Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0105

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
101,021	+				-1.2
101,021	+				-1.3
101,060	+				+0.1
101,122	+		Echvi_0103	0.21	+1.2
101,218	-		Echvi_0103	0.39	-2.8
101,237	-		Echvi_0103	0.43	+0.9
101,237	-		Echvi_0103	0.43	-2.0
101,295	+		Echvi_0103	0.54	+1.7
101,295	+		Echvi_0103	0.54	-0.9
101,306	-		Echvi_0103	0.56	-0.5
101,306	-		Echvi_0103	0.56	+0.7
101,309	+		Echvi_0103	0.57	+1.4
101,321	+		Echvi_0103	0.59	-1.3
101,321	+		Echvi_0103	0.59	+2.0
101,326	+		Echvi_0103	0.60	+3.8
101,336	-		Echvi_0103	0.62	+0.8
101,469	+		Echvi_0103	0.88	+2.7
101,469	+		Echvi_0103	0.88	+0.7
101,469	+		Echvi_0103	0.88	+1.3
101,470	-		Echvi_0103	0.88	+0.4
101,470	-		Echvi_0103	0.88	-1.2
101,470	-		Echvi_0103	0.88	-2.7
101,478	+		Echvi_0103	0.89	+1.3
101,536	-				-2.1
101,538	+				-2.3
101,559	+				+1.3
101,587	+				+1.5
101,588	-				-0.2
101,629	+				-2.6
101,652	+				+0.4
101,652	+				+0.5
101,653	-				+1.3
101,700	+		Echvi_0104	0.19	+0.7
101,701	-		Echvi_0104	0.20	-0.2
101,739	-		Echvi_0104	0.31	-1.1
101,973	+				+3.5
101,973	+				-1.4
101,973	+				-2.4
101,974	-				-0.8
102,152	+		Echvi_0105	0.35	+2.6
102,153	-		Echvi_0105	0.35	+0.4
102,153	-		Echvi_0105	0.35	+1.6
102,229	+		Echvi_0105	0.50	+0.4
102,229	+		Echvi_0105	0.50	+2.9
102,230	-		Echvi_0105	0.50	+3.4
102,230	-		Echvi_0105	0.50	+3.9
102,231	+		Echvi_0105	0.51	+2.3
102,231	+		Echvi_0105	0.51	+0.9
102,232	-		Echvi_0105	0.51	+1.9
102,267	-		Echvi_0105	0.58	+1.0
102,361	+		Echvi_0105	0.77	-1.9
102,362	-		Echvi_0105	0.77	+1.3
102,455	+				-0.9
102,455	+				+1.6
102,456	-				+2.2
102,456	-				-0.2
102,458	-				+1.1
102,476	-				-0.1
102,501	-				-2.0
102,522	+				-0.1
102,524	+				+0.6
102,601	+		Echvi_0106	0.17	+1.5
102,688	-		Echvi_0106	0.36	-2.6
102,688	-		Echvi_0106	0.36	-0.8
102,688	-		Echvi_0106	0.36	+1.8
102,691	+		Echvi_0106	0.37	-1.9
102,691	+		Echvi_0106	0.37	-0.4
102,692	-		Echvi_0106	0.37	-0.8
102,919	+		Echvi_0106	0.86	+0.9
102,920	-		Echvi_0106	0.86	-1.3
102,920	-		Echvi_0106	0.86	+2.8
102,920	-		Echvi_0106	0.86	+0.5
102,921	+		Echvi_0106	0.87	-0.8
102,921	+		Echvi_0106	0.87	+0.6
102,952	+				-0.4
102,953	-				+2.4
102,961	+				-1.9
102,984	+				-0.8
102,984	+				+1.1
102,984	+				+1.6
102,985	-				+3.7
103,357	-				-1.6