Experiment: m.b. D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0189 and Echvi_0190 are separated by 100 nucleotides Echvi_0190 and Echvi_0191 are separated by 29 nucleotides Echvi_0191 and Echvi_0192 are separated by 322 nucleotides
Echvi_0189: Echvi_0189 - translation elongation factor P, at 206,324 to 206,887
_0189
Echvi_0190: Echvi_0190 - acetyl-CoA carboxylase, biotin carboxyl carrier protein, at 206,988 to 207,473
_0190
Echvi_0191: Echvi_0191 - acetyl-CoA carboxylase, biotin carboxylase subunit, at 207,503 to 208,852
_0191
Echvi_0192: Echvi_0192 - hypothetical protein, at 209,175 to 209,792
_0192
Position (kb) 207
208
209 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 206.916 kb on + strand at 206.920 kb on + strand at 206.926 kb on + strand at 208.818 kb on + strand at 208.872 kb on + strand at 208.873 kb on - strand at 208.878 kb on - strand at 208.903 kb on - strand at 208.903 kb on - strand at 208.991 kb on - strand at 208.991 kb on - strand at 209.002 kb on - strand at 209.048 kb on + strand at 209.109 kb on - strand at 209.109 kb on - strand at 209.165 kb on + strand at 209.176 kb on + strand at 209.224 kb on + strand at 209.251 kb on + strand, within Echvi_0192 at 209.252 kb on - strand, within Echvi_0192 at 209.274 kb on - strand, within Echvi_0192 at 209.274 kb on - strand, within Echvi_0192 at 209.287 kb on - strand, within Echvi_0192 at 209.294 kb on + strand, within Echvi_0192 at 209.344 kb on + strand, within Echvi_0192 at 209.383 kb on + strand, within Echvi_0192 at 209.390 kb on + strand, within Echvi_0192 at 209.400 kb on + strand, within Echvi_0192 at 209.400 kb on + strand, within Echvi_0192 at 209.401 kb on - strand, within Echvi_0192 at 209.412 kb on + strand, within Echvi_0192 at 209.418 kb on - strand, within Echvi_0192 at 209.448 kb on + strand, within Echvi_0192 at 209.528 kb on - strand, within Echvi_0192 at 209.594 kb on + strand, within Echvi_0192 at 209.637 kb on - strand, within Echvi_0192 at 209.640 kb on + strand, within Echvi_0192 at 209.640 kb on + strand, within Echvi_0192 at 209.640 kb on + strand, within Echvi_0192 at 209.731 kb on - strand at 209.772 kb on - strand at 209.778 kb on - strand at 209.778 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.064 mg/ml remove 206,916 + -0.9 206,920 + -2.0 206,926 + -0.2 208,818 + +0.1 208,872 + -2.1 208,873 - +0.4 208,878 - -1.2 208,903 - +0.1 208,903 - +1.9 208,991 - -0.6 208,991 - -0.3 209,002 - -2.2 209,048 + -0.9 209,109 - +0.3 209,109 - +2.5 209,165 + -2.6 209,176 + -0.6 209,224 + +1.5 209,251 + Echvi_0192 0.12 +0.2 209,252 - Echvi_0192 0.12 +0.8 209,274 - Echvi_0192 0.16 +0.3 209,274 - Echvi_0192 0.16 +0.9 209,287 - Echvi_0192 0.18 +0.9 209,294 + Echvi_0192 0.19 -1.7 209,344 + Echvi_0192 0.27 -1.2 209,383 + Echvi_0192 0.34 -1.1 209,390 + Echvi_0192 0.35 +3.1 209,400 + Echvi_0192 0.36 -1.8 209,400 + Echvi_0192 0.36 -0.3 209,401 - Echvi_0192 0.37 -3.0 209,412 + Echvi_0192 0.38 -1.0 209,418 - Echvi_0192 0.39 -1.1 209,448 + Echvi_0192 0.44 -2.5 209,528 - Echvi_0192 0.57 -0.8 209,594 + Echvi_0192 0.68 -1.4 209,637 - Echvi_0192 0.75 +0.8 209,640 + Echvi_0192 0.75 +1.9 209,640 + Echvi_0192 0.75 +2.6 209,640 + Echvi_0192 0.75 -2.8 209,731 - +1.5 209,772 - +2.6 209,778 - -1.3 209,778 - -0.2
Or see this region's nucleotide sequence