Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0153

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
154,624	+				+1.5
154,624	+				+0.1
154,628	-				-1.3
154,632	+				-2.5
154,646	+				-0.6
154,667	+				-2.2
154,721	+				-0.6
154,722	-				-1.1
154,750	+				-0.9
154,813	+				-3.3
154,875	+		Echvi_0153	0.12	-1.6
154,876	-		Echvi_0153	0.12	-2.1
154,876	-		Echvi_0153	0.12	+0.4
155,197	+		Echvi_0153	0.34	+1.9
155,203	+		Echvi_0153	0.35	+0.4
155,222	-		Echvi_0153	0.36	-1.3
155,229	+		Echvi_0153	0.37	-0.9
155,446	+		Echvi_0153	0.52	+2.2
155,471	+		Echvi_0153	0.54	+0.7
155,471	+		Echvi_0153	0.54	-0.9
155,471	+		Echvi_0153	0.54	+2.0
155,471	+		Echvi_0153	0.54	+1.8
155,471	+		Echvi_0153	0.54	+1.2
155,471	+		Echvi_0153	0.54	-0.2
155,471	+		Echvi_0153	0.54	-1.4
155,472	-		Echvi_0153	0.54	+0.8
155,472	-		Echvi_0153	0.54	-0.3
155,473	+		Echvi_0153	0.54	-1.3
155,474	-		Echvi_0153	0.54	-0.4
155,475	+		Echvi_0153	0.54	+0.4
155,475	+		Echvi_0153	0.54	+0.4
155,475	+		Echvi_0153	0.54	+1.2
155,475	+		Echvi_0153	0.54	+2.1
155,475	+		Echvi_0153	0.54	-2.4
155,476	-		Echvi_0153	0.54	-1.2
155,525	-		Echvi_0153	0.58	+1.1
155,665	+		Echvi_0153	0.67	-0.5
155,683	-		Echvi_0153	0.69	+0.6
155,722	+		Echvi_0153	0.71	+0.3
155,726	+		Echvi_0153	0.72	+3.3
155,726	+		Echvi_0153	0.72	+2.3
155,726	+		Echvi_0153	0.72	-1.3
155,726	+		Echvi_0153	0.72	-0.8
155,727	-		Echvi_0153	0.72	+0.1
155,727	-		Echvi_0153	0.72	+1.7
155,769	+		Echvi_0153	0.75	+2.0
155,788	+		Echvi_0153	0.76	-0.3
155,789	-		Echvi_0153	0.76	-0.4
155,825	+		Echvi_0153	0.79	+1.7
155,946	-		Echvi_0153	0.87	+0.4
155,946	-		Echvi_0153	0.87	-2.3
155,959	+		Echvi_0153	0.88	+1.0
155,980	+		Echvi_0153	0.90	-1.6
155,980	+		Echvi_0153	0.90	-0.9
155,980	+		Echvi_0153	0.90	-0.6
156,016	+				-1.2
156,056	-				-1.1
156,065	+				+0.3
156,065	+				+4.7
156,115	+				-0.7
156,125	-				+2.1
156,147	+				-0.3
156,147	+				+3.2
156,147	+				+1.1
156,148	-				+1.7
156,148	-				+1.4
156,148	-				+1.2
156,148	-				-0.2
156,218	+				+0.1
156,224	-				+0.0
156,293	-		Echvi_0154	0.11	-1.1
156,398	+		Echvi_0154	0.22	-0.6
156,399	-		Echvi_0154	0.22	-2.3
156,399	-		Echvi_0154	0.22	-2.6
156,417	-		Echvi_0154	0.24	-0.5
156,427	-		Echvi_0154	0.25	-2.4
156,436	+		Echvi_0154	0.26	-0.7
156,436	+		Echvi_0154	0.26	-1.8
156,436	+		Echvi_0154	0.26	+3.1
156,464	-		Echvi_0154	0.28	-0.2
156,512	+		Echvi_0154	0.33	+0.1
156,516	+		Echvi_0154	0.34	-2.3
156,516	+		Echvi_0154	0.34	-1.2
156,517	-		Echvi_0154	0.34	+2.4
156,584	-		Echvi_0154	0.41	-0.9
156,635	+		Echvi_0154	0.46	+0.5
156,636	-		Echvi_0154	0.46	-2.1
156,663	+		Echvi_0154	0.49	+1.6
156,663	+				+0.4
156,669	-		Echvi_0154	0.49	+0.2
156,669	-		Echvi_0154	0.49	-0.9
156,684	+		Echvi_0154	0.51	-0.6
156,689	+		Echvi_0154	0.51	+3.8
156,690	-		Echvi_0154	0.51	-2.7
156,984	+		Echvi_0154	0.81	+0.4