Experiment: m.b. D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0395 and Echvi_0396 are separated by 360 nucleotides Echvi_0396 and Echvi_0397 are separated by 189 nucleotides
Echvi_0395: Echvi_0395 - DNA repair proteins, at 419,045 to 419,515
_0395
Echvi_0396: Echvi_0396 - Transcriptional regulators, at 419,876 to 420,922
_0396
Echvi_0397: Echvi_0397 - hypothetical protein, at 421,112 to 422,476
_0397
Position (kb) 419
420
421 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 418.931 kb on + strand at 418.935 kb on + strand at 418.935 kb on + strand at 418.936 kb on - strand at 418.943 kb on + strand at 418.944 kb on - strand at 419.067 kb on + strand at 419.067 kb on + strand at 419.067 kb on + strand at 419.096 kb on + strand, within Echvi_0395 at 419.096 kb on + strand, within Echvi_0395 at 419.183 kb on - strand, within Echvi_0395 at 419.224 kb on + strand, within Echvi_0395 at 419.665 kb on + strand at 419.693 kb on + strand at 419.701 kb on + strand at 419.720 kb on + strand at 419.721 kb on - strand at 419.722 kb on + strand at 419.723 kb on - strand at 419.723 kb on - strand at 419.723 kb on - strand at 419.723 kb on - strand at 419.723 kb on - strand at 419.726 kb on + strand at 419.726 kb on + strand at 419.726 kb on + strand at 419.731 kb on - strand at 419.731 kb on - strand at 419.736 kb on + strand at 419.749 kb on + strand at 419.759 kb on + strand at 419.806 kb on - strand at 419.827 kb on - strand at 419.829 kb on - strand at 419.829 kb on - strand at 419.850 kb on + strand at 419.851 kb on - strand at 419.882 kb on - strand at 419.882 kb on - strand at 419.882 kb on - strand at 419.882 kb on - strand at 419.882 kb on - strand at 419.914 kb on + strand at 420.020 kb on - strand, within Echvi_0396 at 420.025 kb on + strand, within Echvi_0396 at 420.028 kb on - strand, within Echvi_0396 at 420.036 kb on - strand, within Echvi_0396 at 420.036 kb on - strand, within Echvi_0396 at 420.042 kb on - strand, within Echvi_0396 at 420.042 kb on - strand, within Echvi_0396 at 420.042 kb on - strand, within Echvi_0396 at 420.042 kb on - strand, within Echvi_0396 at 420.047 kb on + strand, within Echvi_0396 at 420.085 kb on + strand, within Echvi_0396 at 420.086 kb on - strand, within Echvi_0396 at 420.120 kb on + strand, within Echvi_0396 at 420.137 kb on - strand, within Echvi_0396 at 420.231 kb on + strand, within Echvi_0396 at 420.232 kb on - strand, within Echvi_0396 at 420.235 kb on + strand, within Echvi_0396 at 420.236 kb on - strand, within Echvi_0396 at 420.236 kb on - strand, within Echvi_0396 at 420.257 kb on + strand, within Echvi_0396 at 420.257 kb on + strand, within Echvi_0396 at 420.259 kb on + strand, within Echvi_0396 at 420.259 kb on + strand, within Echvi_0396 at 420.259 kb on + strand, within Echvi_0396 at 420.259 kb on + strand, within Echvi_0396 at 420.259 kb on + strand, within Echvi_0396 at 420.259 kb on + strand, within Echvi_0396 at 420.259 kb on + strand, within Echvi_0396 at 420.259 kb on + strand, within Echvi_0396 at 420.259 kb on + strand, within Echvi_0396 at 420.259 kb on + strand, within Echvi_0396 at 420.259 kb on + strand, within Echvi_0396 at 420.259 kb on + strand, within Echvi_0396 at 420.259 kb on + strand, within Echvi_0396 at 420.259 kb on + strand, within Echvi_0396 at 420.259 kb on + strand, within Echvi_0396 at 420.259 kb on + strand, within Echvi_0396 at 420.259 kb on + strand, within Echvi_0396 at 420.259 kb on + strand, within Echvi_0396 at 420.260 kb on - strand, within Echvi_0396 at 420.260 kb on - strand, within Echvi_0396 at 420.260 kb on - strand, within Echvi_0396 at 420.260 kb on - strand, within Echvi_0396 at 420.260 kb on - strand, within Echvi_0396 at 420.260 kb on - strand, within Echvi_0396 at 420.260 kb on - strand, within Echvi_0396 at 420.319 kb on + strand, within Echvi_0396 at 420.340 kb on - strand, within Echvi_0396 at 420.362 kb on + strand, within Echvi_0396 at 420.447 kb on + strand, within Echvi_0396 at 420.460 kb on + strand, within Echvi_0396 at 420.473 kb on + strand, within Echvi_0396 at 420.473 kb on + strand, within Echvi_0396 at 420.480 kb on - strand, within Echvi_0396 at 420.480 kb on - strand, within Echvi_0396 at 420.480 kb on - strand, within Echvi_0396 at 420.481 kb on + strand, within Echvi_0396 at 420.492 kb on + strand, within Echvi_0396 at 420.492 kb on + strand, within Echvi_0396 at 420.492 kb on + strand, within Echvi_0396 at 420.493 kb on - strand, within Echvi_0396 at 420.493 kb on - strand, within Echvi_0396 at 420.493 kb on - strand, within Echvi_0396 at 420.493 kb on - strand, within Echvi_0396 at 420.493 kb on - strand, within Echvi_0396 at 420.499 kb on - strand, within Echvi_0396 at 420.529 kb on + strand, within Echvi_0396 at 420.530 kb on - strand, within Echvi_0396 at 420.530 kb on - strand, within Echvi_0396 at 420.530 kb on - strand, within Echvi_0396 at 420.534 kb on - strand, within Echvi_0396 at 420.534 kb on - strand, within Echvi_0396 at 420.535 kb on + strand, within Echvi_0396 at 420.536 kb on - strand, within Echvi_0396 at 420.573 kb on + strand, within Echvi_0396 at 420.573 kb on + strand, within Echvi_0396 at 420.574 kb on - strand, within Echvi_0396 at 420.574 kb on - strand, within Echvi_0396 at 420.574 kb on - strand, within Echvi_0396 at 420.574 kb on - strand, within Echvi_0396 at 420.604 kb on + strand, within Echvi_0396 at 420.621 kb on + strand, within Echvi_0396 at 420.622 kb on - strand, within Echvi_0396 at 420.630 kb on - strand, within Echvi_0396 at 420.630 kb on - strand, within Echvi_0396 at 420.641 kb on + strand, within Echvi_0396 at 420.645 kb on + strand, within Echvi_0396 at 420.650 kb on + strand, within Echvi_0396 at 420.668 kb on + strand, within Echvi_0396 at 420.690 kb on + strand, within Echvi_0396 at 420.691 kb on - strand, within Echvi_0396 at 420.691 kb on - strand, within Echvi_0396 at 420.693 kb on + strand, within Echvi_0396 at 420.719 kb on + strand, within Echvi_0396 at 420.742 kb on + strand, within Echvi_0396 at 420.743 kb on - strand, within Echvi_0396 at 420.743 kb on - strand, within Echvi_0396 at 420.744 kb on + strand, within Echvi_0396 at 420.744 kb on + strand, within Echvi_0396 at 420.744 kb on + strand, within Echvi_0396 at 420.770 kb on + strand, within Echvi_0396 at 420.774 kb on + strand, within Echvi_0396 at 420.775 kb on - strand, within Echvi_0396 at 420.775 kb on - strand, within Echvi_0396 at 420.775 kb on - strand, within Echvi_0396 at 420.775 kb on - strand, within Echvi_0396 at 420.775 kb on - strand, within Echvi_0396 at 420.776 kb on + strand, within Echvi_0396 at 420.776 kb on + strand, within Echvi_0396 at 420.776 kb on + strand, within Echvi_0396 at 420.777 kb on - strand, within Echvi_0396 at 420.777 kb on - strand, within Echvi_0396 at 420.777 kb on - strand, within