Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0335

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
356,388	+		Echvi_0334	0.83	+2.0
356,389	-		Echvi_0334	0.83	+3.2
356,394	+		Echvi_0334	0.83	-0.7
356,447	+		Echvi_0334	0.84	+0.7
356,447	+		Echvi_0334	0.84	+1.7
356,448	-		Echvi_0334	0.84	+2.5
356,482	+		Echvi_0334	0.85	+1.1
356,483	-		Echvi_0334	0.85	+3.0
356,483	-		Echvi_0334	0.85	+0.7
356,521	+		Echvi_0334	0.85	+2.8
356,609	+		Echvi_0334	0.87	+0.4
356,645	+		Echvi_0334	0.87	+1.1
356,646	-		Echvi_0334	0.87	-1.2
356,646	-		Echvi_0334	0.87	+1.1
356,646	-		Echvi_0334	0.87	+0.1
356,648	-		Echvi_0334	0.88	+0.5
356,648	-		Echvi_0334	0.88	-0.1
356,648	-		Echvi_0334	0.88	-2.5
356,648	-		Echvi_0334	0.88	+0.4
356,684	+		Echvi_0334	0.88	+1.3
356,685	-		Echvi_0334	0.88	+0.1
356,853	+				-0.8
356,854	-				-1.4
356,916	+				-0.3
356,917	-				-1.6
356,985	+				-0.6
356,985	+				+1.4
356,986	-				+0.8
356,986	-				-1.8
356,986	-				+0.1
356,986	-				-0.8
357,040	+				+1.0
357,040	+				-0.7
357,041	-				-1.3
357,041	-				+2.1
357,041	-				-0.1
357,043	+				+0.1
357,043	+				-3.1
357,044	-				-0.8
357,044	-				-0.6
357,044	-				+1.1
357,117	+				-0.4
357,117	+				-2.7
357,117	+				-2.7
357,117	+				-1.8
357,117	+				-2.3
357,118	-				-2.3
357,156	+				+0.1
357,280	+				-0.1
357,284	+				+0.9
357,284	+				+1.2
357,284	+				+0.7
357,285	-				-1.3
357,285	-				-2.2
357,285	-				-2.8
357,285	-				-1.3
357,285	-				-0.1
357,333	-				+0.6
357,340	+				+0.6
357,340	+				-0.7
357,340	+				-0.3
357,343	+				-0.1
357,348	+				-2.2
357,349	-				-2.3
357,352	+				-2.1
357,394	+				-1.9
357,395	-				+1.9
357,395	-				-1.5
357,397	+				-0.6
357,398	-				-1.3
357,511	+		Echvi_0335	0.21	-3.8
357,512	-		Echvi_0335	0.21	-1.6
357,515	-		Echvi_0335	0.22	-2.4
357,539	+		Echvi_0335	0.25	-1.6
357,636	-		Echvi_0335	0.38	-0.6
357,729	-		Echvi_0335	0.50	-1.0
357,941	+		Echvi_0335	0.78	-2.9
357,993	-		Echvi_0335	0.85	+1.7
357,993	-		Echvi_0335	0.85	-3.0
357,994	+		Echvi_0335	0.85	-0.1
357,994	+		Echvi_0335	0.85	-0.5
357,995	-		Echvi_0335	0.85	-2.5
358,036	-				-0.8
358,036	-				-1.4
358,036	-				-2.5
358,169	+				+0.2
358,193	+				+1.1
358,204	+				-0.6
358,222	+				-0.9
358,222	+				-0.7
358,222	+				+0.5
358,260	-				-2.7
358,262	-				-0.3
358,275	+				-2.2
358,276	-				+2.0
358,276	-				+0.1
358,368	-		Echvi_0336	0.29	-0.9
358,615	-				-1.2
358,615	-				-0.1
358,620	-				+1.4
358,727	+				-1.5