Experiment: m.b. D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0360 and Echvi_0361 are separated by 30 nucleotides Echvi_0361 and Echvi_0362 are separated by 297 nucleotides Echvi_0362 and Echvi_0363 are separated by 10 nucleotides
Echvi_0360: Echvi_0360 - hypothetical protein, at 387,368 to 388,405
_0360
Echvi_0361: Echvi_0361 - hypothetical protein, at 388,436 to 389,359
_0361
Echvi_0362: Echvi_0362 - hypothetical protein, at 389,657 to 390,136
_0362
Echvi_0363: Echvi_0363 - Flavodoxin reductases (ferredoxin-NADPH reductases) family 1, at 390,147 to 391,259
_0363
Position (kb) 388
389
390 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5 at 387.608 kb on - strand, within Echvi_0360 at 388.193 kb on + strand, within Echvi_0360 at 388.456 kb on + strand at 388.456 kb on + strand at 388.459 kb on + strand at 388.459 kb on + strand at 388.459 kb on + strand at 388.460 kb on - strand at 388.543 kb on + strand, within Echvi_0361 at 388.543 kb on + strand, within Echvi_0361 at 388.617 kb on + strand, within Echvi_0361 at 388.618 kb on - strand, within Echvi_0361 at 388.742 kb on + strand, within Echvi_0361 at 388.742 kb on + strand, within Echvi_0361 at 388.742 kb on + strand, within Echvi_0361 at 388.742 kb on + strand, within Echvi_0361 at 388.742 kb on + strand, within Echvi_0361 at 388.742 kb on + strand, within Echvi_0361 at 388.742 kb on + strand, within Echvi_0361 at 388.743 kb on - strand, within Echvi_0361 at 388.746 kb on + strand, within Echvi_0361 at 388.747 kb on - strand, within Echvi_0361 at 388.747 kb on - strand, within Echvi_0361 at 388.747 kb on - strand, within Echvi_0361 at 388.754 kb on - strand, within Echvi_0361 at 388.820 kb on - strand, within Echvi_0361 at 388.840 kb on - strand, within Echvi_0361 at 389.049 kb on + strand, within Echvi_0361 at 389.050 kb on - strand, within Echvi_0361 at 389.054 kb on - strand, within Echvi_0361 at 389.101 kb on - strand, within Echvi_0361 at 389.131 kb on - strand, within Echvi_0361 at 389.170 kb on + strand, within Echvi_0361 at 389.222 kb on + strand, within Echvi_0361 at 389.223 kb on - strand, within Echvi_0361 at 389.223 kb on - strand, within Echvi_0361 at 389.224 kb on + strand, within Echvi_0361 at 389.224 kb on + strand, within Echvi_0361 at 389.224 kb on + strand, within Echvi_0361 at 389.224 kb on + strand, within Echvi_0361 at 389.225 kb on - strand, within Echvi_0361 at 389.225 kb on - strand, within Echvi_0361 at 389.312 kb on + strand at 389.314 kb on + strand at 389.314 kb on + strand at 389.315 kb on - strand at 389.315 kb on - strand at 389.315 kb on - strand at 389.315 kb on - strand at 389.358 kb on - strand at 389.388 kb on - strand at 389.418 kb on + strand at 389.465 kb on - strand at 389.564 kb on + strand at 389.575 kb on - strand at 389.685 kb on - strand at 389.695 kb on + strand at 389.695 kb on + strand at 389.708 kb on - strand, within Echvi_0362 at 389.717 kb on + strand, within Echvi_0362 at 389.828 kb on + strand, within Echvi_0362 at 389.942 kb on - strand, within Echvi_0362 at 389.952 kb on + strand, within Echvi_0362 at 389.952 kb on + strand, within Echvi_0362 at 389.953 kb on - strand, within Echvi_0362 at 389.966 kb on + strand, within Echvi_0362 at 390.046 kb on + strand, within Echvi_0362 at 390.107 kb on - strand at 390.155 kb on + strand at 390.179 kb on + strand at 390.179 kb on + strand at 390.184 kb on + strand at 390.206 kb on - strand at 390.206 kb on - strand at 390.313 kb on + strand, within Echvi_0363
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.064 mg/ml remove 387,608 - Echvi_0360 0.23 +1.1 388,193 + Echvi_0360 0.79 +1.5 388,456 + -1.5 388,456 + -3.3 388,459 + +1.3 388,459 + -2.1 388,459 + +3.3 388,460 - -1.5 388,543 + Echvi_0361 0.12 -2.0 388,543 + Echvi_0361 0.12 -0.7 388,617 + Echvi_0361 0.20 +1.5 388,618 - Echvi_0361 0.20 -0.1 388,742 + Echvi_0361 0.33 -2.1 388,742 + Echvi_0361 0.33 -0.1 388,742 + Echvi_0361 0.33 +0.5 388,742 + Echvi_0361 0.33 -1.6 388,742 + Echvi_0361 0.33 -0.7 388,742 + Echvi_0361 0.33 -2.1 388,742 + Echvi_0361 0.33 -1.1 388,743 - Echvi_0361 0.33 -3.6 388,746 + Echvi_0361 0.34 -2.8 388,747 - Echvi_0361 0.34 -0.2 388,747 - Echvi_0361 0.34 -0.3 388,747 - Echvi_0361 0.34 -0.3 388,754 - Echvi_0361 0.34 +1.7 388,820 - Echvi_0361 0.42 -1.5 388,840 - Echvi_0361 0.44 +0.7 389,049 + Echvi_0361 0.66 -1.0 389,050 - Echvi_0361 0.66 +1.4 389,054 - Echvi_0361 0.67 -3.1 389,101 - Echvi_0361 0.72 -1.0 389,131 - Echvi_0361 0.75 -1.8 389,170 + Echvi_0361 0.79 +1.1 389,222 + Echvi_0361 0.85 -3.9 389,223 - Echvi_0361 0.85 -0.9 389,223 - Echvi_0361 0.85 -1.1 389,224 + Echvi_0361 0.85 -0.6 389,224 + Echvi_0361 0.85 -2.5 389,224 + Echvi_0361 0.85 +0.3 389,224 + Echvi_0361 0.85 +1.0 389,225 - Echvi_0361 0.85 +0.3 389,225 - Echvi_0361 0.85 +0.8 389,312 + +0.7 389,314 + +0.9 389,314 + +0.5 389,315 - -2.6 389,315 - -0.0 389,315 - +0.0 389,315 - -2.3 389,358 - -3.3 389,388 - -3.1 389,418 + -1.0 389,465 - +1.8 389,564 + +0.9 389,575 - -1.6 389,685 - -2.4 389,695 + +2.3 389,695 + -2.4 389,708 - Echvi_0362 0.11 -1.0 389,717 + Echvi_0362 0.12 +1.0 389,828 + Echvi_0362 0.36 +1.6 389,942 - Echvi_0362 0.59 -2.6 389,952 + Echvi_0362 0.61 +0.5 389,952 + Echvi_0362 0.61 -1.6 389,953 - Echvi_0362 0.62 -0.4 389,966 + Echvi_0362 0.64 -2.3 390,046 + Echvi_0362 0.81 +2.1 390,107 - +0.3 390,155 + +4.5 390,179 + +5.4 390,179 + +4.5 390,184 + +5.0 390,206 - +4.7 390,206 - +5.0 390,313 + Echvi_0363 0.15 +4.0
Or see this region's nucleotide sequence