52 +1.9 491,058 + Echvi_0447 0.52 +0.4 491,058 + Echvi_0447 0.52 +1.4 491,059 - Echvi_0447 0.52 -2.2 491,084 - Echvi_0447 0.54 +0.9 491,088 + Echvi_0447 0.54 -0.5 491,088 + Echvi_0447 0.54 +1.9 491,089 - Echvi_0447 0.54 +2.5 491,089 - Echvi_0447 0.54 +0.9 491,100 + Echvi_0447 0.55 +0.9 491,100 + Echvi_0447 0.55 -2.6 491,101 - Echvi_0447 0.55 -2.4 491,136 + Echvi_0447 0.58 +1.4 491,136 + Echvi_0447 0.58 +2.1 491,136 + Echvi_0447 0.58 +2.3 491,136 + Echvi_0447 0.58 +1.6 491,136 + Echvi_0447 0.58 -2.3 491,137 - Echvi_0447 0.58 +2.9 491,137 - Echvi_0447 0.58 +0.6 491,137 - Echvi_0447 0.58 +1.8 491,179 + Echvi_0447 0.61 -0.9 491,202 + Echvi_0447 0.63 +1.5 491,202 + Echvi_0447 0.63 +1.2 491,202 + Echvi_0447 0.63 +1.4 491,203 - Echvi_0447 0.63 -0.7 491,266 - Echvi_0447 0.67 +0.5 491,266 - Echvi_0447 0.67 +1.9 491,269 + Echvi_0447 0.68 -1.9 491,269 + Echvi_0447 0.68 -2.6 491,302 + Echvi_0447 0.70 -1.1 491,303 - Echvi_0447 0.70 -1.7 491,306 - Echvi_0447 0.70 +3.1 491,343 + Echvi_0447 0.73 -1.9 491,344 - Echvi_0447 0.73 +0.5 491,344 - Echvi_0447 0.73 -0.1 491,380 + Echvi_0447 0.76 +1.2 491,380 + Echvi_0447 0.76 -0.5 491,381 - Echvi_0447 0.76 +0.1 491,473 + Echvi_0447 0.83 +2.1 491,473 + Echvi_0447 0.83 +2.8 491,487 + Echvi_0447 0.84 +0.9 491,487 + Echvi_0447 0.84 +0.9 491,488 - Echvi_0447 0.84 -2.1 491,488 - Echvi_0447 0.84 -2.7 491,491 + Echvi_0447 0.84 -1.4 491,543 - Echvi_0447 0.88 +1.7 491,543 - Echvi_0447 0.88 -1.9 491,561 + Echvi_0447 0.90 -2.2 491,582 - +1.7 491,669 + -1.1 491,670 - -1.2 491,670 - -2.1 491,675 - -1.4 491,675 - -1.5 491,675 - -0.8 491,707 - -2.1 491,711 + -1.2 491,711 + -1.5 491,722 + -0.1 491,746 + -2.3 491,866 - Echvi_0448 0.29 -1.6 491,870 - Echvi_0448 0.29 +2.2 491,870 - Echvi_0448 0.29 -2.9 491,888 + Echvi_0448 0.33 -0.3 491,941 + Echvi_0448 0.42 +1.2 491,942 - Echvi_0448 0.42 +0.9 491,942 - Echvi_0448 0.42 -3.1 491,944 - Echvi_0448 0.43 +1.6 492,069 + Echvi_0448 0.66 +0.3 492,071 + Echvi_0448 0.66 -2.3 492,072 - Echvi_0448 0.66 -1.0 492,129 + Echvi_0448 0.77 -0.4 492,129 + Echvi_0448 0.77 -1.6 492,130 - Echvi_0448 0.77 -2.5 492,137 + Echvi_0448 0.78 +0.5 492,137 + Echvi_0448 0.78 -1.6 492,138 - Echvi_0448 0.78 -0.7 492,138 - Echvi_0448 0.78 -0.5 492,303 + -3.1 492,322 + -1.8 492,334 + -1.0 492,343 + +2.3 492,358 - +2.0 492,358 - -2.1 492,395 + -2.8 492,396 - +0.5 492,603 - Echvi_0449 0.22 +0.9 492,663 + Echvi_0449 0.27 -0.1 492,667 + Echvi_0449 0.27 -0.1 492,667 + Echvi_0449 0.27 -1.6 492,728 + Echvi_0449 0.33 -1.8 492,795 + Echvi_0449 0.39 +2.0 492,796 - Echvi_0449 0.39 -1.6 492,801 + Echvi_0449 0.39 -1.4 492,969 + Echvi_0449 0.54 -0.7 492,970 - Echvi_0449 0.54 -1.3 492,970 - Echvi_0449 0.54 +1.5 492,970 - Echvi_0449 0.54 +4.4 492,970 - Echvi_0449 0.54 -2.5 493,011 + Echvi_0449 0.58 +1.5 493,011 + Echvi_0449 0.58 +2.1 493,088 + Echvi_0449 0.65 -0.8 493,246 + Echvi_0449 0.79 -3.6 493,247 - Echvi_0449 0.79 -2.0
Or see this region's nucleotide sequence