Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0315

Experiment: m.b. D-Cycloserine 0.064 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_0314 and Echvi_0315 overlap by 1 nucleotidesEchvi_0315 and Echvi_0316 overlap by 4 nucleotidesEchvi_0316 and Echvi_0317 are separated by 2 nucleotides Echvi_0314: Echvi_0314 - UDP-N-acetylmuramyl-tripeptide synthetase, at 326,692 to 328,155 _0314 Echvi_0315: Echvi_0315 - Cell division protein FtsI/penicillin-binding protein 2, at 328,155 to 330,266 _0315 Echvi_0316: Echvi_0316 - hypothetical protein, at 330,263 to 330,664 _0316 Echvi_0317: Echvi_0317 - S-adenosyl-methyltransferase MraW, at 330,667 to 331,575 _0317 Position (kb) 328 329 330 331Strain fitness (log2 ratio) -2 -1 0 1 2at 328.244 kb on - strandat 328.277 kb on - strandat 328.277 kb on - strandat 328.277 kb on - strandat 328.277 kb on - strandat 328.277 kb on - strandat 330.276 kb on - strandat 330.276 kb on - strandat 330.671 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.064 mg/ml
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328,244 - -1.9
328,277 - +0.8
328,277 - -1.0
328,277 - +0.8
328,277 - +2.4
328,277 - -2.7
330,276 - +0.1
330,276 - -0.7
330,671 - +0.9

Or see this region's nucleotide sequence