Echvi_0396 at 420.824 kb on + strand at 420.842 kb on - strand at 420.863 kb on + strand at 420.863 kb on + strand at 420.874 kb on - strand at 420.874 kb on - strand at 420.943 kb on - strand at 420.949 kb on + strand at 421.060 kb on + strand at 421.072 kb on + strand at 421.207 kb on - strand at 421.245 kb on + strand at 421.246 kb on - strand at 421.275 kb on - strand, within Echvi_0397 at 421.322 kb on - strand, within Echvi_0397 at 421.485 kb on + strand, within Echvi_0397 at 421.557 kb on + strand, within Echvi_0397 at 421.561 kb on + strand, within Echvi_0397 at 421.583 kb on + strand, within Echvi_0397 at 421.583 kb on + strand, within Echvi_0397 at 421.584 kb on - strand, within Echvi_0397 at 421.593 kb on + strand, within Echvi_0397 at 421.594 kb on - strand, within Echvi_0397 at 421.608 kb on - strand, within Echvi_0397 at 421.668 kb on + strand, within Echvi_0397 at 421.668 kb on + strand, within Echvi_0397 at 421.668 kb on + strand, within Echvi_0397 at 421.669 kb on - strand, within Echvi_0397 at 421.669 kb on - strand, within Echvi_0397 at 421.691 kb on - strand, within Echvi_0397 at 421.736 kb on + strand, within Echvi_0397 at 421.772 kb on - strand, within Echvi_0397 at 421.772 kb on - strand, within Echvi_0397 at 421.772 kb on - strand, within Echvi_0397 at 421.772 kb on - strand, within Echvi_0397 at 421.838 kb on + strand, within Echvi_0397 at 421.901 kb on + strand, within Echvi_0397 at 421.901 kb on + strand, within Echvi_0397
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.064 mg/ml remove 418,931 + +3.6 418,935 + +2.1 418,935 + +0.4 418,936 - -1.3 418,943 + -1.5 418,944 - -2.3 419,067 + +0.6 419,067 + +0.3 419,067 + +0.4 419,096 + Echvi_0395 0.11 +1.0 419,096 + Echvi_0395 0.11 +2.5 419,183 - Echvi_0395 0.29 +0.3 419,224 + Echvi_0395 0.38 +0.2 419,665 + -0.9 419,693 + -1.6 419,701 + +1.1 419,720 + +2.1 419,721 - -1.1 419,722 + +2.1 419,723 - -1.4 419,723 - +0.5 419,723 - -1.3 419,723 - +1.6 419,723 - -3.1 419,726 + +0.8 419,726 + +0.8 419,726 + +1.4 419,731 - -1.8 419,731 - -1.3 419,736 + +1.5 419,749 + +1.0 419,759 + +1.1 419,806 - -1.2 419,827 - -2.0 419,829 - +1.0 419,829 - -1.4 419,850 + +4.4 419,851 - -2.7 419,882 - +0.9 419,882 - -2.7 419,882 - +0.6 419,882 - -2.4 419,882 - -1.1 419,914 + +0.9 420,020 - Echvi_0396 0.14 +2.2 420,025 + Echvi_0396 0.14 -2.9 420,028 - Echvi_0396 0.15 +1.8 420,036 - Echvi_0396 0.15 +1.5 420,036 - Echvi_0396 0.15 -1.4 420,042 - Echvi_0396 0.16 -2.0 420,042 - Echvi_0396 0.16 +0.8 420,042 - Echvi_0396 0.16 -0.1 420,042 - Echvi_0396 0.16 -0.6 420,047 + Echvi_0396 0.16 +0.9 420,085 + Echvi_0396 0.20 -1.0 420,086 - Echvi_0396 0.20 +1.9 420,120 + Echvi_0396 0.23 +1.3 420,137 - Echvi_0396 0.25 +0.7 420,231 + Echvi_0396 0.34 -1.9 420,232 - Echvi_0396 0.34 -1.8 420,235 + Echvi_0396 0.34 +1.4 420,236 - Echvi_0396 0.34 +0.9 420,236 - Echvi_0396 0.34 +0.4 420,257 + Echvi_0396 0.36 +3.1 420,257 + Echvi_0396 0.36 -1.4 420,259 + Echvi_0396 0.37 -2.4 420,259 + Echvi_0396 0.37 +0.9 420,259 + Echvi_0396 0.37 -0.7 420,259 + Echvi_0396 0.37 +3.2 420,259 + Echvi_0396 0.37 +2.6 420,259 + Echvi_0396 0.37 -2.0 420,259 + Echvi_0396 0.37 +1.3 420,259 + Echvi_0396 0.37 -0.9 420,259 + Echvi_0396 0.37 +0.5 420,259 + Echvi_0396 0.37 +0.8 420,259 + Echvi_0396 0.37 +0.2 420,259 + Echvi_0396 0.37 -2.9 420,259 + Echvi_0396 0.37 +0.4 420,259 + Echvi_0396 0.37 +0.8 420,259 + Echvi_0396 0.37 +0.9 420,259 + Echvi_0396 0.37 +0.8 420,259 + Echvi_0396 0.37 +1.8 420,259 + Echvi_0396 0.37 +0.9 420,260 - Echvi_0396 0.37 +2.8 420,260 - Echvi_0396 0.37 +0.5 420,260 - Echvi_0396 0.37 -2.6 420,260 - Echvi_0396 0.37 +1.2 420,260 - Echvi_0396 0.37 -1.0 420,260 - Echvi_0396 0.37 +2.1 420,260 - Echvi_0396 0.37 +0.8 420,319 + Echvi_0396 0.42 -0.0 420,340 - Echvi_0396 0.44 +0.2 420,362 + Echvi_0396 0.46 +2.8 420,447 + Echvi_0396 0.55 +1.5 420,460 + Echvi_0396 0.56 -3.6 420,473 + Echvi_0396 0.57 +3.1 420,473 + Echvi_0396 0.57 -0.1 420,480 - Echvi_0396 0.58 +0.7 420,480 - Echvi_0396 0.58 -0.7 420,480 - Echvi_0396 0.58 -1.3 420,481 + Echvi_0396 0.58 +1.0 420,492 + Echvi_0396 0.59 -0.5 420,492 + Echvi_0396 0.59 +0.6 420,492 + Echvi_0396 0.59 -3.4 420,493 - Echvi_0396 0.59 -3.4 420,493 - Echvi_0396 0.59 +1.9 420,493 - Echvi_0396 0.59 +0.4 420,493 - Echvi_0396 0.59 -1.8 420,493 - Echvi_0396 0.59 -0.0 420,499 - Echvi_0396 0.60 +2.5 420,529 + Echvi_0396 0.62 +0.2 420,530 - Echvi_0396 0.62 -0.8 420,530 - Echvi_0396 0.62 +2.5 420,530 - Echvi_0396 0.62 +0.4 420,534 - Echvi_0396 0.63 -0.7 420,534 - Echvi_0396 0.63 +3.4 420,535 + Echvi_0396 0.63 -0.5 420,536 - Echvi_0396 0.63 +2.7 420,573 + Echvi_0396 0.67 -1.9 420,573 + Echvi_0396 0.67 +0.0 420,574 - Echvi_0396 0.67 -1.0 420,574 - Echvi_0396 0.67 -3.2 420,574 - Echvi_0396 0.67 +1.5 420,574 - Echvi_0396 0.67 -2.3 420,604 + Echvi_0396 0.70 -2.1 420,621 + Echvi_0396 0.71 -2.2 420,622 - Echvi_0396 0.71 +0.5 420,630 - Echvi_0396 0.72 +0.6 420,630 - Echvi_0396 0.72 -0.3 420,641 + Echvi_0396 0.73 -1.6 420,645 + Echvi_0396 0.73 -2.0 420,650 + Echvi_0396 0.74 +0.8 420,668 + Echvi_0396 0.76 -0.2 420,690 + Echvi_0396 0.78 -2.5 420,691 - Echvi_0396 0.78 +1.5 420,691 - Echvi_0396 0.78 -0.3 420,693 + Echvi_0396 0.78 -0.5 420,719 + Echvi_0396 0.81 -0.5 420,742 + Echvi_0396 0.83 +0.2 420,743 - Echvi_0396 0.83 -0.7 420,743 - Echvi_0396 0.83 -1.6 420,744 + Echvi_0396 0.83 +0.5 420,744 + Echvi_0396 0.83 +0.6 420,744 + Echvi_0396 0.83 -0.0 420,770 + Echvi_0396 0.85 -1.7 420,774 + Echvi_0396 0.86 +0.0 420,775 - Echvi_0396 0.86 -0.8 420,775 - Echvi_0396 0.86 -0.8 420,775 - Echvi_0396 0.86 -2.9 420,775 - Echvi_0396 0.86 -1.1 420,775 - Echvi_0396 0.86 +0.9 420,776 + Echvi_0396 0.86 -0.2 420,776 + Echvi_0396 0.86 +0.6 420,776 + Echvi_0396 0.86 -2.0 420,777 - Echvi_0396 0.86 +1.6 420,777 - Echvi_0396 0.86 +2.3 420,777 - Echvi_0396 0.86 +0.2 420,824 + -1.9 420,842 - +2.4 420,863 + +2.8 420,863 + +2.4 420,874 - -0.8 420,874 - +1.5 420,943 - -3.8 420,949 + -0.1 421,060 + -1.0 421,072 + +1.0 421,207 - +1.9 421,245 + +0.2 421,246 - -0.7 421,275 - Echvi_0397 0.12 -1.3 421,322 - Echvi_0397 0.15 +1.2 421,485 + Echvi_0397 0.27 -1.2 421,557 + Echvi_0397 0.33 -2.2 421,561 + Echvi_0397 0.33 +1.5 421,583 + Echvi_0397 0.35 +0.2 421,583 + Echvi_0397 0.35 -1.0 421,584 - Echvi_0397 0.35 +0.9 421,593 + Echvi_0397 0.35 +2.0 421,594 - Echvi_0397 0.35 -2.2 421,608 - Echvi_0397 0.36 -3.0 421,668 + Echvi_0397 0.41 -1.9 421,668 + Echvi_0397 0.41 +0.8 421,668 + Echvi_0397 0.41 -1.5 421,669 - Echvi_0397 0.41 -0.8 421,669 - Echvi_0397 0.41 -0.3 421,691 - Echvi_0397 0.42 -2.5 421,736 + Echvi_0397 0.46 -0.9 421,772 - Echvi_0397 0.48 +0.3 421,772 - Echvi_0397 0.48 +0.2 421,772 - Echvi_0397 0.48 +0.9 421,772 - Echvi_0397 0.48 +0.9 421,838 + Echvi_0397 0.53 +4.1 421,901 + Echvi_0397 0.58 +0.9 421,901 + Echvi_0397 0.58 -2.4
Or see this region's nucleotide sequence